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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN RABBIT CYTOSOLIC SE HYDROXYMETHYLTRANSFERASE AND TRIGLU-5-FORMYL-TETRAHYDROFOLA
Keywords ASYMMETRIC TETRAMER, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1LS3     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SERINE HYDROXYMETHYLTRANSFERASE  A 465 3480 0
2  Protein   SERINE HYDROXYMETHYLTRANSFERASE  B 455 3376 0
3  Protein   SERINE HYDROXYMETHYLTRANSFERASE  C 465 3470 0
4  Protein   SERINE HYDROXYMETHYLTRANSFERASE  D 456 3374 0
5  Protein   SERINE HYDROXYMETHYLTRANSFERASE  A 2 0 20
6  Ligand   SERINE HYDROXYMETHYLTRANSFERASE  B 1 0 15
7  Protein   SERINE HYDROXYMETHYLTRANSFERASE  C 1 0 5
8  Ligand   SERINE HYDROXYMETHYLTRANSFERASE  B 3 0 64
9  Ligand   SERINE HYDROXYMETHYLTRANSFERASE  C 2 0 21
10  Ligand   SERINE HYDROXYMETHYLTRANSFERASE  D 3 0 73
11 Water     378 0 378
total       2231 13700 576
Proteins
Unit 1 ALA-10 LEU-9 TRP-8 SER-7 SER-6 HIS-5 GLU-4 GLN-3 MET1 LEU2 ALA3 GLN4 PRO5 LEU6 LYS7 ASP10 SER11 ASP12 ALA13 GLU14 VAL15 TYR16 ASP17 ILE18 ILE19 LYS20 LYS21 GLU22 SER23 ASN24 ARG25 GLN26 ARG27 VAL28 GLY29 LEU30 GLU31 LEU32 ILE33 ALA34 SER35 GLU36 ASN37 PHE38 ALA39 SER40 ARG41 ALA42 VAL43 LEU44 GLU45 ALA46 LEU47 GLY48 SER49 CYS50 LEU51 ASN52 ASN53 LYS54 TYR55 SER56 GLU57 GLY58 TYR59 PRO60 GLY61 GLN62 ARG63 TYR64 TYR65 GLY66 GLY67 THR68 GLU69 HIS70 ILE71 ASP72 GLU73 LEU74 GLU75 THR76 LEU77 CYS78 GLN79 LYS80 ARG81 ALA82 LEU83 GLN84 ALA85 TYR86 GLY87 LEU88 ASP89 PRO89A GLN89B CYS89C TRP90 GLY91 VAL91A ASN92 VAL93 GLN94 PRO95 TYR96 SER97 GLY98 SER99 PRO100 ALA101 ASN102 PHE103 ALA104 VAL105 TYR106 THR107 ALA108 LEU109 VAL110 GLU111 PRO112 HIS112A GLY113 ARG115 ILE116 MET117 GLY118 LEU119 ASP120 LEU121 PRO122 ASP123 GLY124 GLY125 HIS126 LEU127 THR128 HIS129 GLY130 PHE131 MET132 THR133 ASP134 LYS134A LYS134B LYS134C ILE135 SER136 ALA137 THR138 SER138A ILE139 PHE140 PHE140A GLU141 SER142 MET143 ALA144 TYR145 LYS146 VAL147 ASN148 PRO149 ASP149A THR150 GLY151 TYR152 ILE153 ASP154 TYR155 ASP156 ARG157 LEU158 GLU159 GLU160 ASN161 ALA162 ARG163 LEU164 PHE165 HIS166 PRO167 LYS168 LEU169 ILE170 ILE171 ALA172 GLY173 THR174 SER175 CYS176 TYR177 SER178 ARG179 ASN180 LEU181 ASP182 TYR183 GLY184 ARG185 LEU186 ARG187 LYS188 ILE189 ALA190 ASP191 GLU192 ASN193 GLY194 ALA195 TYR196 LEU197 MET198 ALA199 ASP200 MET201 ALA202 HIS203 ILE204 SER205 GLY206 LEU207 VAL208 VAL209 ALA210 GLY211 VAL212 VAL213 PRO214 SER215 PRO216 PHE217 GLU218 HIS219 CYS220 HIS221 VAL222 VAL223 THR224 THR225 THR226 THR227 HIS228 LYS229 THR230 LEU231 ARG232 GLY233 CYS234 ARG235 ALA236 GLY237 MET238 ILE239 PHE240 TYR241 ARG242 ARG243 GLY244 VAL244A ARG244B SER244C VAL244D ASP244E LEU248 TYR249 ASN250 LEU250A GLU250B SER251 LEU252 ILE252A ASN253 SER254 ALA255 VAL256 PHE257 PRO258 GLY259 LEU260 GLN261 GLY262 GLY263 PRO264 HIS265 ASN266 HIS267 ALA268 ILE269 ALA270 GLY271 VAL272 ALA273 VAL274 ALA275 LEU276 LYS277 GLN278 ALA279 MET280 THR281 PRO282 GLU283 PHE284 LYS285 GLU286 TYR287 GLN288 ARG289 GLN290 VAL291 VAL292 ALA293 ASN294 CYS295 ARG296 ALA297 LEU298 SER299 ALA300 ALA301 LEU302 VAL303 GLU304 LEU305 GLY306 TYR307 LYS308 ILE309 VAL310 THR311 GLY312 GLY313 SER314 ASP315 ASN316 HIS317 LEU318 ILE319 LEU320 VAL321 ASP322 LEU323 ARG324 SER325 LYS326 GLY327 THR328 ASP329 GLY330 GLY331 ARG332 ALA333 GLU334 LYS335 VAL336 LEU337 GLU338 ALA339 CYS340 SER341 ILE342 ALA343 CYS344 ASN345 LYS346 ASN347 THR348 CYS349 PRO350 GLY351 ASP352 LYS354 SER355 ALA356 LEU357 ARG358 PRO359 SER360 GLY361 LEU362 ARG363 LEU364 GLY365 THR366 PRO367 ALA368 LEU369 THR370 SER371 ARG372 GLY373 LEU374 LEU374A GLU374B LYS375 ASP376 PHE377 GLN378 LYS380 VAL382 ALA383 HIS384 PHE385 ILE386 HIS387 ARG388 GLY389 ILE390 GLU391 LEU391A THR392 VAL393 GLN394 ILE394A GLN394B ASP394C ASP395 THR396 GLY396A PRO396B ARG396C ALA397 THR398 LEU399 LYS399A GLU399B PHE399C LYS399D GLU400 LYS401 LEU402 ALA403 GLY404 ASP404A GLU404C LYS405 HIS406 GLN406A ARG407 ALA408 VAL409 ARG410 ALA411 LEU411A ARG412 GLN413 GLU414 VAL415 GLU415A SER415B PHE416 ALA417 ALA418 LEU418A PHE418B PRO418C LEU418D PRO418E GLY418F LEU418G PRO418H GLY418I PHE418J
Unit 2 TRP-8 SER-7 SER-6 HIS-5 GLU-4 GLN-3 MET1 LEU2 ALA3 GLN4 PRO5 LEU6 LYS7 ASP10 SER11 ASP12 ALA13 GLU14 VAL15 TYR16 ASP17 ILE18 ILE19 LYS20 LYS21 GLU22 SER23 ASN24 ARG25 GLN26 ARG27 VAL28 GLY29 LEU30 GLU31 LEU32 ILE33 ALA34 SER35 GLU36 ASN37 PHE38 ALA39 SER40 ARG41 ALA42 VAL43 LEU44 GLU45 ALA46 LEU47 GLY48 SER49 CYS50 LEU51 ASN52 ASN53 LYS54 TYR55 SER56 GLU57 GLY58 TYR59 PRO60 GLY61 GLN62 ARG63 TYR64 TYR65 GLY66 GLY67 THR68 GLU69 HIS70 ILE71 ASP72 GLU73 LEU74 GLU75 THR76 LEU77 CYS78 GLN79 LYS80 ARG81 ALA82 LEU83 GLN84 ALA85 TYR86 GLY87 LEU88 ASP89 PRO89A GLN89B CYS89C TRP90 GLY91 VAL91A ASN92 VAL93 GLN94 PRO95 TYR96 SER97 GLY98 SER99 PRO100 ALA101 ASN102 PHE103 ALA104 VAL105 TYR106 THR107 ALA108 LEU109 VAL110 GLU111 PRO112 HIS112A GLY113 ARG115 ILE116 MET117 GLY118 LEU119 ASP120 LEU121 PRO122 ASP123 GLY124 GLY125 HIS126 LEU127 THR128 HIS129 GLY130 PHE131 MET132 THR133 ASP134 LYS134A LYS134B LYS134C ILE135 SER136 ALA137 THR138 SER138A ILE139 PHE140 PHE140A GLU141 SER142 MET143 ALA144 TYR145 LYS146 VAL147 ASN148 PRO149 ASP149A THR150 GLY151 TYR152 ILE153 ASP154 TYR155 ASP156 ARG157 LEU158 GLU159 GLU160 ASN161 ALA162 ARG163 LEU164 PHE165 HIS166 PRO167 LYS168 LEU169 ILE170 ILE171 ALA172 GLY173 THR174 SER175 CYS176 TYR177 SER178 ARG179 ASN180 LEU181 ASP182 TYR183 GLY184 ARG185 LEU186 ARG187 LYS188 ILE189 ALA190 ASP191 GLU192 ASN193 GLY194 ALA195 TYR196 LEU197 MET198 ALA199 ASP200 MET201 ALA202 HIS203 ILE204 SER205 GLY206 LEU207 VAL208 VAL209 ALA210 GLY211 VAL212 VAL213 PRO214 SER215 PRO216 PHE217 GLU218 HIS219 CYS220 HIS221 VAL222 VAL223 THR224 THR225 THR226 THR227 HIS228 LYS229 THR230 LEU231 ARG232 GLY233 CYS234 ARG235 ALA236 GLY237 MET238 ILE239 PHE240 TYR241 ARG242 ARG243 GLY244 VAL244A ARG244B SER244C VAL244D ASP244E PRO244F TYR249 ASN250 LEU250A GLU250B SER251 LEU252 ILE252A ASN253 SER254 ALA255 VAL256 PHE257 PRO258 GLY259 LEU260 GLN261 GLY262 GLY263 PRO264 HIS265 ASN266 HIS267 ALA268 ILE269 ALA270 GLY271 VAL272 ALA273 VAL274 ALA275 LEU276 LYS277 GLN278 ALA279 MET280 THR281 PRO282 GLU283 PHE284 LYS285 GLU286 TYR287 GLN288 ARG289 GLN290 VAL291 VAL292 ALA293 ASN294 CYS295 ARG296 ALA297 LEU298 SER299 ALA300 ALA301 LEU302 VAL303 GLU304 LEU305 GLY306 TYR307 LYS308 ILE309 VAL310 THR311 GLY312 GLY313 SER314 ASP315 ASN316 HIS317 LEU318 ILE319 LEU320 VAL321 ASP322 LEU323 ARG324 LYS326 GLY327 THR328 ASP329 GLY330 GLY331 ARG332 ALA333 GLU334 LYS335 VAL336 LEU337 GLU338 ALA339 CYS340 SER341 ILE342 ALA343 CYS344 ASN345 LYS346 ASN347 THR348 CYS349 PRO350 GLY351 LYS354 LEU357 ARG358 PRO359 SER360 GLY361 LEU362 ARG363 LEU364 GLY365 THR366 PRO367 ALA368 LEU369 THR370 SER371 ARG372 GLY373 LEU374 LEU374A GLU374B LYS375 ASP376 PHE377 GLN378 LYS380 VAL382 ALA383 HIS384 PHE385 ILE386 HIS387 ARG388 GLY389 ILE390 GLU391 LEU391A THR392 VAL393 GLN394 ILE394A GLN394B ASP394C ASP395 THR396 GLY396A PRO396B ARG396C ALA397 THR398 LEU399 LYS399A GLU399B PHE399C LYS399D GLU400 ASP404A GLU404B LYS405 HIS406 GLN406A ARG407 ALA408 VAL409 ARG410 ALA411 LEU411A ARG412 GLN413 GLU414 VAL415 GLU415A SER415B PHE416 ALA417 ALA418 LEU418A PHE418B PRO418C LEU418D PRO418E GLY418F LEU418G PRO418H GLY418I PHE418J
Unit 3 ALA-10 LEU-9 TRP-8 SER-7 SER-6 HIS-5 GLU-4 GLN-3 MET1 LEU2 ALA3 GLN4 PRO5 LEU6 LYS7 ASP10 SER11 ASP12 ALA13 GLU14 VAL15 TYR16 ASP17 ILE18 ILE19 LYS20 LYS21 GLU22 SER23 ASN24 ARG25 GLN26 ARG27 VAL28 GLY29 LEU30 GLU31 LEU32 ILE33 ALA34 SER35 GLU36 ASN37 PHE38 ALA39 SER40 ARG41 ALA42 VAL43 LEU44 GLU45 ALA46 LEU47 GLY48 SER49 CYS50 LEU51 ASN52 ASN53 LYS54 TYR55 SER56 GLU57 GLY58 TYR59 PRO60 GLY61 GLN62 ARG63 TYR64 TYR65 GLY66 GLY67 THR68 GLU69 HIS70 ILE71 ASP72 GLU73 LEU74 GLU75 THR76 LEU77 CYS78 GLN79 LYS80 ARG81 ALA82 LEU83 GLN84 ALA85 TYR86 GLY87 LEU88 ASP89 PRO89A GLN89B CYS89C TRP90 GLY91 VAL91A ASN92 VAL93 GLN94 PRO95 TYR96 SER97 GLY98 SER99 PRO100 ALA101 ASN102 PHE103 ALA104 VAL105 TYR106 THR107 ALA108 LEU109 VAL110 GLU111 PRO112 HIS112A GLY113 ARG115 ILE116 MET117 GLY118 LEU119 ASP120 LEU121 PRO122 ASP123 GLY124 GLY125 HIS126 LEU127 THR128 HIS129 GLY130 PHE131 MET132 THR133 ASP134 LYS134A LYS134B LYS134C ILE135 SER136 ALA137 THR138 SER138A ILE139 PHE140 PHE140A GLU141 SER142 MET143 ALA144 TYR145 LYS146 VAL147 ASN148 PRO149 ASP149A THR150 GLY151 TYR152 ILE153 ASP154 TYR155 ASP156 ARG157 LEU158 GLU159 GLU160 ASN161 ALA162 ARG163 LEU164 PHE165 HIS166 PRO167 LYS168 LEU169 ILE170 ILE171 ALA172 GLY173 THR174 SER175 CYS176 TYR177 SER178 ARG179 ASN180 LEU181 ASP182 TYR183 GLY184 ARG185 LEU186 ARG187 LYS188 ILE189 ALA190 ASP191 GLU192 ASN193 GLY194 ALA195 TYR196 LEU197 MET198 ALA199 ASP200 MET201 ALA202 HIS203 ILE204 SER205 GLY206 LEU207 VAL208 VAL209 ALA210 GLY211 VAL212 VAL213 PRO214 SER215 PRO216 PHE217 GLU218 HIS219 CYS220 HIS221 VAL222 VAL223 THR224 THR225 THR226 THR227 HIS228 LYS229 THR230 LEU231 ARG232 GLY233 CYS234 ARG235 ALA236 GLY237 MET238 ILE239 PHE240 TYR241 ARG242 ARG243 GLY244 VAL244A ARG244B LYS245 GLU246 ILE247 LEU248 TYR249 ASN250 LEU250A GLU250B SER251 LEU252 ILE252A ASN253 SER254 ALA255 VAL256 PHE257 PRO258 GLY259 LEU260 GLN261 GLY262 GLY263 PRO264 HIS265 ASN266 HIS267 ALA268 ILE269 ALA270 GLY271 VAL272 ALA273 VAL274 ALA275 LEU276 LYS277 GLN278 ALA279 MET280 THR281 PRO282 GLU283 PHE284 LYS285 GLU286 TYR287 GLN288 ARG289 GLN290 VAL291 VAL292 ALA293 ASN294 CYS295 ARG296 ALA297 LEU298 SER299 ALA300 ALA301 LEU302 VAL303 GLU304 LEU305 GLY306 TYR307 LYS308 ILE309 VAL310 THR311 GLY312 GLY313 SER314 ASP315 ASN316 HIS317 LEU318 ILE319 LEU320 VAL321 ASP322 LEU323 ARG324 SER325 LYS326 GLY327 THR328 ASP329 GLY330 GLY331 ARG332 ALA333 GLU334 LYS335 VAL336 LEU337 GLU338 ALA339 CYS340 SER341 ILE342 ALA343 CYS344 ASN345 LYS346 ASN347 THR348 CYS349 PRO350 GLY351 ASP352 LYS354 SER355 ALA356 LEU357 ARG358 PRO359 SER360 GLY361 LEU362 ARG363 LEU364 GLY365 THR366 PRO367 ALA368 LEU369 THR370 SER371 ARG372 GLY373 LEU374 LEU374A GLU374B LYS375 ASP376 PHE377 GLN378 LYS380 VAL382 ALA383 HIS384 PHE385 ILE386 HIS387 ARG388 GLY389 ILE390 GLU391 LEU391A THR392 VAL393 GLN394 ILE394A GLN394B ASP394C ASP395 THR396 GLY396A PRO396B ARG396C ALA397 THR398 LEU399 LYS399A GLU399B PHE399C LYS399D GLU400 LYS401 LEU402 ALA403 GLY404 ASP404A GLU404C LYS405 HIS406 GLN406A ARG407 ALA408 VAL409 ARG410 ALA411 LEU411A ARG412 GLN413 GLU414 VAL415 GLU415A SER415B PHE416 ALA417 ALA418 LEU418A PHE418B PRO418C LEU418D PRO418E GLY418F LEU418G PRO418H GLY418I PHE418J
Unit 4 SER-6 HIS-5 GLU-4 GLN-3 MET1 LEU2 ALA3 GLN4 PRO5 LEU6 LYS7 ASP10 SER11 ASP12 ALA13 GLU14 VAL15 TYR16 ASP17 ILE18 ILE19 LYS20 LYS21 GLU22 SER23 ASN24 ARG25 GLN26 ARG27 VAL28 GLY29 LEU30 GLU31 LEU32 ILE33 ALA34 SER35 GLU36 ASN37 PHE38 ALA39 SER40 ARG41 ALA42 VAL43 LEU44 GLU45 ALA46 LEU47 GLY48 SER49 CYS50 LEU51 ASN52 ASN53 LYS54 TYR55 SER56 GLU57 GLY58 TYR59 PRO60 GLY61 GLN62 ARG63 TYR64 TYR65 GLY66 GLY67 THR68 GLU69 HIS70 ILE71 ASP72 GLU73 LEU74 GLU75 THR76 LEU77 CYS78 GLN79 LYS80 ARG81 ALA82 LEU83 GLN84 ALA85 TYR86 GLY87 LEU88 ASP89 PRO89A GLN89B CYS89C TRP90 GLY91 VAL91A ASN92 VAL93 GLN94 PRO95 TYR96 SER97 GLY98 SER99 PRO100 ALA101 ASN102 PHE103 ALA104 VAL105 TYR106 THR107 ALA108 LEU109 VAL110 GLU111 PRO112 HIS112A GLY113 ARG115 ILE116 MET117 GLY118 LEU119 ASP120 LEU121 PRO122 ASP123 GLY124 GLY125 HIS126 LEU127 THR128 HIS129 GLY130 PHE131 MET132 THR133 ASP134 LYS134A LYS134B LYS134C ILE135 SER136 ALA137 THR138 SER138A ILE139 PHE140 PHE140A GLU141 SER142 MET143 ALA144 TYR145 LYS146 VAL147 ASN148 PRO149 ASP149A THR150 GLY151 TYR152 ILE153 ASP154 TYR155 ASP156 ARG157 LEU158 GLU159 GLU160 ASN161 ALA162 ARG163 LEU164 PHE165 HIS166 PRO167 LYS168 LEU169 ILE170 ILE171 ALA172 GLY173 THR174 SER175 CYS176 TYR177 SER178 ARG179 ASN180 LEU181 ASP182 TYR183 GLY184 ARG185 LEU186 ARG187 LYS188 ILE189 ALA190 ASP191 GLU192 ASN193 GLY194 ALA195 TYR196 LEU197 MET198 ALA199 ASP200 MET201 ALA202 HIS203 ILE204 SER205 GLY206 LEU207 VAL208 VAL209 ALA210 GLY211 VAL212 VAL213 PRO214 SER215 PRO216 PHE217 GLU218 HIS219 CYS220 HIS221 VAL222 VAL223 THR224 THR225 THR226 THR227 HIS228 LYS229 THR230 LEU231 ARG232 GLY233 CYS234 ARG235 ALA236 GLY237 MET238 ILE239 PHE240 TYR241 ARG242 ARG243 GLY244 VAL244A TYR249 ASN250 LEU250A GLU250B SER251 LEU252 ILE252A ASN253 SER254 ALA255 VAL256 PHE257 PRO258 GLY259 LEU260 GLN261 GLY262 GLY263 PRO264 HIS265 ASN266 HIS267 ALA268 ILE269 ALA270 GLY271 VAL272 ALA273 VAL274 ALA275 LEU276 LYS277 GLN278 ALA279 MET280 THR281 PRO282 GLU283 PHE284 LYS285 GLU286 TYR287 GLN288 ARG289 GLN290 VAL291 VAL292 ALA293 ASN294 CYS295 ARG296 ALA297 LEU298 SER299 ALA300 ALA301 LEU302 VAL303 GLU304 LEU305 GLY306 TYR307 LYS308 ILE309 VAL310 THR311 GLY312 GLY313 SER314 ASP315 ASN316 HIS317 LEU318 ILE319 LEU320 VAL321 ASP322 LEU323 ARG324 SER325 LYS326 GLY327 THR328 ASP329 GLY330 GLY331 ARG332 ALA333 GLU334 LYS335 VAL336 LEU337 GLU338 ALA339 CYS340 SER341 ILE342 ALA343 CYS344 ASN345 LYS346 ASN347 THR348 CYS349 PRO350 GLY351 ASP352 LYS354 SER355 ALA356 LEU357 ARG358 PRO359 SER360 GLY361 LEU362 ARG363 LEU364 GLY365 THR366 PRO367 ALA368 LEU369 THR370 SER371 ARG372 GLY373 LEU374 LEU374A GLU374B LYS375 ASP376 PHE377 GLN378 LYS380 VAL382 ALA383 HIS384 PHE385 ILE386 HIS387 ARG388 GLY389 ILE390 GLU391 LEU391A THR392 VAL393 GLN394 ILE394A GLN394B ASP394C ASP395 THR396 GLY396A PRO396B ARG396C ALA397 THR398 LEU399 LYS399A GLU399B PHE399C LYS399D GLU400 LYS401 LEU402 ALA403 GLY404 ASP404A GLU404C LYS405 HIS406 GLN406A ARG407 ALA408 VAL409 ARG410 ALA411 LEU411A ARG412 GLN413 GLU414 VAL415 GLU415A SER415B PHE416 ALA417 ALA418 LEU418A PHE418B PRO418C LEU418D PRO418E GLY418F LEU418G PRO418H GLY418I PHE418J
Unit 5 PLP419A GLY420B
Unit 7 GLY420B
Ligands
Unit 6 PLP419A
Unit 8 TGF420C GOL421 GOL422
Unit 9 PLP419A GOL421
Unit 10 PLP419A TGF420F GOL421
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany