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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE TRAFFIC ATPASE OF THE HELICOBACTER TYPE IV SECRETION SYSTEM IN COMPLEX WITH ATPGAMMAS
Keywords VIRB11 ATPASE, BACTERIAL TYPE IV SECRETION, ATPGAMMAS, HP052 HELICOBACTER PYLORI, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1NLY     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   VIRB11 HOMOLOG  A 323 2505 48
2  Protein   VIRB11 HOMOLOG  B 323 2502 48
3  Ligand   VIRB11 HOMOLOG  A 2 0 32
4  Ligand   VIRB11 HOMOLOG  B 3 0 64
5 Water     42 0 42
total       693 5007 234
Proteins
Unit 1 LEU6 SER7 ALA8 GLU9 ASP10 LYS11 LYS12 PHE13 LEU14 GLU15 VAL16 GLU17 ARG18 ALA19 LEU20 LYS21 GLU22 ALA23 ALA24 LEU25 ASN26 PRO27 LEU28 ARG29 HIS30 ALA31 THR32 GLU33 GLU34 LEU35 PHE36 GLY37 ASP38 PHE39 LEU40 LYS41 MSE42 GLU43 ASN44 ILE45 THR46 GLU47 ILE48 CYS49 TYR50 ASN51 GLY52 ASN53 LYS54 VAL55 VAL56 TRP57 VAL58 LEU59 LYS60 ASN61 ASN62 GLY63 GLU64 TRP65 GLN66 PRO67 PHE68 ASP69 VAL70 ARG71 ASP72 ARG73 LYS74 ALA75 PHE76 SER77 LEU78 SER79 ARG80 LEU81 MSE82 HIS83 PHE84 ALA85 ARG86 CYS87 CYS88 ALA89 SER90 PHE91 LYS92 LYS93 LYS94 THR95 ILE96 ASP97 ASN98 TYR99 GLU100 ASN101 PRO102 ILE103 LEU104 SER105 SER106 ASN107 LEU108 ALA109 ASN110 GLY111 GLU112 ARG113 VAL114 GLN115 ILE116 VAL117 LEU118 SER119 PRO120 VAL121 THR122 VAL123 ASN124 ASP125 GLU126 THR127 ILE128 SER129 ILE130 SER131 ILE132 ARG133 ILE134 PRO135 SER136 LYS137 THR138 THR139 TYR140 PRO141 HIS142 SER143 PHE144 PHE145 GLU146 GLU147 GLN148 GLY149 PHE150 TYR151 ASN152 LEU153 LEU154 ASP155 ASN156 LYS157 GLU158 GLN159 ALA160 ILE161 SER162 ALA163 ILE164 LYS165 ASP166 GLY167 ILE168 ALA169 ILE170 GLY171 LYS172 ASN173 VAL174 ILE175 VAL176 CYS177 GLY178 GLY179 THR180 GLY181 SER182 GLY183 LYS184 THR185 THR186 TYR187 ILE188 LYS189 SER190 ILE191 MSE192 GLU193 PHE194 ILE195 PRO196 LYS197 GLU198 GLU199 ARG200 ILE201 ILE202 SER203 ILE204 GLU205 ASP206 THR207 GLU208 GLU209 ILE210 VAL211 PHE212 LYS213 HIS214 HIS215 LYS216 ASN217 TYR218 THR219 GLN220 LEU221 PHE222 PHE223 GLY224 GLY225 ASN226 ILE227 THR228 SER229 ALA230 ASP231 CYS232 LEU233 LYS234 SER235 CYS236 LEU237 ARG238 MSE239 ARG240 PRO241 ASP242 ARG243 ILE244 ILE245 LEU246 GLY247 GLU248 LEU249 ARG250 SER251 SER252 GLU253 ALA254 TYR255 ASP256 PHE257 TYR258 ASN259 VAL260 LEU261 CYS262 SER263 GLY264 HIS265 LYS266 GLY267 THR268 LEU269 THR270 THR271 LEU272 HIS273 ALA274 GLY275 SER276 SER277 GLU278 GLU279 ALA280 PHE281 ILE282 ARG283 LEU284 ALA285 ASN286 MSE287 SER288 SER289 SER290 ASN291 SER292 ALA293 ALA294 ARG295 ASN296 ILE297 LYS298 PHE299 GLU300 SER301 LEU302 ILE303 GLU304 GLY305 PHE306 LYS307 ASP308 LEU309 ILE310 ASP311 MSE312 ILE313 VAL314 HIS315 ILE316 ASN317 HIS318 HIS319 LYS320 GLN321 CYS322 ASP323 GLU324 PHE325 TYR326 ILE327 LYS328
Unit 2 LEU6 SER7 ALA8 GLU9 ASP10 LYS11 LYS12 PHE13 LEU14 GLU15 VAL16 GLU17 ARG18 ALA19 LEU20 LYS21 GLU22 ALA23 ALA24 LEU25 ASN26 PRO27 LEU28 ARG29 HIS30 ALA31 THR32 GLU33 GLU34 LEU35 PHE36 GLY37 ASP38 PHE39 LEU40 LYS41 MSE42 GLU43 ASN44 ILE45 THR46 GLU47 ILE48 CYS49 TYR50 ASN51 GLY52 ASN53 LYS54 VAL55 VAL56 TRP57 VAL58 LEU59 LYS60 ASN61 ASN62 GLY63 GLU64 TRP65 GLN66 PRO67 PHE68 ASP69 VAL70 ARG71 ASP72 ARG73 LYS74 ALA75 PHE76 SER77 LEU78 SER79 ARG80 LEU81 MSE82 HIS83 PHE84 ALA85 ARG86 CYS87 CYS88 ALA89 SER90 PHE91 LYS92 LYS93 LYS94 THR95 ILE96 ASP97 ASN98 TYR99 GLU100 ASN101 PRO102 ILE103 LEU104 SER105 SER106 ASN107 LEU108 ALA109 ASN110 GLY111 GLU112 ARG113 VAL114 GLN115 ILE116 VAL117 LEU118 SER119 PRO120 VAL121 THR122 VAL123 ASN124 ASP125 GLU126 THR127 ILE128 SER129 ILE130 SER131 ILE132 ARG133 ILE134 PRO135 SER136 LYS137 THR138 THR139 TYR140 PRO141 HIS142 SER143 PHE144 PHE145 GLU146 GLU147 GLN148 GLY149 PHE150 TYR151 ASN152 LEU153 LEU154 ASP155 ASN156 LYS157 GLU158 GLN159 ALA160 ILE161 SER162 ALA163 ILE164 LYS165 ASP166 GLY167 ILE168 ALA169 ILE170 GLY171 LYS172 ASN173 VAL174 ILE175 VAL176 CYS177 GLY178 GLY179 THR180 GLY181 SER182 GLY183 LYS184 THR185 THR186 TYR187 ILE188 LYS189 SER190 ILE191 MSE192 GLU193 PHE194 ILE195 PRO196 LYS197 GLU198 GLU199 ARG200 ILE201 ILE202 SER203 ILE204 GLU205 ASP206 THR207 GLU208 GLU209 ILE210 VAL211 PHE212 LYS213 HIS214 HIS215 LYS216 ASN217 TYR218 THR219 GLN220 LEU221 PHE222 PHE223 GLY224 GLY225 ASN226 ILE227 THR228 SER229 ALA230 ASP231 CYS232 LEU233 LYS234 SER235 CYS236 LEU237 ARG238 MSE239 ARG240 PRO241 ASP242 ARG243 ILE244 ILE245 LEU246 GLY247 GLU248 LEU249 ARG250 SER251 SER252 GLU253 ALA254 TYR255 ASP256 PHE257 TYR258 ASN259 VAL260 LEU261 CYS262 SER263 GLY264 HIS265 LYS266 GLY267 THR268 LEU269 THR270 THR271 LEU272 HIS273 ALA274 GLY275 SER276 SER277 GLU278 GLU279 ALA280 PHE281 ILE282 ARG283 LEU284 ALA285 ASN286 MSE287 SER288 SER289 SER290 ASN291 SER292 ALA293 ALA294 ARG295 ASN296 ILE297 LYS298 PHE299 GLU300 SER301 LEU302 ILE303 GLU304 GLY305 PHE306 LYS307 ASP308 LEU309 ILE310 ASP311 MSE312 ILE313 VAL314 HIS315 ILE316 ASN317 HIS318 HIS319 LYS320 GLN321 CYS322 ASP323 GLU324 PHE325 TYR326 ILE327 LYS328
Ligands
Unit 3 MG401 AGS402
Unit 4 SO4401 AGS402 2PE403
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany