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Sequence, Chains, Asymmetric and Biological Units

Title VND/NK-2 HOMEODOMAIN/DNA COMPLEX, NMR, MINIMIZED AVERAGE STRUCTURE
Keywords HOMEODOMAIN, HOMEOBOX, DNA-BINDING PROTEIN, EMBRYONIC DEVELOPMENT, COMPLEX (HOMEODOMAIN/DNA), DNA BINDING PROTEIN/DNA COMPLEX
Experiment NMR
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1NK3     released     available     available     Quaternary Structure Server  
NDB   1NK3                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   DNA (5'- D(*TP*GP*TP*GP*TP*CP*AP*AP*GP*TP*GP*GP*CP*TP*GP*T)-3')  A 16 513 0
2  Other macromolecule   DNA (5'- D(*AP*CP*AP*GP*CP*CP*AP*CP*TP*TP*GP*AP*CP*AP*CP*A)-3')  B 16 499 0
3  Protein   HOMEOBOX PROTEIN VND  P 63 1148 0
total       95 2160 0

Proteins
Unit 3 LYS100 LYS101 ARG102 LYS103 ARG104 ARG105 VAL106 LEU107 PHE108 THR109 LYS110 ALA111 GLN112 THR113 TYR114 GLU115 LEU116 GLU117 ARG118 ARG119 PHE120 ARG121 GLN122 GLN123 ARG124 TYR125 LEU126 SER127 ALA128 PRO129 GLU130 ARG131 GLU132 HIS133 LEU134 ALA135 SER136 LEU137 ILE138 ARG139 LEU140 THR141 PRO142 THR143 GLN144 VAL145 LYS146 ILE147 TRP148 PHE149 GLN150 ASN151 HIS152 ARG153 TYR154 LYS155 THR156 LYS157 ARG158 ALA159 GLN160 ASN161 GLU162

Other macromolecules
Unit 1 DT1 DG2 DT3 DG4 DT5 DC6 DA7 DA8 DG9 DT10 DG11 DG12 DC13 DT14 DG15 DT16
Unit 2 DA17 DC18 DA19 DG20 DC21 DC22 DA23 DC24 DT25 DT26 DG27 DA28 DC29 DA30 DC31 DA32

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany