Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF BACTERIOPHAGE T7 ENDONUCLEASE I WITH A WILD-TYPE ACTIVE SITE AND BOUND MANGANESE IONS
Keywords HOLLIDAY JUNCTION RESOLVASE, HOMODIMER, DOMAIN SWAPPED, COMPOSITE ACTIVE SITE, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1M0D     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ENDODEOXYRIBONUCLEASE I  A 129 1038 0
2  Protein   ENDODEOXYRIBONUCLEASE I  B 129 1064 0
3  Protein   ENDODEOXYRIBONUCLEASE I  C 129 1004 0
4  Protein   ENDODEOXYRIBONUCLEASE I  D 129 1019 0
5  Ligand   ENDODEOXYRIBONUCLEASE I  A 3 0 7
6  Ligand   ENDODEOXYRIBONUCLEASE I  B 3 0 7
7  Ligand   ENDODEOXYRIBONUCLEASE I  C 3 0 7
8  Ligand   ENDODEOXYRIBONUCLEASE I  D 3 0 7
9 Water     473 0 473
total       1001 4125 501

Proteins
Unit 1 SER17 GLY18 LEU19 GLU20 ASP21 LYS22 VAL23 SER24 LYS25 GLN26 LEU27 GLU28 SER29 LYS30 GLY31 ILE32 LYS33 PHE34 GLU35 TYR36 GLU37 GLU38 TRP39 LYS40 VAL41 PRO42 TYR43 VAL44 ILE45 PRO46 ALA47 SER48 ASN49 HIS50 THR51 TYR52 THR53 PRO54 ASP55 PHE56 LEU57 LEU58 PRO59 ASN60 GLY61 ILE62 PHE63 VAL64 GLU65 THR66 LYS67 GLY68 LEU69 TRP70 GLU71 SER72 ASP73 ASP74 ARG75 LYS76 LYS77 HIS78 LEU79 LEU80 ILE81 ARG82 GLU83 GLN84 HIS85 PRO86 GLU87 LEU88 ASP89 ILE90 ARG91 ILE92 VAL93 PHE94 SER95 SER96 SER97 ARG98 THR99 LYS100 LEU101 TYR102 LYS103 GLY104 SER105 PRO106 THR107 SER108 TYR109 GLY110 GLU111 PHE112 CYS113 GLU114 LYS115 HIS116 GLY117 ILE118 LYS119 PHE120 ALA121 ASP122 LYS123 LEU124 ILE125 PRO126 ALA127 GLU128 TRP129 ILE130 LYS131 GLU132 PRO133 LYS134 LYS135 GLU136 VAL137 PRO138 PHE139 ASP140 ARG141 LEU142 LYS143 ARG144 LYS145
Unit 2 SER17 GLY18 LEU19 GLU20 ASP21 LYS22 VAL23 SER24 LYS25 GLN26 LEU27 GLU28 SER29 LYS30 GLY31 ILE32 LYS33 PHE34 GLU35 TYR36 GLU37 GLU38 TRP39 LYS40 VAL41 PRO42 TYR43 VAL44 ILE45 PRO46 ALA47 SER48 ASN49 HIS50 THR51 TYR52 THR53 PRO54 ASP55 PHE56 LEU57 LEU58 PRO59 ASN60 GLY61 ILE62 PHE63 VAL64 GLU65 THR66 LYS67 GLY68 LEU69 TRP70 GLU71 SER72 ASP73 ASP74 ARG75 LYS76 LYS77 HIS78 LEU79 LEU80 ILE81 ARG82 GLU83 GLN84 HIS85 PRO86 GLU87 LEU88 ASP89 ILE90 ARG91 ILE92 VAL93 PHE94 SER95 SER96 SER97 ARG98 THR99 LYS100 LEU101 TYR102 LYS103 GLY104 SER105 PRO106 THR107 SER108 TYR109 GLY110 GLU111 PHE112 CYS113 GLU114 LYS115 HIS116 GLY117 ILE118 LYS119 PHE120 ALA121 ASP122 LYS123 LEU124 ILE125 PRO126 ALA127 GLU128 TRP129 ILE130 LYS131 GLU132 PRO133 LYS134 LYS135 GLU136 VAL137 PRO138 PHE139 ASP140 ARG141 LEU142 LYS143 ARG144 LYS145
Unit 3 SER17 GLY18 LEU19 GLU20 ASP21 LYS22 VAL23 SER24 LYS25 GLN26 LEU27 GLU28 SER29 LYS30 GLY31 ILE32 LYS33 PHE34 GLU35 TYR36 GLU37 GLU38 TRP39 LYS40 VAL41 PRO42 TYR43 VAL44 ILE45 PRO46 ALA47 SER48 ASN49 HIS50 THR51 TYR52 THR53 PRO54 ASP55 PHE56 LEU57 LEU58 PRO59 ASN60 GLY61 ILE62 PHE63 VAL64 GLU65 THR66 LYS67 GLY68 LEU69 TRP70 GLU71 SER72 ASP73 ASP74 ARG75 LYS76 LYS77 HIS78 LEU79 LEU80 ILE81 ARG82 GLU83 GLN84 HIS85 PRO86 GLU87 LEU88 ASP89 ILE90 ARG91 ILE92 VAL93 PHE94 SER95 SER96 SER97 ARG98 THR99 LYS100 LEU101 TYR102 LYS103 GLY104 SER105 PRO106 THR107 SER108 TYR109 GLY110 GLU111 PHE112 CYS113 GLU114 LYS115 HIS116 GLY117 ILE118 LYS119 PHE120 ALA121 ASP122 LYS123 LEU124 ILE125 PRO126 ALA127 GLU128 TRP129 ILE130 LYS131 GLU132 PRO133 LYS134 LYS135 GLU136 VAL137 PRO138 PHE139 ASP140 ARG141 LEU142 LYS143 ARG144 LYS145
Unit 4 SER17 GLY18 LEU19 GLU20 ASP21 LYS22 VAL23 SER24 LYS25 GLN26 LEU27 GLU28 SER29 LYS30 GLY31 ILE32 LYS33 PHE34 GLU35 TYR36 GLU37 GLU38 TRP39 LYS40 VAL41 PRO42 TYR43 VAL44 ILE45 PRO46 ALA47 SER48 ASN49 HIS50 THR51 TYR52 THR53 PRO54 ASP55 PHE56 LEU57 LEU58 PRO59 ASN60 GLY61 ILE62 PHE63 VAL64 GLU65 THR66 LYS67 GLY68 LEU69 TRP70 GLU71 SER72 ASP73 ASP74 ARG75 LYS76 LYS77 HIS78 LEU79 LEU80 ILE81 ARG82 GLU83 GLN84 HIS85 PRO86 GLU87 LEU88 ASP89 ILE90 ARG91 ILE92 VAL93 PHE94 SER95 SER96 SER97 ARG98 THR99 LYS100 LEU101 TYR102 LYS103 GLY104 SER105 PRO106 THR107 SER108 TYR109 GLY110 GLU111 PHE112 CYS113 GLU114 LYS115 HIS116 GLY117 ILE118 LYS119 PHE120 ALA121 ASP122 LYS123 LEU124 ILE125 PRO126 ALA127 GLU128 TRP129 ILE130 LYS131 GLU132 PRO133 LYS134 LYS135 GLU136 VAL137 PRO138 PHE139 ASP140 ARG141 LEU142 LYS143 ARG144 LYS145

Ligands
Unit 5 MN1 MN2 SO41001
Unit 6 MN3 MN4 SO41002
Unit 7 MN5 MN6 SO41003
Unit 8 MN7 MN8 SO41004

Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany