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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN THYMIDYLATE KINASE WITH D4TMP + A
Keywords THYMIDYLATE KINASE, P-LOOP, D4TMP, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1NN3     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SIMILAR TO THYMIDYLATE KINASE (DTMP KINASE)  A 209 1641 0
2  DNA    A 4 0 49
3 Water     315 0 315
total       528 1641 364

Proteins
Unit 1 ARG4 ARG5 GLY6 ALA7 LEU8 ILE9 VAL10 LEU11 GLU12 GLY13 VAL14 ASP15 ARG16 ALA17 GLY18 LYS19 SER20 THR21 GLN22 SER23 ARG24 LYS25 LEU26 VAL27 GLU28 ALA29 LEU30 CYS31 ALA32 ALA33 GLY34 HIS35 ARG36 ALA37 GLU38 LEU39 LEU40 ARG41 PHE42 PRO43 GLU44 ARG45 SER46 THR47 GLU48 ILE49 GLY50 LYS51 LEU52 LEU53 SER54 SER55 TYR56 LEU57 GLN58 LYS59 LYS60 SER61 ASP62 VAL63 GLU64 ASP65 HIS66 SER67 VAL68 HIS69 LEU70 LEU71 PHE72 SER73 ALA74 ASN75 ARG76 TRP77 GLU78 GLN79 VAL80 PRO81 LEU82 ILE83 LYS84 GLU85 LYS86 LEU87 SER88 GLN89 GLY90 VAL91 THR92 LEU93 VAL94 VAL95 ASP96 ARG97 TYR98 ALA99 PHE100 SER101 GLY102 VAL103 ALA104 PHE105 THR106 GLY107 ALA108 LYS109 GLU110 ASN111 PHE112 SER113 LEU114 ASP115 TRP116 CYS117 LYS118 GLN119 PRO120 ASP121 VAL122 GLY123 LEU124 PRO125 LYS126 PRO127 ASP128 LEU129 VAL130 LEU131 PHE132 LEU133 GLN134 LEU135 GLN136 LEU137 ALA138 ASP139 ALA140 ALA141 LYS142 ARG143 GLY144 ALA145 PHE146 GLY147 HIS148 GLU149 ARG150 TYR151 GLU152 ASN153 GLY154 ALA155 PHE156 GLN157 GLU158 ARG159 ALA160 LEU161 ARG162 CYS163 PHE164 HIS165 GLN166 LEU167 MET168 LYS169 ASP170 THR171 THR172 LEU173 ASN174 TRP175 LYS176 MET177 VAL178 ASP179 ALA180 SER181 LYS182 SER183 ILE184 GLU185 ALA186 VAL187 HIS188 GLU189 ASP190 ILE191 ARG192 VAL193 LEU194 SER195 GLU196 ASP197 ALA198 ILE199 ALA200 THR201 ALA202 THR203 GLU204 LYS205 PRO206 LEU207 GLY208 GLU209 LEU210 TRP211 LYS212

Nucleic acids
Unit 2 2DT301 ADP302 MG401 MG402

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany