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Sequence, Chains, Asymmetric and Biological Units

Title THE STRUCTURE OF THE COMPLEX OF THE FAB FRAGMENT OF THE ESTE ANTIBODY MS6-164 AND A TRANSITION-STATE ANALOG
Keywords CATALYTIC ANTIBODY, ESTER HYDROLYSIS, ESTEROLYTIC, FAB, IMMUNOGLOBULIN, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1MH5     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   IMMUNOGLOBULIN MS6-164  A 197 1528 0
2  Protein   IMMUNOGLOBULIN MS6-164  B 172 1339 0
3  Protein   IMMUNOGLOBULIN MS6-164  L 212 1644 0
4  Protein   IMMUNOGLOBULIN MS6-164  H 190 1455 0
5  Ligand   IMMUNOGLOBULIN MS6-164  B 2 0 38
6  Ligand   IMMUNOGLOBULIN MS6-164  H 2 0 38
7 Water     517 0 517
total       1292 5966 593

Proteins
Unit 1 ASP1 ILE2 VAL3 MET4 THR5 GLN6 ALA7 ALA8 PRO9 SER10 VAL11 SER12 VAL13 THR14 PRO15 GLY16 GLU17 SER18 VAL19 SER20 ILE21 SER22 CYS23 ARG24 SER25 SER26 LYS27 SER27A LEU27B LEU27C HIS27D SER27E ASN28 GLY29 ASN30 THR31 TYR32 LEU33 TYR34 TRP35 PHE36 LEU37 GLN38 ARG39 PRO40 GLY41 GLN42 SER43 PRO44 GLN45 LEU46 LEU47 ILE48 TYR49 ARG50 MET51 SER52 ASN53 LEU54 ALA55 SER56 GLY57 VAL58 PRO59 ASP60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ALA70 PHE71 THR72 LEU73 ARG74 ILE75 SER76 ARG77 VAL78 GLU79 ALA80 GLU81 ASP82 VAL83 GLY84 VAL85 TYR86 TYR87 CYS88 LEU89 GLN90 HIS91 LEU92 GLU93 TYR94 PRO95 PHE96 THR97 PHE98 GLY99 ALA100 GLY101 THR102 LYS103 LEU104 GLU105 LEU106 LYS107 ARG108 ALA109 ASP110 ALA111 ALA112 PRO113 THR114 VAL115 SER116 ILE117 PHE118 PRO119 PRO120 ALA130 SER131 VAL132 VAL133 CYS134 PHE135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 LYS142 ASP143 ILE144 ASN145 VAL146 LYS147 TRP148 LYS149 ILE150 ASP151 GLY152 SER153 GLU154 ARG155 GLN156 ASN157 GLY158 VAL159 LEU160 ASN161 SER162 TRP163 THR164 ASP165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 MET175 SER176 SER177 THR178 LEU179 THR180 LEU181 THR182 LYS183 ARG188 HIS189 ASN190 SER191 TYR192 THR193 CYS194 GLU195 ALA196 THR197 SER203 PRO204 ILE205 VAL206 LYS207 SER208 PHE209 ASN210
Unit 2 VAL2 GLN3 LEU4 GLN5 GLN6 PRO7 GLY8 ALA9 GLU10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 LEU20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 TYR27 THR28 PHE29 THR30 SER31 ASN32 TRP33 ILE34 ASN35 TRP36 VAL37 LYS38 GLN39 ARG40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 ASN50 ILE51 TYR52 PRO52A ASP53 SER54 TYR55 ARG56 THR57 ASN58 TYR59 ASN60 GLU61 LYS62 PHE63 LYS64 ARG65 LYS66 ALA67 THR68 LEU69 THR70 VAL71 ASP72 THR73 SER74 SER75 SER76 THR77 ALA78 TYR79 MET80 GLN81 LEU82 SER82A SER82B LEU82C THR83 SER84 ASP85 ASP86 SER87 ALA88 VAL89 TYR90 TYR91 CYS92 VAL93 ARG94 LYS95 HIS96 TYR97 SER98 TYR99 ASP100 GLY100A VAL100B VAL101 TYR102 TRP103 GLY104 GLN105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 ALA113 ALA114 LYS115 THR116 THR117 ALA118 PRO119 SER120 VAL121 TYR122 PRO123 LEU124 ALA125 PRO126 VAL127 VAL138 THR139 LEU140 GLY141 CYS142 LEU143 VAL144 LYS145 GLY146 TYR147 PHE148 PRO149 GLU150 PRO151 VAL152 THR153 LEU154 THR157 TRP158 VAL171 HIS172 THR173 PHE174 PRO175 ALA176 VAL177 LEU178 GLN179 SER180 ASP183 LEU184 TYR185 THR186 LEU187 SER188 SER189 SER190 VAL191 THR192 VAL193
Unit 3 ASP1 ILE2 VAL3 MET4 THR5 GLN6 ALA7 ALA8 PRO9 SER10 VAL11 SER12 VAL13 THR14 PRO15 GLY16 GLU17 SER18 VAL19 SER20 ILE21 SER22 CYS23 ARG24 SER25 SER26 LYS27 SER27A LEU27B LEU27C HIS27D SER27E ASN28 GLY29 ASN30 THR31 TYR32 LEU33 TYR34 TRP35 PHE36 LEU37 GLN38 ARG39 PRO40 GLY41 GLN42 SER43 PRO44 GLN45 LEU46 LEU47 ILE48 TYR49 ARG50 MET51 SER52 ASN53 LEU54 ALA55 SER56 GLY57 VAL58 PRO59 ASP60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ALA70 PHE71 THR72 LEU73 ARG74 ILE75 SER76 ARG77 VAL78 GLU79 ALA80 GLU81 ASP82 VAL83 GLY84 VAL85 TYR86 TYR87 CYS88 LEU89 GLN90 HIS91 LEU92 GLU93 TYR94 PRO95 PHE96 THR97 PHE98 GLY99 ALA100 GLY101 THR102 LYS103 LEU104 GLU105 LEU106 LYS107 ARG108 ALA109 ASP110 ALA111 ALA112 PRO113 THR114 VAL115 SER116 ILE117 PHE118 PRO119 PRO120 SER121 SER122 GLU123 GLN124 LEU125 THR126 SER127 GLY128 GLY129 ALA130 SER131 VAL132 VAL133 CYS134 PHE135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 LYS142 ASP143 ILE144 ASN145 VAL146 LYS147 TRP148 LYS149 ILE150 ASP151 GLY152 SER153 GLU154 ARG155 GLN156 ASN157 GLY158 VAL159 LEU160 ASN161 SER162 TRP163 THR164 ASP165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 MET175 SER176 SER177 THR178 LEU179 THR180 LEU181 THR182 LYS183 ASP184 GLU185 TYR186 GLU187 ARG188 HIS189 ASN190 SER191 TYR192 THR193 CYS194 GLU195 ALA196 THR197 SER203 PRO204 ILE205 VAL206 LYS207 SER208 PHE209 ASN210 ARG211 ASN212
Unit 4 VAL2 GLN3 LEU4 GLN5 GLN6 PRO7 GLY8 ALA9 GLU10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 LEU20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 TYR27 THR28 PHE29 THR30 SER31 ASN32 TRP33 ILE34 ASN35 TRP36 VAL37 LYS38 GLN39 ARG40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 ASN50 ILE51 TYR52 PRO52A ASP53 SER54 TYR55 ARG56 THR57 ASN58 TYR59 ASN60 GLU61 LYS62 PHE63 LYS64 ARG65 LYS66 ALA67 THR68 LEU69 THR70 VAL71 ASP72 THR73 SER74 SER75 SER76 THR77 ALA78 TYR79 MET80 GLN81 LEU82 SER82A SER82B LEU82C THR83 SER84 ASP85 ASP86 SER87 ALA88 VAL89 TYR90 TYR91 CYS92 VAL93 ARG94 LYS95 HIS96 TYR97 SER98 TYR99 ASP100 GLY100A VAL100B VAL101 TYR102 TRP103 GLY104 GLN105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 ALA113 ALA114 LYS115 THR116 THR117 ALA118 PRO119 SER120 VAL121 TYR122 PRO123 LEU124 ALA125 PRO126 SER136 SER137 VAL138 THR139 LEU140 GLY141 CYS142 LEU143 VAL144 LYS145 GLY146 TYR147 PHE148 PRO149 GLU150 PRO151 VAL152 THR153 LEU154 THR157 TRP158 ASN162 SER163 GLY164 SER165 LEU166 SER167 SER168 GLY169 VAL171 HIS172 THR173 PHE174 PRO175 ALA176 VAL177 LEU178 GLN179 SER180 ASP183 LEU184 TYR185 THR186 LEU187 SER188 SER189 SER190 VAL191 THR192 VAL193 ILE205 THR206 CYS208 ASN209 VAL210 ALA211 HIS212 PRO213 ALA214

Ligands
Unit 5 HAL601 SO4704
Unit 6 HAL602 SO4703

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany