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Sequence, Chains, Asymmetric and Biological Units

Title CATALYTIC DOMAIN OF THE ADENO ASSOCIATED VIRUS TYPE 5 REP PROTEIN
Keywords ENDONUCLEASE, REP, ROLLING CIRCLE REPLICATION, ADENO- ASSOCIATED VIRUS, VIRAL PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1M55     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   REP PROTEIN  A 193 1580 0
2  Protein   REP PROTEIN  B 193 1580 0
3  Ligand   REP PROTEIN  A 3 0 3
4  Ligand   REP PROTEIN  B 5 0 5
5 Water     675 0 675
total       1069 3160 683

Proteins
Unit 1 MET1 ALA2 THR3 PHE4 TYR5 GLU6 VAL7 ILE8 VAL9 ARG10 VAL11 PRO12 PHE13 ASP14 VAL15 GLU16 GLU17 HIS18 LEU19 PRO20 GLY21 ILE22 SER23 ASP24 SER25 PHE26 VAL27 ASP28 TRP29 VAL30 THR31 GLY32 GLN33 ILE34 TRP35 GLU36 LEU37 PRO38 PRO39 GLU40 SER41 ASP42 LEU43 ASN44 LEU45 THR46 LEU47 VAL48 GLU49 GLN50 PRO51 GLN52 LEU53 THR54 VAL55 ALA56 ASP57 ARG58 ILE59 ARG60 ARG61 VAL62 PHE63 LEU64 TYR65 GLU66 TRP67 ASN68 LYS69 PHE70 SER71 LYS72 GLN73 GLU74 SER75 LYS76 PHE77 PHE78 VAL79 GLN80 PHE81 GLU82 LYS83 GLY84 SER85 GLU86 TYR87 PHE88 HIS89 LEU90 HIS91 THR92 LEU93 VAL94 GLU95 THR96 SER97 GLY98 ILE99 SER100 SER101 MET102 VAL103 LEU104 GLY105 ARG106 TYR107 VAL108 SER109 GLN110 ILE111 ARG112 ALA113 GLN114 LEU115 VAL116 LYS117 VAL118 VAL119 PHE120 GLN121 GLY122 ILE123 GLU124 PRO125 GLN126 ILE127 ASN128 ASP129 TRP130 VAL131 ALA132 ILE133 THR134 LYS135 VAL136 LYS137 LYS138 GLY139 GLY140 ALA141 ASN142 LYS143 VAL144 VAL145 ASP146 SER147 GLY148 TYR149 ILE150 PRO151 ALA152 TYR153 LEU154 LEU155 PRO156 LYS157 VAL158 GLN159 PRO160 GLU161 LEU162 GLN163 TRP164 ALA165 TRP166 THR167 ASN168 LEU169 ASP170 GLU171 TYR172 LYS173 LEU174 ALA175 ALA176 LEU177 ASN178 LEU179 GLU180 GLU181 ARG182 LYS183 ARG184 LEU185 VAL186 ALA187 GLN188 PHE189 LEU190 ALA191 GLU192 SER193
Unit 2 MET1 ALA2 THR3 PHE4 TYR5 GLU6 VAL7 ILE8 VAL9 ARG10 VAL11 PRO12 PHE13 ASP14 VAL15 GLU16 GLU17 HIS18 LEU19 PRO20 GLY21 ILE22 SER23 ASP24 SER25 PHE26 VAL27 ASP28 TRP29 VAL30 THR31 GLY32 GLN33 ILE34 TRP35 GLU36 LEU37 PRO38 PRO39 GLU40 SER41 ASP42 LEU43 ASN44 LEU45 THR46 LEU47 VAL48 GLU49 GLN50 PRO51 GLN52 LEU53 THR54 VAL55 ALA56 ASP57 ARG58 ILE59 ARG60 ARG61 VAL62 PHE63 LEU64 TYR65 GLU66 TRP67 ASN68 LYS69 PHE70 SER71 LYS72 GLN73 GLU74 SER75 LYS76 PHE77 PHE78 VAL79 GLN80 PHE81 GLU82 LYS83 GLY84 SER85 GLU86 TYR87 PHE88 HIS89 LEU90 HIS91 THR92 LEU93 VAL94 GLU95 THR96 SER97 GLY98 ILE99 SER100 SER101 MET102 VAL103 LEU104 GLY105 ARG106 TYR107 VAL108 SER109 GLN110 ILE111 ARG112 ALA113 GLN114 LEU115 VAL116 LYS117 VAL118 VAL119 PHE120 GLN121 GLY122 ILE123 GLU124 PRO125 GLN126 ILE127 ASN128 ASP129 TRP130 VAL131 ALA132 ILE133 THR134 LYS135 VAL136 LYS137 LYS138 GLY139 GLY140 ALA141 ASN142 LYS143 VAL144 VAL145 ASP146 SER147 GLY148 TYR149 ILE150 PRO151 ALA152 TYR153 LEU154 LEU155 PRO156 LYS157 VAL158 GLN159 PRO160 GLU161 LEU162 GLN163 TRP164 ALA165 TRP166 THR167 ASN168 LEU169 ASP170 GLU171 TYR172 LYS173 LEU174 ALA175 ALA176 LEU177 ASN178 LEU179 GLU180 GLU181 ARG182 LYS183 ARG184 LEU185 VAL186 ALA187 GLN188 PHE189 LEU190 ALA191 GLU192 SER193

Ligands
Unit 3 ZN202 ZN205 CL301
Unit 4 ZN201 ZN203 ZN204 ZN206 CL302

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany