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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF GLYCINE N-METHYLTRANSFERASE COMPLEXED WITH S- ADENOSYLMETHIONINE AND ACETATE, GNMT:SAM:ACE
Keywords METHYLTRANSFERASE, GLYCINE N-METHYLTRANSFERASE, S-ADENOSYLME ENZYME CATALYTIC MECHANISM, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1NBH     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GLYCINE N-METHYLTRANSFERASE  A 292 2285 0
2  Protein   GLYCINE N-METHYLTRANSFERASE  B 292 2285 0
3  Protein   GLYCINE N-METHYLTRANSFERASE  C 292 2285 0
4  Protein   GLYCINE N-METHYLTRANSFERASE  D 292 2285 0
5  Ligand   GLYCINE N-METHYLTRANSFERASE  A 2 0 31
6  Ligand   GLYCINE N-METHYLTRANSFERASE  B 2 0 31
7  Ligand   GLYCINE N-METHYLTRANSFERASE  C 2 0 31
8  Ligand   GLYCINE N-METHYLTRANSFERASE  D 2 0 31
9 Water     289 0 289
total       1465 9140 413
Proteins
Unit 1 VAL1 ASP2 SER3 VAL4 TYR5 ARG6 THR7 ARG8 SER9 LEU10 GLY11 VAL12 ALA13 ALA14 GLU15 GLY16 ILE17 PRO18 ASP19 GLN20 TYR21 ALA22 ASP23 GLY24 GLU25 ALA26 ALA27 ARG28 VAL29 TRP30 GLN31 LEU32 TYR33 ILE34 GLY35 ASP36 THR37 ARG38 SER39 ARG40 THR41 ALA42 GLU43 TYR44 LYS45 ALA46 TRP47 LEU48 LEU49 GLY50 LEU51 LEU52 ARG53 GLN54 HIS55 GLY56 CYS57 HIS58 ARG59 VAL60 LEU61 ASP62 VAL63 ALA64 CYS65 GLY66 THR67 GLY68 VAL69 ASP70 SER71 ILE72 MET73 LEU74 VAL75 GLU76 GLU77 GLY78 PHE79 SER80 VAL81 THR82 SER83 VAL84 ASP85 ALA86 SER87 ASP88 LYS89 MET90 LEU91 LYS92 TYR93 ALA94 LEU95 LYS96 GLU97 ARG98 TRP99 ASN100 ARG101 ARG102 LYS103 GLU104 PRO105 ALA106 PHE107 ASP108 LYS109 TRP110 VAL111 ILE112 GLU113 GLU114 ALA115 ASN116 TRP117 LEU118 THR119 LEU120 ASP121 LYS122 ASP123 VAL124 PRO125 ALA126 GLY127 ASP128 GLY129 PHE130 ASP131 ALA132 VAL133 ILE134 CYS135 LEU136 GLY137 ASN138 SER139 PHE140 ALA141 HIS142 LEU143 PRO144 ASP145 SER146 LYS147 GLY148 ASP149 GLN150 SER151 GLU152 HIS153 ARG154 LEU155 ALA156 LEU157 LYS158 ASN159 ILE160 ALA161 SER162 MET163 VAL164 ARG165 PRO166 GLY167 GLY168 LEU169 LEU170 VAL171 ILE172 ASP173 HIS174 ARG175 ASN176 TYR177 ASP178 TYR179 ILE180 LEU181 SER182 THR183 GLY184 CYS185 ALA186 PRO187 PRO188 GLY189 LYS190 ASN191 ILE192 TYR193 TYR194 LYS195 SER196 ASP197 LEU198 THR199 LYS200 ASP201 ILE202 THR203 THR204 SER205 VAL206 LEU207 THR208 VAL209 ASN210 ASN211 LYS212 ALA213 HIS214 MET215 VAL216 THR217 LEU218 ASP219 TYR220 THR221 VAL222 GLN223 VAL224 PRO225 GLY226 ALA227 GLY228 ARG229 ASP230 GLY231 ALA232 PRO233 GLY234 PHE235 SER236 LYS237 PHE238 ARG239 LEU240 SER241 TYR242 TYR243 PRO244 HIS245 CYS246 LEU247 ALA248 SER249 PHE250 THR251 GLU252 LEU253 VAL254 GLN255 GLU256 ALA257 PHE258 GLY259 GLY260 ARG261 CYS262 GLN263 HIS264 SER265 VAL266 LEU267 GLY268 ASP269 PHE270 LYS271 PRO272 TYR273 ARG274 PRO275 GLY276 GLN277 ALA278 TYR279 VAL280 PRO281 CYS282 TYR283 PHE284 ILE285 HIS286 VAL287 LEU288 LYS289 LYS290 THR291 GLY292
Unit 2 VAL1 ASP2 SER3 VAL4 TYR5 ARG6 THR7 ARG8 SER9 LEU10 GLY11 VAL12 ALA13 ALA14 GLU15 GLY16 ILE17 PRO18 ASP19 GLN20 TYR21 ALA22 ASP23 GLY24 GLU25 ALA26 ALA27 ARG28 VAL29 TRP30 GLN31 LEU32 TYR33 ILE34 GLY35 ASP36 THR37 ARG38 SER39 ARG40 THR41 ALA42 GLU43 TYR44 LYS45 ALA46 TRP47 LEU48 LEU49 GLY50 LEU51 LEU52 ARG53 GLN54 HIS55 GLY56 CYS57 HIS58 ARG59 VAL60 LEU61 ASP62 VAL63 ALA64 CYS65 GLY66 THR67 GLY68 VAL69 ASP70 SER71 ILE72 MET73 LEU74 VAL75 GLU76 GLU77 GLY78 PHE79 SER80 VAL81 THR82 SER83 VAL84 ASP85 ALA86 SER87 ASP88 LYS89 MET90 LEU91 LYS92 TYR93 ALA94 LEU95 LYS96 GLU97 ARG98 TRP99 ASN100 ARG101 ARG102 LYS103 GLU104 PRO105 ALA106 PHE107 ASP108 LYS109 TRP110 VAL111 ILE112 GLU113 GLU114 ALA115 ASN116 TRP117 LEU118 THR119 LEU120 ASP121 LYS122 ASP123 VAL124 PRO125 ALA126 GLY127 ASP128 GLY129 PHE130 ASP131 ALA132 VAL133 ILE134 CYS135 LEU136 GLY137 ASN138 SER139 PHE140 ALA141 HIS142 LEU143 PRO144 ASP145 SER146 LYS147 GLY148 ASP149 GLN150 SER151 GLU152 HIS153 ARG154 LEU155 ALA156 LEU157 LYS158 ASN159 ILE160 ALA161 SER162 MET163 VAL164 ARG165 PRO166 GLY167 GLY168 LEU169 LEU170 VAL171 ILE172 ASP173 HIS174 ARG175 ASN176 TYR177 ASP178 TYR179 ILE180 LEU181 SER182 THR183 GLY184 CYS185 ALA186 PRO187 PRO188 GLY189 LYS190 ASN191 ILE192 TYR193 TYR194 LYS195 SER196 ASP197 LEU198 THR199 LYS200 ASP201 ILE202 THR203 THR204 SER205 VAL206 LEU207 THR208 VAL209 ASN210 ASN211 LYS212 ALA213 HIS214 MET215 VAL216 THR217 LEU218 ASP219 TYR220 THR221 VAL222 GLN223 VAL224 PRO225 GLY226 ALA227 GLY228 ARG229 ASP230 GLY231 ALA232 PRO233 GLY234 PHE235 SER236 LYS237 PHE238 ARG239 LEU240 SER241 TYR242 TYR243 PRO244 HIS245 CYS246 LEU247 ALA248 SER249 PHE250 THR251 GLU252 LEU253 VAL254 GLN255 GLU256 ALA257 PHE258 GLY259 GLY260 ARG261 CYS262 GLN263 HIS264 SER265 VAL266 LEU267 GLY268 ASP269 PHE270 LYS271 PRO272 TYR273 ARG274 PRO275 GLY276 GLN277 ALA278 TYR279 VAL280 PRO281 CYS282 TYR283 PHE284 ILE285 HIS286 VAL287 LEU288 LYS289 LYS290 THR291 GLY292
Unit 3 VAL1 ASP2 SER3 VAL4 TYR5 ARG6 THR7 ARG8 SER9 LEU10 GLY11 VAL12 ALA13 ALA14 GLU15 GLY16 ILE17 PRO18 ASP19 GLN20 TYR21 ALA22 ASP23 GLY24 GLU25 ALA26 ALA27 ARG28 VAL29 TRP30 GLN31 LEU32 TYR33 ILE34 GLY35 ASP36 THR37 ARG38 SER39 ARG40 THR41 ALA42 GLU43 TYR44 LYS45 ALA46 TRP47 LEU48 LEU49 GLY50 LEU51 LEU52 ARG53 GLN54 HIS55 GLY56 CYS57 HIS58 ARG59 VAL60 LEU61 ASP62 VAL63 ALA64 CYS65 GLY66 THR67 GLY68 VAL69 ASP70 SER71 ILE72 MET73 LEU74 VAL75 GLU76 GLU77 GLY78 PHE79 SER80 VAL81 THR82 SER83 VAL84 ASP85 ALA86 SER87 ASP88 LYS89 MET90 LEU91 LYS92 TYR93 ALA94 LEU95 LYS96 GLU97 ARG98 TRP99 ASN100 ARG101 ARG102 LYS103 GLU104 PRO105 ALA106 PHE107 ASP108 LYS109 TRP110 VAL111 ILE112 GLU113 GLU114 ALA115 ASN116 TRP117 LEU118 THR119 LEU120 ASP121 LYS122 ASP123 VAL124 PRO125 ALA126 GLY127 ASP128 GLY129 PHE130 ASP131 ALA132 VAL133 ILE134 CYS135 LEU136 GLY137 ASN138 SER139 PHE140 ALA141 HIS142 LEU143 PRO144 ASP145 SER146 LYS147 GLY148 ASP149 GLN150 SER151 GLU152 HIS153 ARG154 LEU155 ALA156 LEU157 LYS158 ASN159 ILE160 ALA161 SER162 MET163 VAL164 ARG165 PRO166 GLY167 GLY168 LEU169 LEU170 VAL171 ILE172 ASP173 HIS174 ARG175 ASN176 TYR177 ASP178 TYR179 ILE180 LEU181 SER182 THR183 GLY184 CYS185 ALA186 PRO187 PRO188 GLY189 LYS190 ASN191 ILE192 TYR193 TYR194 LYS195 SER196 ASP197 LEU198 THR199 LYS200 ASP201 ILE202 THR203 THR204 SER205 VAL206 LEU207 THR208 VAL209 ASN210 ASN211 LYS212 ALA213 HIS214 MET215 VAL216 THR217 LEU218 ASP219 TYR220 THR221 VAL222 GLN223 VAL224 PRO225 GLY226 ALA227 GLY228 ARG229 ASP230 GLY231 ALA232 PRO233 GLY234 PHE235 SER236 LYS237 PHE238 ARG239 LEU240 SER241 TYR242 TYR243 PRO244 HIS245 CYS246 LEU247 ALA248 SER249 PHE250 THR251 GLU252 LEU253 VAL254 GLN255 GLU256 ALA257 PHE258 GLY259 GLY260 ARG261 CYS262 GLN263 HIS264 SER265 VAL266 LEU267 GLY268 ASP269 PHE270 LYS271 PRO272 TYR273 ARG274 PRO275 GLY276 GLN277 ALA278 TYR279 VAL280 PRO281 CYS282 TYR283 PHE284 ILE285 HIS286 VAL287 LEU288 LYS289 LYS290 THR291 GLY292
Unit 4 VAL1 ASP2 SER3 VAL4 TYR5 ARG6 THR7 ARG8 SER9 LEU10 GLY11 VAL12 ALA13 ALA14 GLU15 GLY16 ILE17 PRO18 ASP19 GLN20 TYR21 ALA22 ASP23 GLY24 GLU25 ALA26 ALA27 ARG28 VAL29 TRP30 GLN31 LEU32 TYR33 ILE34 GLY35 ASP36 THR37 ARG38 SER39 ARG40 THR41 ALA42 GLU43 TYR44 LYS45 ALA46 TRP47 LEU48 LEU49 GLY50 LEU51 LEU52 ARG53 GLN54 HIS55 GLY56 CYS57 HIS58 ARG59 VAL60 LEU61 ASP62 VAL63 ALA64 CYS65 GLY66 THR67 GLY68 VAL69 ASP70 SER71 ILE72 MET73 LEU74 VAL75 GLU76 GLU77 GLY78 PHE79 SER80 VAL81 THR82 SER83 VAL84 ASP85 ALA86 SER87 ASP88 LYS89 MET90 LEU91 LYS92 TYR93 ALA94 LEU95 LYS96 GLU97 ARG98 TRP99 ASN100 ARG101 ARG102 LYS103 GLU104 PRO105 ALA106 PHE107 ASP108 LYS109 TRP110 VAL111 ILE112 GLU113 GLU114 ALA115 ASN116 TRP117 LEU118 THR119 LEU120 ASP121 LYS122 ASP123 VAL124 PRO125 ALA126 GLY127 ASP128 GLY129 PHE130 ASP131 ALA132 VAL133 ILE134 CYS135 LEU136 GLY137 ASN138 SER139 PHE140 ALA141 HIS142 LEU143 PRO144 ASP145 SER146 LYS147 GLY148 ASP149 GLN150 SER151 GLU152 HIS153 ARG154 LEU155 ALA156 LEU157 LYS158 ASN159 ILE160 ALA161 SER162 MET163 VAL164 ARG165 PRO166 GLY167 GLY168 LEU169 LEU170 VAL171 ILE172 ASP173 HIS174 ARG175 ASN176 TYR177 ASP178 TYR179 ILE180 LEU181 SER182 THR183 GLY184 CYS185 ALA186 PRO187 PRO188 GLY189 LYS190 ASN191 ILE192 TYR193 TYR194 LYS195 SER196 ASP197 LEU198 THR199 LYS200 ASP201 ILE202 THR203 THR204 SER205 VAL206 LEU207 THR208 VAL209 ASN210 ASN211 LYS212 ALA213 HIS214 MET215 VAL216 THR217 LEU218 ASP219 TYR220 THR221 VAL222 GLN223 VAL224 PRO225 GLY226 ALA227 GLY228 ARG229 ASP230 GLY231 ALA232 PRO233 GLY234 PHE235 SER236 LYS237 PHE238 ARG239 LEU240 SER241 TYR242 TYR243 PRO244 HIS245 CYS246 LEU247 ALA248 SER249 PHE250 THR251 GLU252 LEU253 VAL254 GLN255 GLU256 ALA257 PHE258 GLY259 GLY260 ARG261 CYS262 GLN263 HIS264 SER265 VAL266 LEU267 GLY268 ASP269 PHE270 LYS271 PRO272 TYR273 ARG274 PRO275 GLY276 GLN277 ALA278 TYR279 VAL280 PRO281 CYS282 TYR283 PHE284 ILE285 HIS286 VAL287 LEU288 LYS289 LYS290 THR291 GLY292
Ligands
Unit 5 SAM293 ACT294
Unit 6 SAM1293 ACT1294
Unit 7 SAM2293 ACT2294
Unit 8 SAM3293 ACT3294
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany