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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF A TL/CD8AA COMPLEX AT 2.1A RESOLUTION:IMPLICATIONS FOR MEMORY T CELL GENERATION, CO-RE PREFERENCE AND AFFINITY
Keywords IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1NEZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 274 2237 0
2  Protein   BETA-2-MICROGLOBULIN  B 99 821 0
3  Protein   T-CELL SURFACE GLYCOPROTEIN CD8 ALPHA CHAIN  G 122 962 0
4  Protein   T-CELL SURFACE GLYCOPROTEIN CD8 ALPHA CHAIN  H 120 954 0
5  Ligand   T-CELL SURFACE GLYCOPROTEIN CD8 ALPHA CHAIN  G 2 0 28
6  Ligand   T-CELL SURFACE GLYCOPROTEIN CD8 ALPHA CHAIN  H 2 0 28
7 Water     164 0 164
total       783 4974 220

Proteins
Unit 1 GLY1 SER2 HIS3 SER4 LEU5 ARG6 TYR7 PHE8 TYR9 THR10 ALA11 LEU12 SER13 ARG14 PRO15 ALA16 ILE17 SER18 GLU19 PRO20 TRP21 TYR22 ILE23 ALA24 VAL25 GLY26 TYR27 LEU28 ASP29 ASP30 THR31 GLN32 PHE33 ALA34 ARG35 PHE36 ASP37 SER38 ALA39 GLY40 GLU41 THR42 GLY43 THR44 TYR45 LYS46 LEU47 SER48 ALA49 PRO50 TRP51 VAL52 GLU53 GLN54 GLU55 GLY56 PRO57 GLU58 TYR59 TRP60 ALA61 ARG62 GLU63 THR64 GLU65 ILE66 VAL67 THR68 SER69 ASN70 ALA71 GLN72 PHE73 PHE74 ARG75 GLU76 ASN77 LEU78 GLN79 THR80 MET81 LEU82 ASP83 TYR84 TYR85 ASN86 LEU87 SER88 GLN89 ASN90 GLY91 SER92 HIS93 THR94 ILE95 GLN96 VAL97 MET98 TYR99 GLY100 CYS101 GLU102 VAL103 GLU104 PHE105 PHE106 GLY107 SER108 LEU109 PHE110 ARG111 ALA112 TYR113 GLU114 GLN115 HIS116 GLY117 TYR118 ASP119 GLY120 GLN121 ASP122 TYR123 ILE124 ALA125 LEU126 ASN127 GLU128 ASP129 LEU130 LYS131 THR132 TRP133 THR134 ALA135 ALA136 ASP137 MET138 ALA139 ALA140 GLU141 ILE142 THR143 ARG144 SER145 LYS146 TRP147 GLU148 GLN149 ALA150 GLY151 TYR152 THR153 GLU154 LEU155 ARG156 ARG157 THR158 TYR159 LEU160 GLU161 GLY162 PRO163 CYS164 LYS165 ASP166 SER167 LEU168 LEU169 ARG170 TYR171 LEU172 GLU173 ASN174 ARG175 LYS176 LYS177 THR178 GLN179 GLU180 CYS181 THR182 ASP183 PRO184 PRO185 LYS186 THR187 HIS188 VAL189 THR190 HIS191 HIS192 ALA193 ARG194 PRO195 GLU196 GLY197 ASP198 VAL199 THR200 LEU201 ARG202 CYS203 TRP204 ALA205 LEU206 GLY207 PHE208 TYR209 PRO210 ALA211 HIS212 ILE213 THR214 LEU215 THR216 TRP217 GLN218 LEU219 ASN220 GLY221 GLU222 GLU223 LEU224 ILE225 GLN226 ASP227 THR228 GLU229 LEU230 VAL231 GLU232 THR233 ARG234 PRO235 ALA236 GLY237 ASP238 GLY239 THR240 PHE241 GLN242 LYS243 TRP244 ALA245 ALA246 VAL247 VAL248 VAL249 PRO250 SER251 GLY252 GLU253 GLU254 GLN255 LYS256 TYR257 THR258 CYS259 HIS260 VAL261 TYR262 HIS263 GLU264 GLY265 LEU266 PRO267 GLU268 PRO269 LEU270 THR271 LEU272 ARG273 TRP274
Unit 2 ILE1 GLN2 LYS3 THR4 PRO5 GLN6 ILE7 GLN8 VAL9 TYR10 SER11 ARG12 HIS13 PRO14 PRO15 GLU16 ASN17 GLY18 LYS19 PRO20 ASN21 ILE22 LEU23 ASN24 CYS25 TYR26 VAL27 THR28 GLN29 PHE30 HIS31 PRO32 PRO33 HIS34 ILE35 GLU36 ILE37 GLN38 MET39 LEU40 LYS41 ASN42 GLY43 LYS44 LYS45 ILE46 PRO47 LYS48 VAL49 GLU50 MET51 SER52 ASP53 MET54 SER55 PHE56 SER57 LYS58 ASP59 TRP60 SER61 PHE62 TYR63 ILE64 LEU65 ALA66 HIS67 THR68 GLU69 PHE70 THR71 PRO72 THR73 GLU74 THR75 ASP76 THR77 TYR78 ALA79 CYS80 ARG81 VAL82 LYS83 HIS84 ASP85 SER86 MET87 ALA88 GLU89 PRO90 LYS91 THR92 VAL93 TYR94 TRP95 ASP96 ARG97 ASP98 MET99
Unit 3 ALA4 PRO5 GLU6 LEU7 ARG8 ILE9 PHE10 PRO11 LYS12 LYS13 MET14 ASP15 ALA16 GLU17 LEU18 GLY19 GLN20 LYS21 VAL22 ASP23 LEU24 VAL25 CYS26 GLU27 VAL28 LEU29 GLY30 SER31 VAL32 SER33 GLN34 GLY35 CYS36 SER37 TRP38 LEU39 PHE40 GLN41 ASN42 SER43 SER44 SER45 LYS46 LEU47 PRO48 GLN49 PRO50 THR51 PHE52 VAL53 VAL54 TYR55 MET56 ALA57 SER58 SER59 HIS60 ASN61 LYS62 ILE63 THR64 TRP65 ASP66 GLU67 LYS68 LEU69 ASN70 SER71 SER72 LYS73 LEU74 PHE75 SER76 ALA77 MET78 ARG79 ASP80 THR81 ASN82 ASN83 LYS84 TYR85 VAL86 LEU87 THR88 LEU89 ASN90 LYS91 PHE92 SER93 LYS94 GLU95 ASN96 GLU97 GLY98 TYR99 TYR100 PHE101 CYS102 SER103 VAL104 ILE105 SER106 ASN107 SER108 VAL109 MET110 TYR111 PHE112 SER113 SER114 VAL115 VAL116 PRO117 VAL118 LEU119 GLN120 LYS121 VAL122 SER123 SER124 ALA125
Unit 4 LYS1 PRO2 GLN3 ALA4 PRO5 GLU6 LEU7 ARG8 ILE9 PHE10 PRO11 LYS12 LYS13 MET14 ASP15 ALA16 GLU17 LEU18 GLY19 GLN20 LYS21 VAL22 ASP23 LEU24 VAL25 CYS26 GLU27 VAL28 LEU29 GLY30 SER31 VAL32 SER33 GLN34 GLY35 CYS36 SER37 TRP38 LEU39 PHE40 GLN41 ASN42 SER43 SER44 SER45 LYS46 LEU47 PRO48 GLN49 PRO50 THR51 PHE52 VAL53 VAL54 TYR55 MET56 ALA57 SER58 SER59 HIS60 ASN61 LYS62 ILE63 THR64 TRP65 ASP66 GLU67 LYS68 LEU69 ASN70 SER71 SER72 LYS73 LEU74 PHE75 SER76 ALA77 MET78 ARG79 ASP80 THR81 ASN82 ASN83 LYS84 TYR85 VAL86 LEU87 THR88 LEU89 ASN90 LYS91 PHE92 SER93 LYS94 GLU95 ASN96 GLU97 GLY98 TYR99 TYR100 PHE101 CYS102 SER103 VAL104 ILE105 SER106 ASN107 SER108 VAL109 MET110 TYR111 PHE112 SER113 SER114 VAL115 VAL116 PRO117 VAL118 LEU119 GLN120

Ligands
Unit 5 NAG1042 NAG1070
Unit 6 NAG2042 NAG2070

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany