1NDD - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF NEDD8
• Keywords: NEDD8, NEDD-8, UBIQUITIN-LIKE, PROTEOLYSIS, SIGNALING PROTEI
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1NDD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8)	A	74	591	0
2	Protein	PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8)	B	76	600	0
3	Protein	PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8)	C	73	580	0
4	Protein	PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8)	D	73	578	0
5	Ligand	PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8)	A	1	0	1
6	Ligand	PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8)	B	1	0	1
7	Ligand	PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8)	C	3	0	15
8	Ligand	PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8)	D	1	0	5
9	Water			193	0	193
total				495	2349	215

Proteins

Unit 1	MET 1 LEU 2 ILE 3 LYS 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 GLU 12 ILE 13 GLU 14 ILE 15 ASP 16 ILE 17 GLU 18 PRO 19 THR 20 ASP 21 LYS 22 VAL 23 GLU 24 ARG 25 ILE 26 LYS 27 GLU 28 ARG 29 VAL 30 GLU 31 GLU 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 GLN 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 TYR 45 SER 46 GLY 47 LYS 48 GLN 49 MET 50 ASN 51 ASP 52 GLU 53 LYS 54 THR 55 ALA 56 ALA 57 ASP 58 TYR 59 LYS 60 ILE 61 LEU 62 GLY 63 GLY 64 SER 65 VAL 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ALA 72 LEU 73 ARG 74
Unit 2	MET 101 LEU 102 ILE 103 LYS 104 VAL 105 LYS 106 THR 107 LEU 108 THR 109 GLY 110 LYS 111 GLU 112 ILE 113 GLU 114 ILE 115 ASP 116 ILE 117 GLU 118 PRO 119 THR 120 ASP 121 LYS 122 VAL 123 GLU 124 ARG 125 ILE 126 LYS 127 GLU 128 ARG 129 VAL 130 GLU 131 GLU 132 LYS 133 GLU 134 GLY 135 ILE 136 PRO 137 PRO 138 GLN 139 GLN 140 GLN 141 ARG 142 LEU 143 ILE 144 TYR 145 SER 146 GLY 147 LYS 148 GLN 149 MET 150 ASN 151 ASP 152 GLU 153 LYS 154 THR 155 ALA 156 ALA 157 ASP 158 TYR 159 LYS 160 ILE 161 LEU 162 GLY 163 GLY 164 SER 165 VAL 166 LEU 167 HIS 168 LEU 169 VAL 170 LEU 171 ALA 172 LEU 173 ARG 174 GLY 175 GLY 176
Unit 3	MET 201 LEU 202 ILE 203 LYS 204 VAL 205 LYS 206 THR 207 LEU 208 THR 209 GLY 210 LYS 211 GLU 212 ILE 213 GLU 214 ILE 215 ASP 216 ILE 217 GLU 218 PRO 219 THR 220 ASP 221 LYS 222 VAL 223 GLU 224 ARG 225 ILE 226 LYS 227 GLU 228 ARG 229 VAL 230 GLU 231 GLU 232 LYS 233 GLU 234 GLY 235 ILE 236 PRO 237 PRO 238 GLN 239 GLN 240 GLN 241 ARG 242 LEU 243 ILE 244 TYR 245 SER 246 GLY 247 LYS 248 GLN 249 MET 250 ASN 251 ASP 252 GLU 253 LYS 254 THR 255 ALA 256 ALA 257 ASP 258 TYR 259 LYS 260 ILE 261 LEU 262 GLY 263 GLY 264 SER 265 VAL 266 LEU 267 HIS 268 LEU 269 VAL 270 LEU 271 ALA 272 LEU 273
Unit 4	MET 301 LEU 302 ILE 303 LYS 304 VAL 305 LYS 306 THR 307 LEU 308 THR 309 GLY 310 LYS 311 GLU 312 ILE 313 GLU 314 ILE 315 ASP 316 ILE 317 GLU 318 PRO 319 THR 320 ASP 321 LYS 322 VAL 323 GLU 324 ARG 325 ILE 326 LYS 327 GLU 328 ARG 329 VAL 330 GLU 331 GLU 332 LYS 333 GLU 334 GLY 335 ILE 336 PRO 337 PRO 338 GLN 339 GLN 340 GLN 341 ARG 342 LEU 343 ILE 344 TYR 345 SER 346 GLY 347 LYS 348 GLN 349 MET 350 ASN 351 ASP 352 GLU 353 LYS 354 THR 355 ALA 356 ALA 357 ASP 358 TYR 359 LYS 360 ILE 361 LEU 362 GLY 363 GLY 364 SER 365 VAL 366 LEU 367 HIS 368 LEU 369 VAL 370 LEU 371 ALA 372 LEU 373

Ligands

Unit 5	CL 2002
Unit 6	CL 2001
Unit 7	SO4 3002 SO4 3003 SO4 3004
Unit 8	SO4 3001