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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF 3-DEHYDROQUINATE SYNTHASE (DHQS) IN COMPLEX WITH ZN2+ AND CARBAPHOSPHONATE
Keywords SHIKIMATE PATHWAY, AROMATIC AMINO ACID BIOSYNTHESIS, DHQS, CLOSED FORM, FORM C, DOMAIN MOVEMENT, CYCLASE, LYASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1NVB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   3-DEHYDROQUINATE SYNTHASE  A 390 2992 0
2  Protein   3-DEHYDROQUINATE SYNTHASE  B 391 3001 0
3  Ligand   3-DEHYDROQUINATE SYNTHASE  A 5 0 64
4  Ligand   3-DEHYDROQUINATE SYNTHASE  B 2 0 18
5 Water     209 0 209
total       997 5993 291

Proteins
Unit 1 ASN3 PRO4 THR5 LYS6 ILE7 SER8 ILE9 LEU10 GLY11 ARG12 GLU13 SER14 ILE15 ILE16 ALA17 ASP18 PHE19 GLY20 LEU21 TRP22 ARG23 ASN24 TYR25 VAL26 ALA27 LYS28 ASP29 LEU30 ILE31 SER32 ASP33 CYS34 SER35 SER36 THR37 THR38 TYR39 VAL40 LEU41 VAL42 THR43 ASP44 THR45 ASN46 ILE47 GLY48 SER49 ILE50 TYR51 THR52 PRO53 SER54 PHE55 GLU56 GLU57 ALA58 PHE59 ARG60 LYS61 ARG62 ALA63 ALA64 GLU65 ILE66 THR67 PRO68 SER69 PRO70 ARG71 LEU72 LEU73 ILE74 TYR75 ASN76 ARG77 PRO78 PRO79 GLY80 GLU81 VAL82 SER83 LYS84 SER85 ARG86 GLN87 THR88 LYS89 ALA90 ASP91 ILE92 GLU93 ASP94 TRP95 MET96 LEU97 SER98 GLN99 ASN100 PRO101 PRO102 CYS103 GLY104 ARG105 ASP106 THR107 VAL108 VAL109 ILE110 ALA111 LEU112 GLY113 GLY114 GLY115 VAL116 ILE117 GLY118 ASP119 LEU120 THR121 GLY122 PHE123 VAL124 ALA125 SER126 THR127 TYR128 MET129 ARG130 GLY131 VAL132 ARG133 TYR134 VAL135 GLN136 VAL137 PRO138 THR139 THR140 LEU141 LEU142 ALA143 MET144 VAL145 ASP146 SER147 SER148 ILE149 GLY150 GLY151 LYS152 THR153 ALA154 ILE155 ASP156 THR157 PRO158 LEU159 GLY160 LYS161 ASN162 LEU163 ILE164 GLY165 ALA166 ILE167 TRP168 GLN169 PRO170 THR171 LYS172 ILE173 TYR174 ILE175 ASP176 LEU177 GLU178 PHE179 LEU180 GLU181 THR182 LEU183 PRO184 VAL185 ARG186 GLU187 PHE188 ILE189 ASN190 GLY191 MET192 ALA193 GLU194 VAL195 ILE196 LYS197 THR198 ALA199 ALA200 ILE201 SER202 SER203 GLU204 GLU205 GLU206 PHE207 THR208 ALA209 LEU210 GLU211 GLU212 ASN213 ALA214 GLU215 THR216 ILE217 LEU218 LYS219 ALA220 VAL221 ARG222 ARG223 GLU224 VAL225 THR226 PRO227 GLY228 GLU229 HIS230 ARG231 PHE232 GLU233 GLY234 THR235 GLU236 GLU237 ILE238 LEU239 LYS240 ALA241 ARG242 ILE243 LEU244 ALA245 SER246 ALA247 ARG248 HIS249 LYS250 ALA251 TYR252 VAL253 VAL254 SER255 ALA256 ASP257 GLU258 ARG259 GLU260 GLY261 GLY262 LEU263 ARG264 ASN265 LEU266 LEU267 ASN268 TRP269 GLY270 HIS271 SER272 ILE273 GLY274 HIS275 ALA276 ILE277 GLU278 ALA279 ILE280 LEU281 THR282 PRO283 GLN284 ILE285 LEU286 HIS287 GLY288 GLU289 CYS290 VAL291 ALA292 ILE293 GLY294 MET295 VAL296 LYS297 GLU298 ALA299 GLU300 LEU301 ALA302 ARG303 HIS304 LEU305 GLY306 ILE307 LEU308 LYS309 GLY310 VAL311 ALA312 VAL313 SER314 ARG315 ILE316 VAL317 LYS318 CYS319 LEU320 ALA321 ALA322 TYR323 GLY324 LEU325 PRO326 THR327 SER328 LEU329 LYS330 ASP331 ALA332 ARG333 ILE334 ARG335 LYS336 LEU337 THR338 ALA339 GLY340 LYS341 HIS342 CYS343 SER344 VAL345 ASP346 GLN347 LEU348 MET349 PHE350 ASN351 MET352 ALA353 LEU354 ASP355 LYS356 LYS357 ASN358 ASP359 GLY360 PRO361 LYS362 LYS363 LYS364 ILE365 VAL366 LEU367 LEU368 SER369 ALA370 ILE371 GLY372 THR373 PRO374 TYR375 GLU376 THR377 ARG378 ALA379 SER380 VAL381 VAL382 ALA383 ASN384 GLU385 ASP386 ILE387 ARG388 VAL389 VAL390 LEU391 ALA392
Unit 2 ASN3 PRO4 THR5 LYS6 ILE7 SER8 ILE9 LEU10 GLY11 ARG12 GLU13 SER14 ILE15 ILE16 ALA17 ASP18 PHE19 GLY20 LEU21 TRP22 ARG23 ASN24 TYR25 VAL26 ALA27 LYS28 ASP29 LEU30 ILE31 SER32 ASP33 CYS34 SER35 SER36 THR37 THR38 TYR39 VAL40 LEU41 VAL42 THR43 ASP44 THR45 ASN46 ILE47 GLY48 SER49 ILE50 TYR51 THR52 PRO53 SER54 PHE55 GLU56 GLU57 ALA58 PHE59 ARG60 LYS61 ARG62 ALA63 ALA64 GLU65 ILE66 THR67 PRO68 SER69 PRO70 ARG71 LEU72 LEU73 ILE74 TYR75 ASN76 ARG77 PRO78 PRO79 GLY80 GLU81 VAL82 SER83 LYS84 SER85 ARG86 GLN87 THR88 LYS89 ALA90 ASP91 ILE92 GLU93 ASP94 TRP95 MET96 LEU97 SER98 GLN99 ASN100 PRO101 PRO102 CYS103 GLY104 ARG105 ASP106 THR107 VAL108 VAL109 ILE110 ALA111 LEU112 GLY113 GLY114 GLY115 VAL116 ILE117 GLY118 ASP119 LEU120 THR121 GLY122 PHE123 VAL124 ALA125 SER126 THR127 TYR128 MET129 ARG130 GLY131 VAL132 ARG133 TYR134 VAL135 GLN136 VAL137 PRO138 THR139 THR140 LEU141 LEU142 ALA143 MET144 VAL145 ASP146 SER147 SER148 ILE149 GLY150 GLY151 LYS152 THR153 ALA154 ILE155 ASP156 THR157 PRO158 LEU159 GLY160 LYS161 ASN162 LEU163 ILE164 GLY165 ALA166 ILE167 TRP168 GLN169 PRO170 THR171 LYS172 ILE173 TYR174 ILE175 ASP176 LEU177 GLU178 PHE179 LEU180 GLU181 THR182 LEU183 PRO184 VAL185 ARG186 GLU187 PHE188 ILE189 ASN190 GLY191 MET192 ALA193 GLU194 VAL195 ILE196 LYS197 THR198 ALA199 ALA200 ILE201 SER202 SER203 GLU204 GLU205 GLU206 PHE207 THR208 ALA209 LEU210 GLU211 GLU212 ASN213 ALA214 GLU215 THR216 ILE217 LEU218 LYS219 ALA220 VAL221 ARG222 ARG223 GLU224 VAL225 THR226 PRO227 GLY228 GLU229 HIS230 ARG231 PHE232 GLU233 GLY234 THR235 GLU236 GLU237 ILE238 LEU239 LYS240 ALA241 ARG242 ILE243 LEU244 ALA245 SER246 ALA247 ARG248 HIS249 LYS250 ALA251 TYR252 VAL253 VAL254 SER255 ALA256 ASP257 GLU258 ARG259 GLU260 GLY261 GLY262 LEU263 ARG264 ASN265 LEU266 LEU267 ASN268 TRP269 GLY270 HIS271 SER272 ILE273 GLY274 HIS275 ALA276 ILE277 GLU278 ALA279 ILE280 LEU281 THR282 PRO283 GLN284 ILE285 LEU286 HIS287 GLY288 GLU289 CYS290 VAL291 ALA292 ILE293 GLY294 MET295 VAL296 LYS297 GLU298 ALA299 GLU300 LEU301 ALA302 ARG303 HIS304 LEU305 GLY306 ILE307 LEU308 LYS309 GLY310 VAL311 ALA312 VAL313 SER314 ARG315 ILE316 VAL317 LYS318 CYS319 LEU320 ALA321 ALA322 TYR323 GLY324 LEU325 PRO326 THR327 SER328 LEU329 LYS330 ASP331 ALA332 ARG333 ILE334 ARG335 LYS336 LEU337 THR338 ALA339 GLY340 LYS341 HIS342 CYS343 SER344 VAL345 ASP346 GLN347 LEU348 MET349 PHE350 ASN351 MET352 ALA353 LEU354 ASP355 LYS356 LYS357 ASN358 ASP359 GLY360 PRO361 LYS362 LYS363 LYS364 ILE365 VAL366 LEU367 LEU368 SER369 ALA370 ILE371 GLY372 THR373 PRO374 TYR375 GLU376 THR377 ARG378 ALA379 SER380 VAL381 VAL382 ALA383 ASN384 GLU385 ASP386 ILE387 ARG388 VAL389 VAL390 LEU391 ALA392 PRO393

Ligands
Unit 3 NAD400 CRB500 ZN600 CL604 CL605
Unit 4 CRB501 ZN601

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany