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Title | TRICLINIC FORM OF TRYPANOSOMA CRUZI TRANS-SIALIDASE, SOAKED ACETYLNEURAMINYL-A-2,3-THIO-GALACTOSIDE (NA-S-GAL) | |
Keywords | SIALIDASE, TRANS-GLYCOSYLATION, PROTEIN-CARBOHYDRATE INTERAC BETA-PROPELLER, HYDROLASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1MS5 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | TRANS-SIALIDASE | A | 623 | 4825 | 0 |
2 | Protein | TRANS-SIALIDASE | B | 621 | 4811 | 0 |
3 | Water | 618 | 0 | 618 | ||
total | 1862 | 9636 | 618 |
Unit 1 | ALA2 PRO3 GLY4 SER5 SER6 ARG7 VAL8 GLU9 LEU10 PHE11 LYS12 ARG13 GLN14 SER15 SER16 LYS17 VAL18 PRO19 PHE20 GLU21 LYS22 ASP23 GLY24 LYS25 VAL26 THR27 GLU28 ARG29 VAL30 VAL31 HIS32 SER33 PHE34 ARG35 LEU36 PRO37 ALA38 LEU39 VAL40 ASN41 VAL42 ASP43 GLY44 VAL45 MET46 VAL47 ALA48 ILE49 ALA50 ASP51 ALA52 ARG53 TYR54 GLU55 THR56 SER57 PHE58 ASP59 ASN60 SER61 LEU62 ILE63 ASP64 THR65 VAL66 ALA67 LYS68 TYR69 SER70 VAL71 ASP72 ASP73 GLY74 GLU75 THR76 TRP77 GLU78 THR79 GLN80 ILE81 ALA82 ILE83 LYS84 ASN85 SER86 ARG87 ALA88 SER89 SER90 VAL91 SER92 ARG93 VAL94 VAL95 ASP96 PRO97 THR98 VAL99 ILE100 VAL101 LYS102 GLY103 ASN104 LYS105 LEU106 TYR107 VAL108 LEU109 VAL110 GLY111 SER112 TYR113 ASN114 SER115 SER116 ARG117 SER118 TYR119 TRP120 THR121 SER122 HIS123 GLY124 ASP125 ALA126 ARG127 ASP128 TRP129 ASP130 ILE131 LEU132 LEU133 ALA134 VAL135 GLY136 GLU137 VAL138 THR139 LYS140 SER141 THR142 ALA143 GLY144 GLY145 LYS146 ILE147 THR148 ALA149 SER150 ILE151 LYS152 TRP153 GLY154 SER155 PRO156 VAL157 SER158 LEU159 LYS160 GLU161 PHE162 PHE163 PRO164 ALA165 GLU166 MET167 GLU168 GLY169 MET170 HIS171 THR172 ASN173 GLN174 PHE175 LEU176 GLY177 GLY178 ALA179 GLY180 VAL181 ALA182 ILE183 VAL184 ALA185 SER186 ASN187 GLY188 ASN189 LEU190 VAL191 TYR192 PRO193 VAL194 GLN195 VAL196 THR197 ASN198 LYS199 LYS200 LYS201 GLN202 VAL203 PHE204 SER205 LYS206 ILE207 PHE208 TYR209 SER210 GLU211 ASP212 GLU213 GLY214 LYS215 THR216 TRP217 LYS218 PHE219 GLY220 LYS221 GLY222 ARG223 SER224 ALA225 PHE226 GLY227 CYS228 SER229 GLU230 PRO231 VAL232 ALA233 LEU234 GLU235 TRP236 GLU237 GLY238 LYS239 LEU240 ILE241 ILE242 ASN243 THR244 ARG245 VAL246 ASP247 TYR248 ARG249 ARG250 ARG251 LEU252 VAL253 TYR254 GLU255 SER256 SER257 ASP258 MET259 GLY260 ASN261 THR262 TRP263 LEU264 GLU265 ALA266 VAL267 GLY268 THR269 LEU270 SER271 ARG272 VAL273 TRP274 GLY275 PRO276 SER277 PRO278 LYS279 SER280 ASN281 GLN282 PRO283 GLY284 SER285 GLN286 SER287 SER288 PHE289 THR290 ALA291 VAL292 THR293 ILE294 GLU295 GLY296 MET297 ARG298 VAL299 MET300 LEU301 PHE302 THR303 HIS304 PRO305 LEU306 ASN307 PHE308 LYS309 GLY310 ARG311 TRP312 LEU313 ARG314 ASP315 ARG316 LEU317 ASN318 LEU319 TRP320 LEU321 THR322 ASP323 ASN324 GLN325 ARG326 ILE327 TYR328 ASN329 VAL330 GLY331 GLN332 VAL333 SER334 ILE335 GLY336 ASP337 GLU338 ASN339 SER340 ALA341 TYR342 SER343 SER344 VAL345 LEU346 TYR347 LYS348 ASP349 ASP350 LYS351 LEU352 TYR353 CYS354 LEU355 HIS356 GLU357 ILE358 ASN359 SER360 ASN361 GLU362 VAL363 TYR364 SER365 LEU366 VAL367 PHE368 ALA369 ARG370 LEU371 VAL372 GLY373 GLU374 LEU375 ARG376 ILE377 ILE378 LYS379 SER380 VAL381 LEU382 GLN383 SER384 TRP385 LYS386 ASN387 TRP388 ASP389 SER390 HIS391 LEU392 SER393 SER394 ILE395 CYS396 THR397 PRO398 ALA399 GLY409 CYS410 GLY411 PRO412 ALA413 VAL414 THR415 THR416 VAL417 GLY418 LEU419 VAL420 GLY421 PHE422 LEU423 SER424 HIS425 SER426 ALA427 THR428 LYS429 THR430 GLU431 TRP432 GLU433 ASP434 ALA435 TYR436 ARG437 CYS438 VAL439 ASN440 ALA441 SER442 THR443 ALA444 ASN445 ALA446 GLU447 ARG448 VAL449 PRO450 ASN451 GLY452 LEU453 LYS454 PHE455 ALA456 GLY457 VAL458 GLY459 GLY460 GLY461 ALA462 LEU463 TRP464 PRO465 VAL466 SER467 GLN468 GLN469 GLY470 GLN471 ASN472 GLN473 ARG474 TYR475 PHE476 PHE477 ALA478 ASN479 HIS480 ALA481 PHE482 THR483 LEU484 VAL485 ALA486 SER487 VAL488 THR489 ILE490 HIS491 GLU492 VAL493 PRO494 LYS495 GLY496 ALA497 SER498 PRO499 LEU500 LEU501 GLY502 ALA503 SER504 LEU505 ASP506 SER507 SER508 GLY509 GLY510 LYS511 LYS512 LEU513 LEU514 GLY515 LEU516 SER517 TYR518 ASP519 LYS520 ARG521 HIS522 GLN523 TRP524 GLN525 PRO526 ILE527 TYR528 GLY529 SER530 THR531 PRO532 VAL533 THR534 PRO535 THR536 GLY537 SER538 TRP539 GLU540 MET541 GLY542 LYS543 ARG544 TYR545 HIS546 VAL547 VAL548 LEU549 THR550 MET551 ALA552 ASN553 LYS554 ILE555 GLY556 SER557 VAL558 TYR559 ILE560 ASP561 GLY562 GLU563 PRO564 LEU565 GLU566 GLY567 SER568 GLY569 GLN570 THR571 VAL572 VAL573 PRO574 ASP575 GLU576 ARG577 THR578 PRO579 ASP580 ILE581 SER582 HIS583 PHE584 TYR585 VAL586 GLY587 GLY588 TYR589 LYS590 ARG591 SER592 GLY593 MET594 PRO595 THR596 ASP597 SER598 ARG599 VAL600 THR601 VAL602 ASN603 ASN604 VAL605 LEU606 LEU607 TYR608 ASN609 ARG610 GLN611 LEU612 ASN613 ALA614 GLU615 GLU616 ILE617 ARG618 THR619 LEU620 PHE621 LEU622 SER623 GLN624 ASP625 LEU626 ILE627 GLY628 THR629 GLU630 ALA631 HIS632 MET633 |
Unit 2 | ALA2 PRO3 GLY4 SER5 SER6 ARG7 VAL8 GLU9 LEU10 PHE11 LYS12 ARG13 GLN14 SER15 SER16 LYS17 VAL18 PRO19 PHE20 GLU21 LYS22 ASP23 GLY24 LYS25 VAL26 THR27 GLU28 ARG29 VAL30 VAL31 HIS32 SER33 PHE34 ARG35 LEU36 PRO37 ALA38 LEU39 VAL40 ASN41 VAL42 ASP43 GLY44 VAL45 MET46 VAL47 ALA48 ILE49 ALA50 ASP51 ALA52 ARG53 TYR54 GLU55 THR56 SER57 PHE58 ASP59 ASN60 SER61 LEU62 ILE63 ASP64 THR65 VAL66 ALA67 LYS68 TYR69 SER70 VAL71 ASP72 ASP73 GLY74 GLU75 THR76 TRP77 GLU78 THR79 GLN80 ILE81 ALA82 ILE83 LYS84 ASN85 SER86 ARG87 ALA88 SER89 SER90 VAL91 SER92 ARG93 VAL94 VAL95 ASP96 PRO97 THR98 VAL99 ILE100 VAL101 LYS102 GLY103 ASN104 LYS105 LEU106 TYR107 VAL108 LEU109 VAL110 GLY111 SER112 TYR113 ASN114 SER115 SER116 ARG117 SER118 TYR119 TRP120 THR121 SER122 HIS123 GLY124 ASP125 ALA126 ARG127 ASP128 TRP129 ASP130 ILE131 LEU132 LEU133 ALA134 VAL135 GLY136 GLU137 VAL138 THR139 LYS140 SER141 THR142 ALA143 GLY144 GLY145 LYS146 ILE147 THR148 ALA149 SER150 ILE151 LYS152 TRP153 GLY154 SER155 PRO156 VAL157 SER158 LEU159 LYS160 GLU161 PHE162 PHE163 PRO164 ALA165 GLU166 MET167 GLU168 GLY169 MET170 HIS171 THR172 ASN173 GLN174 PHE175 LEU176 GLY177 GLY178 ALA179 GLY180 VAL181 ALA182 ILE183 VAL184 ALA185 SER186 ASN187 GLY188 ASN189 LEU190 VAL191 TYR192 PRO193 VAL194 GLN195 VAL196 THR197 ASN198 LYS199 LYS200 LYS201 GLN202 VAL203 PHE204 SER205 LYS206 ILE207 PHE208 TYR209 SER210 GLU211 ASP212 GLU213 GLY214 LYS215 THR216 TRP217 LYS218 PHE219 GLY220 LYS221 GLY222 ARG223 SER224 ALA225 PHE226 GLY227 CYS228 SER229 GLU230 PRO231 VAL232 ALA233 LEU234 GLU235 TRP236 GLU237 GLY238 LYS239 LEU240 ILE241 ILE242 ASN243 THR244 ARG245 VAL246 ASP247 TYR248 ARG249 ARG250 ARG251 LEU252 VAL253 TYR254 GLU255 SER256 SER257 ASP258 MET259 GLY260 ASN261 THR262 TRP263 LEU264 GLU265 ALA266 VAL267 GLY268 THR269 LEU270 SER271 ARG272 VAL273 TRP274 GLY275 PRO276 SER277 PRO278 LYS279 SER280 ASN281 GLN282 PRO283 GLY284 SER285 GLN286 SER287 SER288 PHE289 THR290 ALA291 VAL292 THR293 ILE294 GLU295 GLY296 MET297 ARG298 VAL299 MET300 LEU301 PHE302 THR303 HIS304 PRO305 LEU306 ASN307 PHE308 LYS309 GLY310 ARG311 TRP312 LEU313 ARG314 ASP315 ARG316 LEU317 ASN318 LEU319 TRP320 LEU321 THR322 ASP323 ASN324 GLN325 ARG326 ILE327 TYR328 ASN329 VAL330 GLY331 GLN332 VAL333 SER334 ILE335 GLY336 ASP337 GLU338 ASN339 SER340 ALA341 TYR342 SER343 SER344 VAL345 LEU346 TYR347 LYS348 ASP349 ASP350 LYS351 LEU352 TYR353 CYS354 LEU355 HIS356 GLU357 ILE358 ASN359 SER360 ASN361 GLU362 VAL363 TYR364 SER365 LEU366 VAL367 PHE368 ALA369 ARG370 LEU371 VAL372 GLY373 GLU374 LEU375 ARG376 ILE377 ILE378 LYS379 SER380 VAL381 LEU382 GLN383 SER384 TRP385 LYS386 ASN387 TRP388 ASP389 SER390 HIS391 LEU392 SER393 SER394 ILE395 CYS396 THR397 PRO398 ALA399 GLY409 CYS410 GLY411 PRO412 ALA413 VAL414 THR415 THR416 VAL417 GLY418 LEU419 VAL420 GLY421 PHE422 LEU423 SER424 HIS425 SER426 ALA427 THR428 LYS429 THR430 GLU431 TRP432 GLU433 ASP434 ALA435 TYR436 ARG437 CYS438 VAL439 ASN440 ALA441 SER442 THR443 ALA444 ASN445 ALA446 GLU447 ARG448 VAL449 PRO450 ASN451 GLY452 LEU453 LYS454 PHE455 ALA456 GLY457 VAL458 GLY459 GLY460 GLY461 ALA462 LEU463 TRP464 PRO465 VAL466 SER467 GLN468 GLN469 GLY470 GLN471 ASN472 GLN473 ARG474 TYR475 PHE476 PHE477 ALA478 ASN479 HIS480 ALA481 PHE482 THR483 LEU484 VAL485 ALA486 SER487 VAL488 THR489 ILE490 HIS491 GLU492 VAL493 PRO494 LYS495 GLY496 ALA497 SER498 PRO499 LEU500 LEU501 GLY502 ALA503 SER504 LEU505 ASP506 SER507 SER508 GLY509 GLY510 LYS511 LYS512 LEU513 LEU514 GLY515 LEU516 SER517 TYR518 ASP519 LYS520 ARG521 HIS522 GLN523 TRP524 GLN525 PRO526 ILE527 TYR528 GLY529 SER530 THR531 PRO532 VAL533 THR534 PRO535 THR536 GLY537 SER538 TRP539 GLU540 MET541 GLY542 LYS543 ARG544 TYR545 HIS546 VAL547 VAL548 LEU549 THR550 MET551 ALA552 ASN553 LYS554 ILE555 GLY556 SER557 VAL558 TYR559 ILE560 ASP561 GLY562 GLU563 PRO564 LEU565 GLU566 GLY567 SER568 GLY569 GLN570 THR571 VAL572 VAL573 PRO574 GLU576 ARG577 THR578 PRO579 ASP580 ILE581 SER582 HIS583 PHE584 TYR585 VAL586 GLY587 GLY588 TYR589 LYS590 ARG591 SER592 GLY593 MET594 PRO595 THR596 ASP597 SER598 ARG599 VAL600 THR601 VAL602 ASN603 ASN604 VAL605 LEU606 LEU607 TYR608 ASN609 ARG610 GLN611 LEU612 ASN613 ALA614 GLU615 GLU616 ILE617 ARG618 THR619 LEU620 PHE621 LEU622 SER623 GLN624 ASP625 LEU626 ILE627 GLY628 THR629 GLU630 ALA631 HIS632 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |