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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL MODEL OF HUMAN DECAY-ACCELERATING FACTOR BOUND TO 7 FROM CRYO-ELECTRON MICROSCOPY
Keywords DECAY-ACCELERATING FACTOR, SCR, ICOSAHEDRAL VIRUS, VIRUS-REC COMPLEX
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1M11     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DECAY-ACCELERATING FACTOR  R 243 243 0
2  Protein   COAT PROTEIN VP1  1 278 278 0
3  Protein   COAT PROTEIN VP2  2 254 254 0
4  Protein   COAT PROTEIN VP3  3 238 238 0
total       1013 1013 0

Proteins
Unit 1 ASP1 CYS2 GLY3 LEU4 PRO5 PRO6 ASP7 VAL8 PRO9 ASN10 ALA11 GLN12 PRO13 ALA14 LEU15 GLU16 GLY17 ARG18 THR19 SER20 PHE21 PRO22 GLU23 ASP24 THR25 VAL26 ILE27 THR28 TYR29 LYS30 CYS31 GLU32 GLU33 SER34 PHE35 VAL36 LYS37 ILE38 PRO39 GLY40 GLU41 LYS42 ASP43 SER44 VAL45 ILE46 CYS47 LEU48 LYS49 GLY50 SER51 GLN52 TRP53 SER54 ASP55 ILE56 GLU57 GLU58 PHE59 CYS60 ASN61 ARG62 SER63 CYS64 GLU65 VAL66 PRO67 THR68 ARG69 LEU70 ASN71 SER72 ALA73 SER74 LEU75 LYS76 GLN77 PRO78 TYR79 ILE80 THR81 GLN82 ASN83 TYR84 PHE85 PRO86 VAL87 GLY88 THR89 VAL90 VAL91 GLU92 TYR93 GLU94 CYS95 ARG96 PRO97 GLY98 TYR99 ARG100 ARG101 GLU102 PRO103 SER104 LEU105 SER106 PRO107 LYS108 LEU109 THR110 CYS111 LEU112 GLN113 ASN114 LEU115 LYS116 TRP117 SER118 THR119 ALA120 VAL121 GLU122 PHE123 CYS124 LYS125 LYS126 LYS127 SER128 CYS129 PRO130 ASN131 PRO132 GLY133 GLU134 ILE135 ARG136 ASN137 GLY138 GLN139 ILE140 ASP141 VAL142 PRO143 GLY144 GLY145 ILE146 LEU147 PHE148 GLY149 ALA150 THR151 ILE152 SER153 PHE154 SER155 CYS156 ASN157 THR158 GLY159 TYR160 LYS161 LEU162 PHE163 GLY164 SER165 THR166 SER167 SER168 PHE169 CYS170 LEU171 ILE172 SER173 GLY174 SER175 SER176 VAL177 GLN178 TRP179 SER180 ASP181 PRO182 LEU183 PRO184 GLU185 CYS186 ARG187 GLU188 ILE189 TYR190 CYS191 PRO192 ALA193 PRO194 PRO195 GLN196 ILE197 ASP198 ASN199 GLY200 ILE201 ILE202 GLN203 GLY204 GLU205 ARG206 ASP207 HIS208 TYR209 GLY210 TYR211 ARG212 GLN213 SER214 VAL215 THR216 TYR217 ALA218 CYS219 ASN220 LYS221 GLY222 PHE223 THR224 MET225 ILE226 GLY227 GLU228 HIS229 SER230 ILE231 TYR232 CYS233 THR234 VAL235 ASN236 ASN237 ASP238 GLU239 GLY240 GLU241 TRP242 SER243
Unit 2 GLY1 ASP2 THR3 GLU4 THR5 ALA6 ILE7 ASP8 ASN9 ALA10 ILE11 ALA12 ARG13 VAL14 ALA15 ASP16 THR17 VAL18 ALA19 SER20 GLY21 PRO22 SER23 ASN24 SER25 THR26 SER27 ILE28 PRO29 ALA30 LEU31 THR32 ALA33 VAL34 GLU35 THR36 GLY37 HIS38 THR39 SER40 GLN41 VAL42 GLU43 PRO44 SER45 ASP46 THR47 MET48 GLN49 THR50 ARG51 HIS52 VAL53 LYS54 ASN55 TYR56 HIS57 SER58 ARG59 SER60 GLU61 SER62 THR63 VAL64 GLU65 ASN66 PHE67 LEU68 SER69 ARG70 SER71 ALA72 CYS73 VAL74 TYR75 ILE76 GLU77 GLU78 TYR79 TYR80 THR81 LYS82 ASP83 GLN84 ASP85 ASN86 VAL87 ASN88 ARG89 TYR90 MET91 SER92 TRP93 THR94 ILE95 ASN96 ALA97 ARG98 ARG99 MET100 VAL101 GLN102 LEU103 ARG104 ARG105 LYS106 PHE107 GLU108 LEU109 PHE110 THR111 TYR112 MET113 ARG114 PHE115 ASP116 MET117 GLU118 ILE119 THR120 PHE121 VAL122 ILE123 THR124 SER125 ARG126 GLN127 LEU128 PRO129 GLY130 THR131 SER132 ILE133 ALA134 GLN135 ASP136 MET137 PRO138 PRO139 LEU140 THR141 HIS142 GLN143 ILE144 MET145 TYR146 ILE147 PRO148 PRO149 GLY150 GLY151 PRO152 VAL153 PRO154 ASN155 SER156 VAL157 THR158 ASP159 PHE160 ALA161 TRP162 GLN163 THR164 SER165 THR166 ASN167 PRO168 SER169 ILE170 PHE171 TRP172 THR173 GLU174 GLY175 ASN176 ALA177 PRO178 PRO179 ARG180 MET181 SER182 ILE183 PRO184 PHE185 ILE186 SER187 ILE188 GLY189 ASN190 ALA191 TYR192 SER193 ASN194 PHE195 TYR196 ASP197 GLY198 TRP199 SER200 HIS201 PHE202 SER203 GLN204 ASN205 GLY206 VAL207 TYR208 GLY209 TYR210 ASN211 ALA212 LEU213 ASN214 ASN215 MET216 GLY217 LYS218 LEU219 TYR220 ALA221 ARG222 HIS223 VAL224 ASN225 LYS226 ASP227 THR228 PRO229 TYR230 GLN231 MET232 SER233 SER234 THR235 ILE236 ARG237 VAL238 TYR239 PHE240 LYS241 PRO242 LYS243 HIS244 ILE245 ARG246 VAL247 TRP248 VAL249 PRO250 ARG251 PRO252 PRO253 ARG254 LEU255 SER256 PRO257 TYR258 ILE259 LYS260 SER261 SER262 ASN263 VAL264 ASN265 PHE266 ASN267 PRO268 THR269 ASN270 LEU271 THR272 ASP273 GLU274 ARG275 SER276 SER277 ILE278
Unit 3 GLY8 TYR9 SER10 ASP11 ARG12 VAL13 ARG14 SER15 LEU16 THR17 LEU18 GLY19 ASN20 SER21 THR22 ILE23 THR24 THR25 GLN26 GLU27 SER28 ALA29 ASN30 VAL31 VAL32 VAL33 GLY34 TYR35 GLY36 ARG37 TRP38 PRO39 GLU40 TYR41 LEU42 ARG43 ASP44 ASP45 GLU46 ALA47 THR48 ALA49 GLU50 ASP51 GLN52 PRO53 THR54 GLN55 PRO56 ASP57 VAL58 ALA59 THR60 CYS61 ARG62 PHE63 TYR64 THR65 LEU66 GLU67 SER68 VAL69 GLN70 TRP71 GLU72 LYS73 ASN74 SER75 ALA76 GLY77 TRP78 TRP79 TRP80 LYS81 PHE82 PRO83 GLU84 ALA85 LEU86 LYS87 ASP88 MET89 GLY90 LEU91 PHE92 GLY93 GLN94 ASN95 MET96 LEU97 TYR98 HIS99 TYR100 LEU101 GLY102 ARG103 ALA104 GLY105 TYR106 THR107 ILE108 HIS109 VAL110 GLN111 CYS112 ASN113 ALA114 SER115 LYS116 PHE117 HIS118 GLN119 GLY120 CYS121 LEU122 LEU123 VAL124 VAL125 CYS126 VAL127 PRO128 GLU129 ALA130 GLU131 MET132 GLY133 CYS134 SER135 GLN136 THR137 ASP138 LYS139 GLU140 VAL141 ALA142 ALA143 MET144 ASN145 LEU146 THR147 LYS148 GLY149 GLU150 ALA151 ALA152 HIS153 LYS154 PHE155 GLU156 PRO157 THR158 LYS159 THR160 THR161 GLY162 GLU163 HIS164 THR165 VAL166 GLN167 SER168 ILE169 VAL170 CYS171 ASN172 ALA173 GLY174 MET175 GLY176 VAL177 GLY178 VAL179 GLY180 ASN181 LEU182 THR183 ILE184 TYR185 PRO186 HIS187 GLN188 TRP189 ILE190 ASN191 LEU192 ARG193 THR194 ASN195 ASN196 CYS197 ALA198 THR199 ILE200 VAL201 MET202 PRO203 TYR204 VAL205 ASN206 SER207 VAL208 PRO209 MET210 ASP211 ASN212 MET213 PHE214 ARG215 HIS216 TYR217 ASN218 PHE219 THR220 LEU221 MET222 VAL223 ILE224 PRO225 PHE226 ALA227 PRO228 LEU229 ASP230 TYR231 ALA232 ALA233 GLN234 ALA235 SER236 GLU237 TYR238 VAL239 PRO240 VAL241 THR242 VAL243 THR244 ILE245 ALA246 PRO247 MET248 CYS249 ALA250 GLU251 TYR252 ASN253 GLY254 LEU255 ARG256 LEU257 ALA258 TYR259 GLN260 GLN261
Unit 4 GLY1 PHE2 PRO3 VAL4 LEU5 ASN6 THR7 PRO8 GLY9 SER10 ASN11 GLN12 PHE13 MET14 THR15 SER16 ASP17 ASP18 PHE19 GLN20 SER21 PRO22 SER23 ALA24 MET25 PRO26 GLN27 PHE28 ASP29 VAL30 THR31 PRO32 HIS33 MET34 ASP35 ILE36 PRO37 GLY38 GLU39 VAL40 HIS41 ASN42 LEU43 MET44 GLU45 ILE46 ALA47 GLU48 VAL49 ASP50 SER51 VAL52 VAL53 PRO54 VAL55 ASN56 ASN57 ILE58 LYS59 VAL60 ASN61 LEU62 GLN63 SER64 MET65 ASP66 ALA67 TYR68 HIS69 ILE70 GLU71 VAL72 ASN73 THR74 GLY75 ASN76 HIS77 GLN78 GLY79 GLU80 LYS81 ILE82 PHE83 ALA84 PHE85 GLN86 MET87 GLN88 PRO89 GLY90 LEU91 GLU92 SER93 VAL94 PHE95 LYS96 ARG97 THR98 LEU99 MET100 GLY101 GLU102 ILE103 LEU104 ASN105 TYR106 TYR107 ALA108 HIS109 TRP110 SER111 GLY112 SER113 ILE114 LYS115 LEU116 THR117 PHE118 THR119 PHE120 CYS121 GLY122 SER123 ALA124 MET125 ALA126 THR127 GLY128 LYS129 LEU130 LEU131 LEU132 ALA133 TYR134 SER135 PRO136 PRO137 GLY138 ALA139 ASP140 VAL141 PRO142 ALA143 THR144 ARG145 LYS146 GLN147 ALA148 MET149 LEU150 GLY151 THR152 HIS153 MET154 ILE155 TRP156 ASP157 ILE158 GLY159 LEU160 GLN161 SER162 SER163 CYS164 VAL165 LEU166 CYS167 ILE168 PRO169 TRP170 ILE171 SER172 GLN173 THR174 HIS175 TYR176 ARG177 LEU178 VAL179 GLN180 GLN181 ASP182 GLU183 TYR184 THR185 SER186 ALA187 GLY188 ASN189 VAL190 THR191 CYS192 TRP193 TYR194 GLN195 THR196 GLY197 ILE198 VAL199 VAL200 PRO201 PRO202 GLY203 THR204 PRO205 ASN206 LYS207 CYS208 VAL209 VAL210 LEU211 CYS212 PHE213 ALA214 SER215 ALA216 CYS217 ASN218 ASP219 PHE220 SER221 VAL222 ARG223 MET224 LEU225 ARG226 ASP227 THR228 PRO229 PHE230 ILE231 GLY232 GLN233 THR234 ALA235 LEU236 LEU237 GLN238

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany