1LYR - Sequence, Chains, Asymmetric and Biological Units

• Title: THEORETICAL MODEL OF BOVINE AP LYASE, BAP1
• Keywords: THEORETICAL MODEL, ENDONUCLEASE, AP LYASE, DNA REPAIR ENZYME
• Experiment: theoretical model
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1LYR	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE	A	279	2226	0
2	DNA		X	15	305	20
3	DNA		Y	14	288	0
total				308	2819	20

Proteins

Unit 1

GLU 39 GLY 40 ALA 41 VAL 42 LEU 43 TYR 44 GLU 45 ASP 46 PRO 47 PRO 48 ASP 49 GLN 50 LYS 51 THR 52 SER 53 PRO 54 SER 55 GLY 56 LYS 57 SER 58 ALA 59 THR 60 LEU 61 LYS 62 ILE 63 CYS 64 SER 65 TRP 66 ASN 67 VAL 68 ASP 69 GLY 70 LEU 71 ARG 72 ALA 73 TRP 74 ILE 75 LYS 76 LYS 77 LYS 78 GLY 79 LEU 80 ASP 81 TRP 82 VAL 83 LYS 84 GLU 85 GLU 86 ALA 87 PRO 88 ASP 89 ILE 90 LEU 91 CYS 92 LEU 93 GLN 94 GLU 95 THR 96 LYS 97 CYS 98 SER 99 GLU 100 ASN 101 LYS 102 LEU 103 PRO 104 VAL 105 GLU 106 LEU 107 GLN 108 GLU 109 LEU 110 SER 111 GLY 112 LEU 113 SER 114 HIS 115 GLN 116 TYR 117 TRP 118 SER 119 ALA 120 PRO 121 SER 122 ASP 123 LYS 124 GLU 125 GLY 126 TYR 127 SER 128 GLY 129 VAL 130 GLY 131 LEU 132 LEU 133 SER 134 ARG 135 GLN 136 CYS 137 PRO 138 LEU 139 LYS 140 VAL 141 SER 142 TYR 143 GLY 144 ILE 145 GLY 146 GLU 147 GLU 148 GLU 149 HIS 150 ASP 151 GLN 152 GLU 153 GLY 154 ARG 155 VAL 156 ILE 157 VAL 158 ALA 159 GLU 160 TYR 161 ASP 162 ALA 163 PHE 164 VAL 165 LEU 166 VAL 167 THR 168 ALA 169 TYR 170 VAL 171 PRO 172 ASN 173 ALA 174 GLY 175 ARG 176 GLY 177 LEU 178 VAL 179 ARG 180 LEU 181 GLU 182 TYR 183 ARG 184 GLN 185 ARG 186 TRP 187 ASP 188 GLU 189 ALA 190 PHE 191 ARG 192 LYS 193 PHE 194 LEU 195 LYS 196 GLY 197 LEU 198 ALA 199 SER 200 ARG 201 LYS 202 PRO 203 LEU 204 VAL 205 LEU 206 CYS 207 GLY 208 ASP 209 LEU 210 ASN 211 VAL 212 ALA 213 HIS 214 GLU 215 GLU 216 ILE 217 ASP 218 LEU 219 ARG 220 ASN 221 PRO 222 LYS 223 GLY 224 ASN 225 LYS 226 LYS 227 ASN 228 ALA 229 GLY 230 PHE 231 THR 232 PRO 233 GLN 234 GLU 235 ARG 236 GLN 237 GLY 238 PHE 239 GLY 240 GLU 241 LEU 242 LEU 243 GLN 244 ALA 245 VAL 246 PRO 247 LEU 248 THR 249 ASP 250 SER 251 PHE 252 ARG 253 HIS 254 LEU 255 TYR 256 PRO 257 ASN 258 THR 259 ALA 260 TYR 261 ALA 262 TYR 263 THR 264 PHE 265 TRP 266 THR 267 TYR 268 MET 269 MET 270 ASN 271 ALA 272 ARG 273 SER 274 LYS 275 ASN 276 VAL 277 GLY 278 TRP 279 ARG 280 LEU 281 ASP 282 TYR 283 PHE 284 LEU 285 LEU 286 SER 287 GLN 288 SER 289 VAL 290 LEU 291 PRO 292 ALA 293 LEU 294 CYS 295 ASP 296 SER 297 LYS 298 ILE 299 ARG 300 SER 301 LYS 302 ALA 303 LEU 304 GLY 305 SER 306 ASP 307 HIS 308 CYS 309 PRO 310 ILE 311 THR 312 LEU 313 TYR 314 LEU 315 ALA 316 LEU 317

Nucleic acids

Unit 2	G 1 C 2 G 3 T 4 C 5 C 6 3DR 7 C 8 G 9 A 10 C 11 G 12 A 13 C 14 G 15
Unit 3	G 17 T 18 C 19 G 20 T 21 C 22 G 23 G 24 G 25 G 26 A 27 C 28 G 29 C 30