Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF STEFIN A IN COMPLEX WITH CATHEPSIN H: N RESIDUES OF INHIBITORS CAN ADAPT TO THE ACTIVE SITES OF END EXOPEPTIDASES
Keywords CYSTEINE PROTEINASE, AMINOPEPTIDASE, CYSTATIN, ENZYME-INHIBI COMPLEX, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1NB3     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CATHEPSIN H  A 220 1706 0
2  Protein   CATHEPSIN H MINI CHAIN  P 8 58 0
3  Protein   STEFIN A  I 98 775 0
4  Protein   CATHEPSIN H  B 220 1706 0
5  Protein   CATHEPSIN H MINI CHAIN  R 8 58 0
6  Protein   STEFIN A  J 98 775 0
7  Protein   CATHEPSIN H  C 220 1706 0
8  Protein   CATHEPSIN H MINI CHAIN  S 8 58 0
9  Protein   STEFIN A  K 98 775 0
10  Protein   CATHEPSIN H  D 220 1706 0
11  Protein   CATHEPSIN H MINI CHAIN  T 8 58 0
12  Protein   STEFIN A  L 98 775 0
13  Ligand    E 3 0 39
14  Ligand    F 3 0 39
15  Ligand    G 3 0 39
16  Ligand    H 3 0 39
17 Water     543 0 543
total       1859 10156 699
Proteins
Unit 1 TYR1 PRO2 PRO3 SER4 MET5 ASP6 TRP7 ARG8 LYS9 LYS10 GLY10A ASN11 PHE12 VAL13 SER14 PRO15 VAL16 LYS17 ASN18 GLN19 GLY20 SER21 CYS22 GLY23 SER24 CYS25 TRP26 THR27 PHE28 SER29 THR30 THR31 GLY32 ALA33 LEU34 GLU35 SER36 ALA37 VAL38 ALA39 ILE40 ALA41 THR42 GLY43 LYS44 MET45 LEU46 SER47 LEU48 ALA49 GLU50 GLN51 GLN52 LEU53 VAL54 ASP55 CYS56 ALA57 GLN58 ASN58A PHE58B ASN59 ASN60 HIS61 GLY62 CYS63 GLN64 GLY65 GLY66 LEU67 PRO68 SER69 GLN70 ALA71 PHE72 GLU73 TYR74 ILE75 ARG76 TYR77 ASN78 LYS78A GLY79 ILE80 MET81 GLY82 GLU83 ASP84 THR85 TYR86 PRO87 TYR88 LYS89 GLY90 GLN91 ASP92 ASP93 HIS94 CYS95 LYS96 PHE97 GLN98 PRO99 ASP102 LYS102A ALA103 ILE104 ALA105 PHE106 VAL107 LYS108 ASP109 VAL110 ALA111 ASN112 ILE113 THR114 MET115 ASN116 ASP117 GLU118 GLU119 ALA120 MET121 VAL122 GLU123 ALA124 VAL125 ALA126 LEU126A TYR127 ASN128 PRO129 VAL130 SER131 PHE132 ALA133 PHE134 GLU135 VAL136 THR138 ASN139 ASP140 PHE141 LEU142 MET143 TYR144 ARG145 LYS146 GLY147 ILE148 TYR149 SER150 SER151 THR152 SER153 CYS154 HIS155 LYS155A THR155B PRO155C ASP155D LYS156 VAL157 ASN158 HIS159 ALA160 VAL161 LEU162 ALA163 VAL164 GLY165 TYR166 GLY167 GLU168 GLU168A ASN168B GLY168C ILE168D PRO169 TYR170 TRP171 ILE172 VAL173 LYS174 ASN175 SER176 TRP177 GLY178 PRO179 GLN180 TRP181 GLY182 MET183 ASN184 GLY185 TYR186 PHE187 LEU188 ILE189 GLU190 ARG191 GLY192 LYS195 ASN198 MET199 CYS200 GLY201 LEU202 ALA203 ALA204 CYS205 ALA206 SER207 TYR208 PRO209 ILE210 PRO211 LEU212 VAL212A
Unit 2 GLU76 PRO77 GLN78 ASN79 CYS80 SER81 ALA82 THR83
Unit 3 MET6 ILE7 PRO8 GLY9 GLY10 LEU11 SER12 GLU13 ALA14 LYS15 PRO16 ALA17 THR18 PRO19 GLU20 ILE21 GLN22 GLU23 ILE24 VAL25 ASP26 LYS27 VAL28 LYS29 PRO30 GLN31 LEU32 GLU33 GLU34 LYS35 THR36 ASN37 GLU38 THR39 TYR40 GLY43 LYS44 LEU45 GLU46 ALA47 VAL48 GLN49 TYR50 LYS51 THR52 GLN53 VAL54 VAL55 ALA56 GLY57 THR58 ASN59 TYR60 TYR61 ILE62 LYS63 VAL64 ARG65 ALA66 GLY67 ASP68 ASN92 LYS93 TYR94 MET95 HIS96 LEU97 LYS98 VAL99 PHE100 LYS101 SER102 LEU102A PRO103 GLY104 GLN105 ASN105A GLU106 ASP107 LEU108 VAL109 LEU110 THR111 GLY112 TYR113 GLN114 VAL115 ASP115A LYS116 ASN117 LYS118 ASP119 ASP120 GLU121 LEU122 THR123 GLY124 PHE125
Unit 4 TYR1 PRO2 PRO3 SER4 MET5 ASP6 TRP7 ARG8 LYS9 LYS10 GLY10A ASN11 PHE12 VAL13 SER14 PRO15 VAL16 LYS17 ASN18 GLN19 GLY20 SER21 CYS22 GLY23 SER24 CYS25 TRP26 THR27 PHE28 SER29 THR30 THR31 GLY32 ALA33 LEU34 GLU35 SER36 ALA37 VAL38 ALA39 ILE40 ALA41 THR42 GLY43 LYS44 MET45 LEU46 SER47 LEU48 ALA49 GLU50 GLN51 GLN52 LEU53 VAL54 ASP55 CYS56 ALA57 GLN58 ASN58A PHE58B ASN59 ASN60 HIS61 GLY62 CYS63 GLN64 GLY65 GLY66 LEU67 PRO68 SER69 GLN70 ALA71 PHE72 GLU73 TYR74 ILE75 ARG76 TYR77 ASN78 LYS78A GLY79 ILE80 MET81 GLY82 GLU83 ASP84 THR85 TYR86 PRO87 TYR88 LYS89 GLY90 GLN91 ASP92 ASP93 HIS94 CYS95 LYS96 PHE97 GLN98 PRO99 ASP102 LYS102A ALA103 ILE104 ALA105 PHE106 VAL107 LYS108 ASP109 VAL110 ALA111 ASN112 ILE113 THR114 MET115 ASN116 ASP117 GLU118 GLU119 ALA120 MET121 VAL122 GLU123 ALA124 VAL125 ALA126 LEU126A TYR127 ASN128 PRO129 VAL130 SER131 PHE132 ALA133 PHE134 GLU135 VAL136 THR138 ASN139 ASP140 PHE141 LEU142 MET143 TYR144 ARG145 LYS146 GLY147 ILE148 TYR149 SER150 SER151 THR152 SER153 CYS154 HIS155 LYS155A THR155B PRO155C ASP155D LYS156 VAL157 ASN158 HIS159 ALA160 VAL161 LEU162 ALA163 VAL164 GLY165 TYR166 GLY167 GLU168 GLU168A ASN168B GLY168C ILE168D PRO169 TYR170 TRP171 ILE172 VAL173 LYS174 ASN175 SER176 TRP177 GLY178 PRO179 GLN180 TRP181 GLY182 MET183 ASN184 GLY185 TYR186 PHE187 LEU188 ILE189 GLU190 ARG191 GLY192 LYS195 ASN198 MET199 CYS200 GLY201 LEU202 ALA203 ALA204 CYS205 ALA206 SER207 TYR208 PRO209 ILE210 PRO211 LEU212 VAL212A
Unit 5 GLU76 PRO77 GLN78 ASN79 CYS80 SER81 ALA82 THR83
Unit 6 MET6 ILE7 PRO8 GLY9 GLY10 LEU11 SER12 GLU13 ALA14 LYS15 PRO16 ALA17 THR18 PRO19 GLU20 ILE21 GLN22 GLU23 ILE24 VAL25 ASP26 LYS27 VAL28 LYS29 PRO30 GLN31 LEU32 GLU33 GLU34 LYS35 THR36 ASN37 GLU38 THR39 TYR40 GLY43 LYS44 LEU45 GLU46 ALA47 VAL48 GLN49 TYR50 LYS51 THR52 GLN53 VAL54 VAL55 ALA56 GLY57 THR58 ASN59 TYR60 TYR61 ILE62 LYS63 VAL64 ARG65 ALA66 GLY67 ASP68 ASN92 LYS93 TYR94 MET95 HIS96 LEU97 LYS98 VAL99 PHE100 LYS101 SER102 LEU102A PRO103 GLY104 GLN105 ASN105A GLU106 ASP107 LEU108 VAL109 LEU110 THR111 GLY112 TYR113 GLN114 VAL115 ASP115A LYS116 ASN117 LYS118 ASP119 ASP120 GLU121 LEU122 THR123 GLY124 PHE125
Unit 7 TYR1 PRO2 PRO3 SER4 MET5 ASP6 TRP7 ARG8 LYS9 LYS10 GLY10A ASN11 PHE12 VAL13 SER14 PRO15 VAL16 LYS17 ASN18 GLN19 GLY20 SER21 CYS22 GLY23 SER24 CYS25 TRP26 THR27 PHE28 SER29 THR30 THR31 GLY32 ALA33 LEU34 GLU35 SER36 ALA37 VAL38 ALA39 ILE40 ALA41 THR42 GLY43 LYS44 MET45 LEU46 SER47 LEU48 ALA49 GLU50 GLN51 GLN52 LEU53 VAL54 ASP55 CYS56 ALA57 GLN58 ASN58A PHE58B ASN59 ASN60 HIS61 GLY62 CYS63 GLN64 GLY65 GLY66 LEU67 PRO68 SER69 GLN70 ALA71 PHE72 GLU73 TYR74 ILE75 ARG76 TYR77 ASN78 LYS78A GLY79 ILE80 MET81 GLY82 GLU83 ASP84 THR85 TYR86 PRO87 TYR88 LYS89 GLY90 GLN91 ASP92 ASP93 HIS94 CYS95 LYS96 PHE97 GLN98 PRO99 ASP102 LYS102A ALA103 ILE104 ALA105 PHE106 VAL107 LYS108 ASP109 VAL110 ALA111 ASN112 ILE113 THR114 MET115 ASN116 ASP117 GLU118 GLU119 ALA120 MET121 VAL122 GLU123 ALA124 VAL125 ALA126 LEU126A TYR127 ASN128 PRO129 VAL130 SER131 PHE132 ALA133 PHE134 GLU135 VAL136 THR138 ASN139 ASP140 PHE141 LEU142 MET143 TYR144 ARG145 LYS146 GLY147 ILE148 TYR149 SER150 SER151 THR152 SER153 CYS154 HIS155 LYS155A THR155B PRO155C ASP155D LYS156 VAL157 ASN158 HIS159 ALA160 VAL161 LEU162 ALA163 VAL164 GLY165 TYR166 GLY167 GLU168 GLU168A ASN168B GLY168C ILE168D PRO169 TYR170 TRP171 ILE172 VAL173 LYS174 ASN175 SER176 TRP177 GLY178 PRO179 GLN180 TRP181 GLY182 MET183 ASN184 GLY185 TYR186 PHE187 LEU188 ILE189 GLU190 ARG191 GLY192 LYS195 ASN198 MET199 CYS200 GLY201 LEU202 ALA203 ALA204 CYS205 ALA206 SER207 TYR208 PRO209 ILE210 PRO211 LEU212 VAL212A
Unit 8 GLU76 PRO77 GLN78 ASN79 CYS80 SER81 ALA82 THR83
Unit 9 MET6 ILE7 PRO8 GLY9 GLY10 LEU11 SER12 GLU13 ALA14 LYS15 PRO16 ALA17 THR18 PRO19 GLU20 ILE21 GLN22 GLU23 ILE24 VAL25 ASP26 LYS27 VAL28 LYS29 PRO30 GLN31 LEU32 GLU33 GLU34 LYS35 THR36 ASN37 GLU38 THR39 TYR40 GLY43 LYS44 LEU45 GLU46 ALA47 VAL48 GLN49 TYR50 LYS51 THR52 GLN53 VAL54 VAL55 ALA56 GLY57 THR58 ASN59 TYR60 TYR61 ILE62 LYS63 VAL64 ARG65 ALA66 GLY67 ASP68 ASN92 LYS93 TYR94 MET95 HIS96 LEU97 LYS98 VAL99 PHE100 LYS101 SER102 LEU102A PRO103 GLY104 GLN105 ASN105A GLU106 ASP107 LEU108 VAL109 LEU110 THR111 GLY112 TYR113 GLN114 VAL115 ASP115A LYS116 ASN117 LYS118 ASP119 ASP120 GLU121 LEU122 THR123 GLY124 PHE125
Unit 10 TYR1 PRO2 PRO3 SER4 MET5 ASP6 TRP7 ARG8 LYS9 LYS10 GLY10A ASN11 PHE12 VAL13 SER14 PRO15 VAL16 LYS17 ASN18 GLN19 GLY20 SER21 CYS22 GLY23 SER24 CYS25 TRP26 THR27 PHE28 SER29 THR30 THR31 GLY32 ALA33 LEU34 GLU35 SER36 ALA37 VAL38 ALA39 ILE40 ALA41 THR42 GLY43 LYS44 MET45 LEU46 SER47 LEU48 ALA49 GLU50 GLN51 GLN52 LEU53 VAL54 ASP55 CYS56 ALA57 GLN58 ASN58A PHE58B ASN59 ASN60 HIS61 GLY62 CYS63 GLN64 GLY65 GLY66 LEU67 PRO68 SER69 GLN70 ALA71 PHE72 GLU73 TYR74 ILE75 ARG76 TYR77 ASN78 LYS78A GLY79 ILE80 MET81 GLY82 GLU83 ASP84 THR85 TYR86 PRO87 TYR88 LYS89 GLY90 GLN91 ASP92 ASP93 HIS94 CYS95 LYS96 PHE97 GLN98 PRO99 ASP102 LYS102A ALA103 ILE104 ALA105 PHE106 VAL107 LYS108 ASP109 VAL110 ALA111 ASN112 ILE113 THR114 MET115 ASN116 ASP117 GLU118 GLU119 ALA120 MET121 VAL122 GLU123 ALA124 VAL125 ALA126 LEU126A TYR127 ASN128 PRO129 VAL130 SER131 PHE132 ALA133 PHE134 GLU135 VAL136 THR138 ASN139 ASP140 PHE141 LEU142 MET143 TYR144 ARG145 LYS146 GLY147 ILE148 TYR149 SER150 SER151 THR152 SER153 CYS154 HIS155 LYS155A THR155B PRO155C ASP155D LYS156 VAL157 ASN158 HIS159 ALA160 VAL161 LEU162 ALA163 VAL164 GLY165 TYR166 GLY167 GLU168 GLU168A ASN168B GLY168C ILE168D PRO169 TYR170 TRP171 ILE172 VAL173 LYS174 ASN175 SER176 TRP177 GLY178 PRO179 GLN180 TRP181 GLY182 MET183 ASN184 GLY185 TYR186 PHE187 LEU188 ILE189 GLU190 ARG191 GLY192 LYS195 ASN198 MET199 CYS200 GLY201 LEU202 ALA203 ALA204 CYS205 ALA206 SER207 TYR208 PRO209 ILE210 PRO211 LEU212 VAL212A
Unit 11 GLU76 PRO77 GLN78 ASN79 CYS80 SER81 ALA82 THR83
Unit 12 MET6 ILE7 PRO8 GLY9 GLY10 LEU11 SER12 GLU13 ALA14 LYS15 PRO16 ALA17 THR18 PRO19 GLU20 ILE21 GLN22 GLU23 ILE24 VAL25 ASP26 LYS27 VAL28 LYS29 PRO30 GLN31 LEU32 GLU33 GLU34 LYS35 THR36 ASN37 GLU38 THR39 TYR40 GLY43 LYS44 LEU45 GLU46 ALA47 VAL48 GLN49 TYR50 LYS51 THR52 GLN53 VAL54 VAL55 ALA56 GLY57 THR58 ASN59 TYR60 TYR61 ILE62 LYS63 VAL64 ARG65 ALA66 GLY67 ASP68 ASN92 LYS93 TYR94 MET95 HIS96 LEU97 LYS98 VAL99 PHE100 LYS101 SER102 LEU102A PRO103 GLY104 GLN105 ASN105A GLU106 ASP107 LEU108 VAL109 LEU110 THR111 GLY112 TYR113 GLN114 VAL115 ASP115A LYS116 ASN117 LYS118 ASP119 ASP120 GLU121 LEU122 THR123 GLY124 PHE125
Ligands
Unit 13 NAG1 NAG2 BMA3
Unit 14 NAG1 NAG2 BMA3
Unit 15 NAG1 NAG2 BMA3
Unit 16 NAG1 NAG2 BMA3
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany