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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF SCSKP1-SCCDC4-CPD PEPTIDE COMPLEX
Keywords WD 40 DOMAIN, PHOSPHO-PEPTIDE COMPLEX, E3 UBIQUITIN LIGASE, CELL CYCLE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1NEX     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 129 1023 24
2  Protein   CDC4 PROTEIN  B 444 3534 48
3  Protein    C 130 1034 24
4  Protein   CDC4 PROTEIN  D 444 3534 48
5  Protein   GLL(TPO)PPQSG  E 4 22 11
6  Protein   GLL(TPO)PPQSG  F 8 50 11
7 Water     72 0 72
total       1231 9197 238
Proteins
Unit 1 SER4 ASN5 VAL6 VAL7 LEU8 VAL9 SER10 GLY11 GLU12 GLY13 GLU14 ARG15 PHE16 THR17 VAL18 ASP19 LYS20 LYS21 ILE22 ALA23 GLU24 ARG25 SER26 LEU27 LEU28 LEU29 LYS30 ASN31 TYR32 LEU33 ILE75 VAL76 MSE77 PRO78 VAL79 PRO80 ASN81 VAL82 ARG83 SER84 SER85 VAL86 LEU87 GLN88 LYS89 VAL90 ILE91 GLU92 TRP93 ALA94 GLU95 HIS96 HIS97 ARG98 ASP99 SER100 ASN101 PHE102 PRO103 VAL116 ASP117 SER118 TRP119 ASP120 ARG121 GLU122 PHE123 LEU124 LYS125 VAL126 ASP127 GLN128 GLU129 MSE130 LEU131 TYR132 GLU133 ILE134 ILE135 LEU136 ALA137 ALA138 ASN139 TYR140 LEU141 ASN142 ILE143 LYS144 PRO145 LEU146 LEU147 ASP148 ALA149 GLY150 CYS151 LYS152 VAL153 VAL154 ALA155 GLU156 MSE157 ILE158 ARG159 GLY160 ARG161 SER162 PRO163 GLU164 GLU165 ILE166 ARG167 ARG168 THR169 PHE170 ASN171 ILE172 VAL173 ASN174 ASP175 PHE176 THR177 PRO178 GLU179 GLU180 GLU181 ALA182 ALA183 ILE184 ARG185
Unit 2 LEU270 LYS271 ARG272 ASP273 LEU274 ILE275 THR276 SER277 LEU278 PRO279 PHE280 GLU281 ILE282 SER283 LEU284 LYS285 ILE286 PHE287 ASN288 TYR289 LEU290 GLN291 PHE292 GLU293 ASP294 ILE295 ILE296 ASN297 SER298 LEU299 GLY300 VAL301 SER302 GLN303 ASN304 TRP305 ASN306 LYS307 ILE308 ILE309 ARG310 LYS311 SER312 THR313 SER314 LEU315 TRP316 LYS317 LYS318 LEU319 LEU320 ILE321 SER322 GLU323 ASN324 PHE325 VAL326 SER327 PRO328 LYS329 GLY330 PHE331 ASN332 SER333 LEU334 ASN335 LEU336 LYS337 LEU338 SER339 GLN340 LYS341 TYR342 PRO343 LYS344 LEU345 SER346 GLN347 GLN348 ASP349 ARG350 LEU351 ARG352 LEU353 SER354 PHE355 LEU356 GLU357 ASN358 ILE359 PHE360 ILE361 LEU362 LYS363 ASN364 TRP365 TYR366 ASN367 PRO368 LYS369 PHE370 VAL371 PRO372 GLN373 ARG374 THR375 THR376 LEU377 ARG378 GLY379 HIS380 MSE381 THR382 SER383 VAL384 ILE385 THR386 CYS387 LEU388 GLN389 PHE390 GLU391 ASP392 ASN393 TYR394 VAL395 ILE396 THR397 GLY398 ALA399 ASP400 ASP401 LYS402 MSE403 ILE404 ARG405 VAL406 TYR407 ASP408 SER409 ILE410 ASN411 LYS412 LYS413 PHE414 LEU415 LEU416 GLN417 LEU418 SER419 GLY420 HIS421 ASP422 GLY423 GLY424 VAL425 TRP426 ALA427 LEU428 LYS429 TYR430 ALA431 HIS432 GLY433 GLY434 ILE435 LEU436 VAL437 SER438 GLY439 SER440 THR441 ASP442 ARG443 THR444 VAL445 ARG446 VAL447 TRP448 ASP449 ILE450 LYS451 LYS452 GLY453 CYS454 CYS455 THR456 HIS457 VAL458 PHE459 GLU460 GLY461 HIS462 ASN463 SER464 THR465 VAL466 ARG467 CYS468 LEU469 ASP470 ILE471 VAL472 GLU473 TYR474 LYS475 ASN476 ILE477 LYS478 TYR479 ILE480 VAL481 THR482 GLY483 SER484 ARG485 ASP486 ASN487 THR488 LEU489 HIS490 VAL491 TRP492 LYS493 LEU494 PRO495 LYS496 ASP508 TYR509 PRO510 LEU511 VAL512 PHE513 HIS514 THR515 PRO516 GLU517 GLU518 ASN519 PRO520 TYR521 PHE522 VAL523 GLY524 VAL525 LEU526 ARG527 GLY528 HIS529 MSE530 ALA531 SER532 VAL533 ARG534 THR535 VAL536 SER537 GLY538 HIS539 GLY540 ASN541 ILE542 VAL543 VAL544 SER545 GLY546 SER547 TYR548 ASP549 ASN550 THR551 LEU552 ILE553 VAL554 TRP555 ASP556 VAL557 ALA558 GLN559 MSE560 LYS561 CYS562 LEU563 TYR564 ILE565 LEU566 SER567 GLY568 HIS569 THR570 ASP571 ARG572 ILE573 TYR574 SER575 THR576 ILE577 TYR578 ASP579 HIS580 GLU581 ARG582 LYS583 ARG584 CYS585 ILE586 SER587 ALA588 SER589 MSE590 ASP591 THR592 THR593 ILE594 ARG595 ILE596 TRP597 ASP598 LEU599 GLU600 ASN605 GLY606 GLU607 LEU608 MSE625 TYR626 THR627 LEU628 GLN629 GLY630 HIS631 THR632 ALA633 LEU634 VAL635 GLY636 LEU637 LEU638 ARG639 LEU640 SER641 ASP642 LYS643 PHE644 LEU645 VAL646 SER647 ALA648 ALA649 ALA650 ASP651 GLY652 SER653 ILE654 ARG655 GLY656 TRP657 ASP658 ALA659 ASN660 ASP661 TYR662 SER663 ARG664 LYS665 PHE666 SER667 TYR668 HIS669 HIS670 THR671 ASN672 LEU673 SER674 ALA675 ILE676 THR677 THR678 PHE679 TYR680 VAL681 SER682 ASP683 ASN684 ILE685 LEU686 VAL687 SER688 GLY689 SER690 GLU691 ASN692 GLN693 PHE694 ASN695 ILE696 TYR697 ASN698 LEU699 ARG700 SER701 GLY702 LYS703 LEU704 VAL705 HIS706 ALA707 ASN708 ILE709 LEU710 LYS711 ASP712 ALA713 ASP714 GLN715 ILE716 TRP717 SER718 VAL719 ASN720 PHE721 LYS722 GLY723 LYS724 THR725 LEU726 VAL727 ALA728 ALA729 VAL730 GLU731 LYS732 ASP733 GLY734 GLN735 SER736 PHE737 LEU738 GLU739 ILE740 LEU741 ASP742 PHE743 SER744
Unit 3 SER4 ASN5 VAL6 VAL7 LEU8 VAL9 SER10 GLY11 GLU12 GLY13 GLU14 ARG15 PHE16 THR17 VAL18 ASP19 LYS20 LYS21 ILE22 ALA23 GLU24 ARG25 SER26 LEU27 LEU28 LEU29 LYS30 ASN31 TYR32 LEU33 ILE75 VAL76 MSE77 PRO78 VAL79 PRO80 ASN81 VAL82 ARG83 SER84 SER85 VAL86 LEU87 GLN88 LYS89 VAL90 ILE91 GLU92 TRP93 ALA94 GLU95 HIS96 HIS97 ARG98 ASP99 SER100 ASN101 PHE102 PRO103 VAL116 ASP117 SER118 TRP119 ASP120 ARG121 GLU122 PHE123 LEU124 LYS125 VAL126 ASP127 GLN128 GLU129 MSE130 LEU131 TYR132 GLU133 ILE134 ILE135 LEU136 ALA137 ALA138 ASN139 TYR140 LEU141 ASN142 ILE143 LYS144 PRO145 LEU146 LEU147 ASP148 ALA149 GLY150 CYS151 LYS152 VAL153 VAL154 ALA155 GLU156 MSE157 ILE158 ARG159 GLY160 ARG161 SER162 PRO163 GLU164 GLU165 ILE166 ARG167 ARG168 THR169 PHE170 ASN171 ILE172 VAL173 ASN174 ASP175 PHE176 THR177 PRO178 GLU179 GLU180 GLU181 ALA182 ALA183 ILE184 ARG185 ARG186
Unit 4 LEU270 LYS271 ARG272 ASP273 LEU274 ILE275 THR276 SER277 LEU278 PRO279 PHE280 GLU281 ILE282 SER283 LEU284 LYS285 ILE286 PHE287 ASN288 TYR289 LEU290 GLN291 PHE292 GLU293 ASP294 ILE295 ILE296 ASN297 SER298 LEU299 GLY300 VAL301 SER302 GLN303 ASN304 TRP305 ASN306 LYS307 ILE308 ILE309 ARG310 LYS311 SER312 THR313 SER314 LEU315 TRP316 LYS317 LYS318 LEU319 LEU320 ILE321 SER322 GLU323 ASN324 PHE325 VAL326 SER327 PRO328 LYS329 GLY330 PHE331 ASN332 SER333 LEU334 ASN335 LEU336 LYS337 LEU338 SER339 GLN340 LYS341 TYR342 PRO343 LYS344 LEU345 SER346 GLN347 GLN348 ASP349 ARG350 LEU351 ARG352 LEU353 SER354 PHE355 LEU356 GLU357 ASN358 ILE359 PHE360 ILE361 LEU362 LYS363 ASN364 TRP365 TYR366 ASN367 PRO368 LYS369 PHE370 VAL371 PRO372 GLN373 ARG374 THR375 THR376 LEU377 ARG378 GLY379 HIS380 MSE381 THR382 SER383 VAL384 ILE385 THR386 CYS387 LEU388 GLN389 PHE390 GLU391 ASP392 ASN393 TYR394 VAL395 ILE396 THR397 GLY398 ALA399 ASP400 ASP401 LYS402 MSE403 ILE404 ARG405 VAL406 TYR407 ASP408 SER409 ILE410 ASN411 LYS412 LYS413 PHE414 LEU415 LEU416 GLN417 LEU418 SER419 GLY420 HIS421 ASP422 GLY423 GLY424 VAL425 TRP426 ALA427 LEU428 LYS429 TYR430 ALA431 HIS432 GLY433 GLY434 ILE435 LEU436 VAL437 SER438 GLY439 SER440 THR441 ASP442 ARG443 THR444 VAL445 ARG446 VAL447 TRP448 ASP449 ILE450 LYS451 LYS452 GLY453 CYS454 CYS455 THR456 HIS457 VAL458 PHE459 GLU460 GLY461 HIS462 ASN463 SER464 THR465 VAL466 ARG467 CYS468 LEU469 ASP470 ILE471 VAL472 GLU473 TYR474 LYS475 ASN476 ILE477 LYS478 TYR479 ILE480 VAL481 THR482 GLY483 SER484 ARG485 ASP486 ASN487 THR488 LEU489 HIS490 VAL491 TRP492 LYS493 LEU494 PRO495 LYS496 ASP508 TYR509 PRO510 LEU511 VAL512 PHE513 HIS514 THR515 PRO516 GLU517 GLU518 ASN519 PRO520 TYR521 PHE522 VAL523 GLY524 VAL525 LEU526 ARG527 GLY528 HIS529 MSE530 ALA531 SER532 VAL533 ARG534 THR535 VAL536 SER537 GLY538 HIS539 GLY540 ASN541 ILE542 VAL543 VAL544 SER545 GLY546 SER547 TYR548 ASP549 ASN550 THR551 LEU552 ILE553 VAL554 TRP555 ASP556 VAL557 ALA558 GLN559 MSE560 LYS561 CYS562 LEU563 TYR564 ILE565 LEU566 SER567 GLY568 HIS569 THR570 ASP571 ARG572 ILE573 TYR574 SER575 THR576 ILE577 TYR578 ASP579 HIS580 GLU581 ARG582 LYS583 ARG584 CYS585 ILE586 SER587 ALA588 SER589 MSE590 ASP591 THR592 THR593 ILE594 ARG595 ILE596 TRP597 ASP598 LEU599 GLU600 ASN605 GLY606 GLU607 LEU608 MSE625 TYR626 THR627 LEU628 GLN629 GLY630 HIS631 THR632 ALA633 LEU634 VAL635 GLY636 LEU637 LEU638 ARG639 LEU640 SER641 ASP642 LYS643 PHE644 LEU645 VAL646 SER647 ALA648 ALA649 ALA650 ASP651 GLY652 SER653 ILE654 ARG655 GLY656 TRP657 ASP658 ALA659 ASN660 ASP661 TYR662 SER663 ARG664 LYS665 PHE666 SER667 TYR668 HIS669 HIS670 THR671 ASN672 LEU673 SER674 ALA675 ILE676 THR677 THR678 PHE679 TYR680 VAL681 SER682 ASP683 ASN684 ILE685 LEU686 VAL687 SER688 GLY689 SER690 GLU691 ASN692 GLN693 PHE694 ASN695 ILE696 TYR697 ASN698 LEU699 ARG700 SER701 GLY702 LYS703 LEU704 VAL705 HIS706 ALA707 ASN708 ILE709 LEU710 LYS711 ASP712 ALA713 ASP714 GLN715 ILE716 TRP717 SER718 VAL719 ASN720 PHE721 LYS722 GLY723 LYS724 THR725 LEU726 VAL727 ALA728 ALA729 VAL730 GLU731 LYS732 ASP733 GLY734 GLN735 SER736 PHE737 LEU738 GLU739 ILE740 LEU741 ASP742 PHE743 SER744
Unit 5 LEU3 TPO4 PRO5 PRO6
Unit 6 LEU2 LEU3 TPO4 PRO5 PRO6 GLN7 SER8 GLY9
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany