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Sequence, Chains, Asymmetric and Biological Units

Title NODAMURA VIRUS
Keywords INSECT VIRUS, NODAMURA VIRUS, COAT PROTEIN, ICOSAHEDRAL VIRU
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1NOV     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NODAMURA VIRUS COAT PROTEINS  A 309 2300 0
2  Protein   NODAMURA VIRUS COAT PROTEINS  D 20 149 0
3  Protein   NODAMURA VIRUS COAT PROTEINS  B 309 2297 0
4  Protein   NODAMURA VIRUS COAT PROTEINS  E 17 134 0
5  Protein   NODAMURA VIRUS COAT PROTEINS  C 324 2434 0
6  Protein   NODAMURA VIRUS COAT PROTEINS  F 17 137 0
total       996 7451 0
Proteins
Unit 1 ASN55 MET56 LEU57 LYS58 MET59 SER60 ALA61 PRO62 GLY63 LEU64 ASP65 PHE66 LEU67 LYS68 CYS69 ALA70 PHE71 ALA72 SER73 PRO74 ASP75 PHE76 SER77 THR78 ASP79 PRO80 GLY81 LYS82 GLY83 ILE84 PRO85 ASP86 LYS87 PHE88 GLN89 GLY90 LEU91 VAL92 LEU93 PRO94 LYS95 LYS96 HIS97 CYS98 LEU99 THR100 GLN101 SER102 ILE103 THR104 PHE105 THR106 PRO107 GLY108 LYS109 GLN110 THR111 MET112 LEU113 LEU114 VAL115 ALA116 PRO117 ILE118 PRO119 GLY120 ILE121 ALA122 CYS123 LEU124 LYS125 ALA126 GLU127 ALA128 ASN129 VAL130 GLY131 ALA132 SER133 PHE135 SER136 GLY137 VAL138 PRO139 LEU140 ALA141 SER142 VAL143 GLU144 PHE145 PRO146 GLY147 PHE148 ASP149 GLN150 LEU151 PHE152 GLY153 THR154 SER155 ALA156 THR157 ASP158 THR159 ALA160 ALA161 ASN162 VAL163 THR164 ALA165 PHE166 ARG167 TYR168 ALA169 SER170 MET171 ALA172 ALA173 GLY174 VAL175 TYR176 PRO177 THR178 SER179 ASN180 LEU181 MET182 GLN183 PHE184 ALA185 GLY186 SER187 ILE188 GLN189 VAL190 TYR191 LYS192 ILE193 PRO194 LEU195 LYS196 GLN197 VAL198 LEU199 ASN200 SER201 TYR202 SER203 GLN204 THR205 VAL206 THR207 THR208 ASN209 LEU210 ALA211 GLN212 ASN213 THR214 ILE215 ALA216 ILE217 ASP218 GLY219 LEU220 GLU221 ALA222 LEU223 ASP224 ALA225 LEU226 PRO227 ASN228 ASN229 ASN230 TYR231 SER232 GLY233 SER234 PHE235 ILE236 GLU237 GLY238 CYS239 TYR240 SER241 GLN242 SER243 VAL244 CYS245 ASN246 GLU247 PRO248 GLU249 PHE250 GLU251 PHE252 HIS253 PRO254 ILE255 MET256 GLU257 GLY258 TYR259 ALA260 SER261 VAL262 PRO263 PRO264 ALA265 ASN266 VAL267 THR268 ASN269 ALA270 GLN271 ALA272 SER273 MET274 PHE275 THR276 ASN277 LEU278 THR279 PHE280 SER281 GLY285 ALA286 ARG287 TYR288 THR289 GLY290 LEU291 GLY292 ASP293 MET294 ASP295 ALA296 ILE297 ALA298 ILE299 LEU300 VAL301 THR302 THR303 PRO304 THR305 GLY306 ALA307 VAL308 ASN309 THR310 ALA311 VAL312 LEU313 LYS314 VAL315 TRP316 ALA317 CYS318 VAL319 GLU320 TYR321 ARG322 PRO323 ASN324 PRO325 ASN326 SER327 THR328 LEU329 TYR330 GLU331 PHE332 ALA333 ARG334 GLU335 SER336 PRO337 ALA338 ASN339 ASP340 GLU341 TYR342 ALA343 LEU344 ALA345 ALA346 TYR347 ARG348 LYS349 ILE350 ALA351 ARG352 ASP353 ILE354 PRO355 ILE356 ALA357 VAL358 ALA359 CYS360 LYS361 ASP362 ASN363 ALA501 VAL502 PRO503 PRO504
Unit 2 ALA364 THR365 PHE366 TRP367 GLU368 ARG369 VAL370 ARG371 SER372 ILE373 LEU374 LYS375 SER376 GLY377 LEU378 ASN379 PHE380 ALA381 SER382 THR383
Unit 3 ASN55 MET56 LEU57 LYS58 MET59 SER60 ALA61 PRO62 GLY63 LEU64 ASP65 PHE66 LEU67 LYS68 CYS69 ALA70 PHE71 ALA72 SER73 PRO74 ASP75 PHE76 SER77 THR78 ASP79 PRO80 GLY81 LYS82 GLY83 ILE84 PRO85 ASP86 LYS87 PHE88 GLN89 GLY90 LEU91 VAL92 LEU93 PRO94 LYS95 LYS96 HIS97 CYS98 LEU99 THR100 GLN101 SER102 ILE103 THR104 PHE105 THR106 PRO107 GLY108 LYS109 GLN110 THR111 MET112 LEU113 LEU114 VAL115 ALA116 PRO117 ILE118 PRO119 GLY120 ILE121 ALA122 CYS123 LEU124 LYS125 ALA126 GLU127 ALA128 ASN129 VAL130 GLY131 ALA132 SER133 PHE135 SER136 GLY137 VAL138 PRO139 LEU140 ALA141 SER142 VAL143 GLU144 PHE145 PRO146 GLY147 PHE148 ASP149 GLN150 LEU151 PHE152 GLY153 THR154 SER155 ALA156 THR157 ASP158 THR159 ALA160 ALA161 ASN162 VAL163 THR164 ALA165 PHE166 ARG167 TYR168 ALA169 SER170 MET171 ALA172 ALA173 GLY174 VAL175 TYR176 PRO177 THR178 SER179 ASN180 LEU181 MET182 GLN183 PHE184 ALA185 GLY186 SER187 ILE188 GLN189 VAL190 TYR191 LYS192 ILE193 PRO194 LEU195 LYS196 GLN197 VAL198 LEU199 ASN200 SER201 TYR202 SER203 GLN204 THR205 VAL206 THR207 THR208 ASN209 LEU210 ALA211 GLN212 ASN213 THR214 ILE215 ALA216 ILE217 ASP218 GLY219 LEU220 GLU221 ALA222 LEU223 ASP224 ALA225 LEU226 PRO227 ASN228 ASN229 ASN230 TYR231 SER232 GLY233 SER234 PHE235 ILE236 GLU237 GLY238 CYS239 TYR240 SER241 GLN242 SER243 VAL244 CYS245 ASN246 GLU247 PRO248 GLU249 PHE250 GLU251 PHE252 HIS253 PRO254 ILE255 MET256 GLU257 GLY258 TYR259 ALA260 SER261 VAL262 PRO263 PRO264 ALA265 ASN266 VAL267 THR268 ASN269 ALA270 GLN271 ALA272 SER273 MET274 PHE275 THR276 ASN277 LEU278 THR279 PHE280 SER281 GLY285 ALA286 ARG287 TYR288 THR289 GLY290 LEU291 GLY292 ASP293 MET294 ASP295 ALA296 ILE297 ALA298 ILE299 LEU300 VAL301 THR302 THR303 PRO304 THR305 GLY306 ALA307 VAL308 ASN309 THR310 ALA311 VAL312 LEU313 LYS314 VAL315 TRP316 ALA317 CYS318 VAL319 GLU320 TYR321 ARG322 PRO323 ASN324 PRO325 ASN326 SER327 THR328 LEU329 TYR330 GLU331 PHE332 ALA333 ARG334 GLU335 SER336 PRO337 ALA338 ASN339 ASP340 GLU341 TYR342 ALA343 LEU344 ALA345 ALA346 TYR347 ARG348 LYS349 ILE350 ALA351 ARG352 ASP353 ILE354 PRO355 ILE356 ALA357 VAL358 ALA359 CYS360 LYS361 ASP362 ASN363 ALA501 VAL502 PRO503 PRO504
Unit 4 ALA364 THR365 PHE366 TRP367 GLU368 ARG369 VAL370 ARG371 SER372 ILE373 LEU374 LYS375 SER376 GLY377 LEU378 ASN379 PHE380
Unit 5 ARG13 ARG14 ARG15 ALA16 ALA17 PRO18 ARG19 GLN20 GLN21 GLN22 ARG23 GLN24 GLN25 SER26 ASN27 ARG28 ALA29 LEU57 LYS58 MET59 SER60 ALA61 PRO62 GLY63 LEU64 ASP65 PHE66 LEU67 LYS68 CYS69 ALA70 PHE71 ALA72 SER73 PRO74 ASP75 PHE76 SER77 THR78 ASP79 PRO80 GLY81 LYS82 GLY83 ILE84 PRO85 ASP86 LYS87 PHE88 GLN89 GLY90 LEU91 VAL92 LEU93 PRO94 LYS95 LYS96 HIS97 CYS98 LEU99 THR100 GLN101 SER102 ILE103 THR104 PHE105 THR106 PRO107 GLY108 LYS109 GLN110 THR111 MET112 LEU113 LEU114 VAL115 ALA116 PRO117 ILE118 PRO119 GLY120 ILE121 ALA122 CYS123 LEU124 LYS125 ALA126 GLU127 ALA128 ASN129 VAL130 GLY131 ALA132 SER133 PHE135 SER136 GLY137 VAL138 PRO139 LEU140 ALA141 SER142 VAL143 GLU144 PHE145 PRO146 GLY147 PHE148 ASP149 GLN150 LEU151 PHE152 GLY153 THR154 SER155 ALA156 THR157 ASP158 THR159 ALA160 ALA161 ASN162 VAL163 THR164 ALA165 PHE166 ARG167 TYR168 ALA169 SER170 MET171 ALA172 ALA173 GLY174 VAL175 TYR176 PRO177 THR178 SER179 ASN180 LEU181 MET182 GLN183 PHE184 ALA185 GLY186 SER187 ILE188 GLN189 VAL190 TYR191 LYS192 ILE193 PRO194 LEU195 LYS196 GLN197 VAL198 LEU199 ASN200 SER201 TYR202 SER203 GLN204 THR205 VAL206 THR207 THR208 ASN209 LEU210 ALA211 GLN212 ASN213 THR214 ILE215 ALA216 ILE217 ASP218 GLY219 LEU220 GLU221 ALA222 LEU223 ASP224 ALA225 LEU226 PRO227 ASN228 ASN229 ASN230 TYR231 SER232 GLY233 SER234 PHE235 ILE236 GLU237 GLY238 CYS239 TYR240 SER241 GLN242 SER243 VAL244 CYS245 ASN246 GLU247 PRO248 GLU249 PHE250 GLU251 PHE252 HIS253 PRO254 ILE255 MET256 GLU257 GLY258 TYR259 ALA260 SER261 VAL262 PRO263 PRO264 ALA265 ASN266 VAL267 THR268 ASN269 ALA270 GLN271 ALA272 SER273 MET274 PHE275 THR276 ASN277 LEU278 THR279 PHE280 SER281 GLY285 ALA286 ARG287 TYR288 THR289 GLY290 LEU291 GLY292 ASP293 MET294 ASP295 ALA296 ILE297 ALA298 ILE299 LEU300 VAL301 THR302 THR303 PRO304 THR305 GLY306 ALA307 VAL308 ASN309 THR310 ALA311 VAL312 LEU313 LYS314 VAL315 TRP316 ALA317 CYS318 VAL319 GLU320 TYR321 ARG322 PRO323 ASN324 PRO325 ASN326 SER327 THR328 LEU329 TYR330 GLU331 PHE332 ALA333 ARG334 GLU335 SER336 PRO337 ALA338 ASN339 ASP340 GLU341 TYR342 ALA343 LEU344 ALA345 ALA346 TYR347 ARG348 LYS349 ILE350 ALA351 ARG352 ASP353 ILE354 PRO355 ILE356 ALA357 VAL358 ALA359 CYS360 LYS361 ASP362 ASN363 ALA501 VAL502 PRO503 PRO504
Unit 6 ALA364 THR365 PHE366 TRP367 GLU368 ARG369 VAL370 ARG371 SER372 ILE373 LEU374 LYS375 SER376 GLY377 LEU378 ASN379 PHE380
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany