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Sequence, Chains, Asymmetric and Biological Units

Title FORMATE DEHYDROGENASE N FROM E. COLI
Keywords OXIDOREDUCTASE, SELENIUM, SELENOCYSTEINE, SECYS, MOLYBDENUM, MOLYBDOPTERIN, MPT, MOLYBDOPTERIN GUANINE DINUCLEOTIDE, MGD SULFUR CLUSTER, FE4S4, FORMATE, DEHYDROGENASE, ANAEROBIC, I MEMBRANE PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1KQF     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 982 7719 0
2  Protein   FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, IRON-SU SUBUNIT  B 289 2207 0
3  Protein   FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, CYTOCHR B556(FDN) SUBUNIT  C 216 1783 0
4  Ligand    A 4 0 103
5  Ligand   FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, IRON-SU SUBUNIT  B 4 0 32
6  Ligand   FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, CYTOCHR B556(FDN) SUBUNIT  C 3 0 156
7 Water     1989 0 1989
total       3487 11709 2280

Proteins
Unit 1 GLN34 ALA35 ARG36 ASN37 TYR38 LYS39 LEU40 LEU41 ARG42 ALA43 LYS44 GLU45 ILE46 ARG47 ASN48 THR49 CYS50 THR51 TYR52 CYS53 SER54 VAL55 GLY56 CYS57 GLY58 LEU59 LEU60 MET61 TYR62 SER63 LEU64 GLY65 ASP66 GLY67 ALA68 LYS69 ASN70 ALA71 ARG72 GLU73 ALA74 ILE75 TYR76 HIS77 ILE78 GLU79 GLY80 ASP81 PRO82 ASP83 HIS84 PRO85 VAL86 SER87 ARG88 GLY89 ALA90 LEU91 CYS92 PRO93 LYS94 GLY95 ALA96 GLY97 LEU98 LEU99 ASP100 TYR101 VAL102 ASN103 SER104 GLU105 ASN106 ARG107 LEU108 ARG109 TYR110 PRO111 GLU112 TYR113 ARG114 ALA115 PRO116 GLY117 SER118 ASP119 LYS120 TRP121 GLN122 ARG123 ILE124 SER125 TRP126 GLU127 GLU128 ALA129 PHE130 SER131 ARG132 ILE133 ALA134 LYS135 LEU136 MET137 LYS138 ALA139 ASP140 ARG141 ASP142 ALA143 ASN144 PHE145 ILE146 GLU147 LYS148 ASN149 GLU150 GLN151 GLY152 VAL153 THR154 VAL155 ASN156 ARG157 TRP158 LEU159 SER160 THR161 GLY162 MET163 LEU164 CYS165 ALA166 SER167 GLY168 ALA169 SER170 ASN171 GLU172 THR173 GLY174 MET175 LEU176 THR177 GLN178 LYS179 PHE180 ALA181 ARG182 SER183 LEU184 GLY185 MET186 LEU187 ALA188 VAL189 ASP190 ASN191 GLN192 ALA193 ARG194 VAL195 SEC196 HIS197 GLY198 PRO199 THR200 VAL201 ALA202 SER203 LEU204 ALA205 PRO206 THR207 PHE208 GLY209 ARG210 GLY211 ALA212 MET213 THR214 ASN215 HIS216 TRP217 VAL218 ASP219 ILE220 LYS221 ASN222 ALA223 ASN224 VAL225 VAL226 MET227 VAL228 MET229 GLY230 GLY231 ASN232 ALA233 ALA234 GLU235 ALA236 HIS237 PRO238 VAL239 GLY240 PHE241 ARG242 TRP243 ALA244 MET245 GLU246 ALA247 LYS248 ASN249 ASN250 ASN251 ASP252 ALA253 THR254 LEU255 ILE256 VAL257 VAL258 ASP259 PRO260 ARG261 PHE262 THR263 ARG264 THR265 ALA266 SER267 VAL268 ALA269 ASP270 ILE271 TYR272 ALA273 PRO274 ILE275 ARG276 SER277 GLY278 THR279 ASP280 ILE281 THR282 PHE283 LEU284 SER285 GLY286 VAL287 LEU288 ARG289 TYR290 LEU291 ILE292 GLU293 ASN294 ASN295 LYS296 ILE297 ASN298 ALA299 GLU300 TYR301 VAL302 LYS303 HIS304 TYR305 THR306 ASN307 ALA308 SER309 LEU310 LEU311 VAL312 ARG313 ASP314 ASP315 PHE316 ALA317 PHE318 GLU319 ASP320 GLY321 LEU322 PHE323 SER324 GLY325 TYR326 ASP327 ALA328 GLU329 LYS330 ARG331 GLN332 TYR333 ASP334 LYS335 SER336 SER337 TRP338 ASN339 TYR340 GLN341 LEU342 ASP343 GLU344 ASN345 GLY346 TYR347 ALA348 LYS349 ARG350 ASP351 GLU352 THR353 LEU354 THR355 HIS356 PRO357 ARG358 CYS359 VAL360 TRP361 ASN362 LEU363 LEU364 LYS365 GLU366 HIS367 VAL368 SER369 ARG370 TYR371 THR372 PRO373 ASP374 VAL375 VAL376 GLU377 ASN378 ILE379 CYS380 GLY381 THR382 PRO383 LYS384 ALA385 ASP386 PHE387 LEU388 LYS389 VAL390 CYS391 GLU392 VAL393 LEU394 ALA395 SER396 THR397 SER398 ALA399 PRO400 ASP401 ARG402 THR403 THR404 THR405 PHE406 LEU407 TYR408 ALA409 LEU410 GLY411 TRP412 THR413 GLN414 HIS415 THR416 VAL417 GLY418 ALA419 GLN420 ASN421 ILE422 ARG423 THR424 MET425 ALA426 MET427 ILE428 GLN429 LEU430 LEU431 LEU432 GLY433 ASN434 MET435 GLY436 MET437 ALA438 GLY439 GLY440 GLY441 VAL442 ASN443 ALA444 LEU445 ARG446 GLY447 HIS448 SER449 ASN450 ILE451 GLN452 GLY453 LEU454 THR455 ASP456 LEU457 GLY458 LEU459 LEU460 SER461 THR462 SER463 LEU464 PRO465 GLY466 TYR467 LEU468 THR469 LEU470 PRO471 SER472 GLU473 LYS474 GLN475 VAL476 ASP477 LEU478 GLN479 SER480 TYR481 LEU482 GLU483 ALA484 ASN485 THR486 PRO487 LYS488 ALA489 THR490 LEU491 ALA492 ASP493 GLN494 VAL495 ASN496 TYR497 TRP498 SER499 ASN500 TYR501 PRO502 LYS503 PHE504 PHE505 VAL506 SER507 LEU508 MET509 LYS510 SER511 PHE512 TYR513 GLY514 ASP515 ALA516 ALA517 GLN518 LYS519 GLU520 ASN521 ASN522 TRP523 GLY524 TYR525 ASP526 TRP527 LEU528 PRO529 LYS530 TRP531 ASP532 GLN533 THR534 TYR535 ASP536 VAL537 ILE538 LYS539 TYR540 PHE541 ASN542 MET543 MET544 ASP545 GLU546 GLY547 LYS548 VAL549 THR550 GLY551 TYR552 PHE553 CYS554 GLN555 GLY556 PHE557 ASN558 PRO559 VAL560 ALA561 SER562 PHE563 PRO564 ASP565 LYS566 ASN567 LYS568 VAL569 VAL570 SER571 CYS572 LEU573 SER574 LYS575 LEU576 LYS577 TYR578 MET579 VAL580 VAL581 ILE582 ASP583 PRO584 LEU585 VAL586 THR587 GLU588 THR589 SER590 THR591 PHE592 TRP593 GLN594 ASN595 HIS596 GLY597 GLU598 SER599 ASN600 ASP601 VAL602 ASP603 PRO604 ALA605 SER606 ILE607 GLN608 THR609 GLU610 VAL611 PHE612 ARG613 LEU614 PRO615 SER616 THR617 CYS618 PHE619 ALA620 GLU621 GLU622 ASP623 GLY624 SER625 ILE626 ALA627 ASN628 SER629 GLY630 ARG631 TRP632 LEU633 GLN634 TRP635 HIS636 TRP637 LYS638 GLY639 GLN640 ASP641 ALA642 PRO643 GLY644 GLU645 ALA646 ARG647 ASN648 ASP649 GLY650 GLU651 ILE652 LEU653 ALA654 GLY655 ILE656 TYR657 HIS658 HIS659 LEU660 ARG661 GLU662 LEU663 TYR664 GLN665 SER666 GLU667 GLY668 GLY669 LYS670 GLY671 VAL672 GLU673 PRO674 LEU675 MET676 LYS677 MET678 SER679 TRP680 ASN681 TYR682 LYS683 GLN684 PRO685 HIS686 GLU687 PRO688 GLN689 SER690 ASP691 GLU692 VAL693 ALA694 LYS695 GLU696 ASN697 ASN698 GLY699 TYR700 ALA701 LEU702 GLU703 ASP704 LEU705 TYR706 ASP707 ALA708 ASN709 GLY710 VAL711 LEU712 ILE713 ALA714 LYS715 LYS716 GLY717 GLN718 LEU719 LEU720 SER721 SER722 PHE723 ALA724 HIS725 LEU726 ARG727 ASP728 ASP729 GLY730 THR731 THR732 ALA733 SER734 SER735 CYS736 TRP737 ILE738 TYR739 THR740 GLY741 SER742 TRP743 THR744 GLU745 GLN746 GLY747 ASN748 GLN749 MET750 ALA751 ASN752 ARG753 ASP754 ASN755 SER756 ASP757 PRO758 SER759 GLY760 LEU761 GLY762 ASN763 THR764 LEU765 GLY766 TRP767 ALA768 TRP769 ALA770 TRP771 PRO772 LEU773 ASN774 ARG775 ARG776 VAL777 LEU778 TYR779 ASN780 ARG781 ALA782 SER783 ALA784 ASP785 ILE786 ASN787 GLY788 LYS789 PRO790 TRP791 ASP792 PRO793 LYS794 ARG795 MET796 LEU797 ILE798 GLN799 TRP800 ASN801 GLY802 SER803 LYS804 TRP805 THR806 GLY807 ASN808 ASP809 ILE810 PRO811 ASP812 PHE813 GLY814 ASN815 ALA816 ALA817 PRO818 GLY819 THR820 PRO821 THR822 GLY823 PRO824 PHE825 ILE826 MET827 GLN828 PRO829 GLU830 GLY831 MET832 GLY833 ARG834 LEU835 PHE836 ALA837 ILE838 ASN839 LYS840 MET841 ALA842 GLU843 GLY844 PRO845 PHE846 PRO847 GLU848 HIS849 TYR850 GLU851 PRO852 ILE853 GLU854 THR855 PRO856 LEU857 GLY858 THR859 ASN860 PRO861 LEU862 HIS863 PRO864 ASN865 VAL866 VAL867 SER868 ASN869 PRO870 VAL871 VAL872 ARG873 LEU874 TYR875 GLU876 GLN877 ASP878 ALA879 LEU880 ARG881 MET882 GLY883 LYS884 LYS885 GLU886 GLN887 PHE888 PRO889 TYR890 VAL891 GLY892 THR893 THR894 TYR895 ARG896 LEU897 THR898 GLU899 HIS900 PHE901 HIS902 THR903 TRP904 THR905 LYS906 HIS907 ALA908 LEU909 LEU910 ASN911 ALA912 ILE913 ALA914 GLN915 PRO916 GLU917 GLN918 PHE919 VAL920 GLU921 ILE922 SER923 GLU924 THR925 LEU926 ALA927 ALA928 ALA929 LYS930 GLY931 ILE932 ASN933 ASN934 GLY935 ASP936 ARG937 VAL938 THR939 VAL940 SER941 SER942 LYS943 ARG944 GLY945 PHE946 ILE947 ARG948 ALA949 VAL950 ALA951 VAL952 VAL953 THR954 ARG955 ARG956 LEU957 LYS958 PRO959 LEU960 ASN961 VAL962 ASN963 GLY964 GLN965 GLN966 VAL967 GLU968 THR969 VAL970 GLY971 ILE972 PRO973 ILE974 HIS975 TRP976 GLY977 PHE978 GLU979 GLY980 VAL981 ALA982 ARG983 LYS984 GLY985 TYR986 ILE987 ALA988 ASN989 THR990 LEU991 THR992 PRO993 ASN994 VAL995 GLY996 ASP997 ALA998 ASN999 SER1000 GLN1001 THR1002 PRO1003 GLU1004 TYR1005 LYS1006 ALA1007 PHE1008 LEU1009 VAL1010 ASN1011 ILE1012 GLU1013 LYS1014 ALA1015
Unit 2 ALA2 MET3 GLU4 THR5 GLN6 ASP7 ILE8 ILE9 LYS10 ARG11 SER12 ALA13 THR14 ASN15 SER16 ILE17 THR18 PRO19 PRO20 SER21 GLN22 VAL23 ARG24 ASP25 TYR26 LYS27 ALA28 GLU29 VAL30 ALA31 LYS32 LEU33 ILE34 ASP35 VAL36 SER37 THR38 CYS39 ILE40 GLY41 CYS42 LYS43 ALA44 CYS45 GLN46 VAL47 ALA48 CYS49 SER50 GLU51 TRP52 ASN53 ASP54 ILE55 ARG56 ASP57 GLU58 VAL59 GLY60 HIS61 CYS62 VAL63 GLY64 VAL65 TYR66 ASP67 ASN68 PRO69 ALA70 ASP71 LEU72 SER73 ALA74 LYS75 SER76 TRP77 THR78 VAL79 MET80 ARG81 PHE82 SER83 GLU84 THR85 GLU86 GLN87 ASN88 GLY89 LYS90 LEU91 GLU92 TRP93 LEU94 ILE95 ARG96 LYS97 ASP98 GLY99 CYS100 MET101 HIS102 CYS103 GLU104 ASP105 PRO106 GLY107 CYS108 LEU109 LYS110 ALA111 CYS112 PRO113 SER114 ALA115 GLY116 ALA117 ILE118 ILE119 GLN120 TYR121 ALA122 ASN123 GLY124 ILE125 VAL126 ASP127 PHE128 GLN129 SER130 GLU131 ASN132 CYS133 ILE134 GLY135 CYS136 GLY137 TYR138 CYS139 ILE140 ALA141 GLY142 CYS143 PRO144 PHE145 ASN146 ILE147 PRO148 ARG149 LEU150 ASN151 LYS152 GLU153 ASP154 ASN155 ARG156 VAL157 TYR158 LYS159 CYS160 THR161 LEU162 CYS163 VAL164 ASP165 ARG166 VAL167 SER168 VAL169 GLY170 GLN171 GLU172 PRO173 ALA174 CYS175 VAL176 LYS177 THR178 CYS179 PRO180 THR181 GLY182 ALA183 ILE184 HIS185 PHE186 GLY187 THR188 LYS189 LYS190 GLU191 MET192 LEU193 GLU194 LEU195 ALA196 GLU197 GLN198 ARG199 VAL200 ALA201 LYS202 LEU203 LYS204 ALA205 ARG206 GLY207 TYR208 GLU209 HIS210 ALA211 GLY212 VAL213 TYR214 ASN215 PRO216 GLU217 GLY218 VAL219 GLY220 GLY221 THR222 HIS223 VAL224 MET225 TYR226 VAL227 LEU228 HIS229 HIS230 ALA231 ASP232 GLN233 PRO234 GLU235 LEU236 TYR237 HIS238 GLY239 LEU240 PRO241 LYS242 ASP243 PRO244 LYS245 ILE246 ASP247 THR248 SER249 VAL250 SER251 LEU252 TRP253 LYS254 GLY255 ALA256 LEU257 LYS258 PRO259 LEU260 ALA261 ALA262 ALA263 GLY264 PHE265 ILE266 ALA267 THR268 PHE269 ALA270 GLY271 LEU272 ILE273 PHE274 HIS275 TYR276 ILE277 GLY278 ILE279 GLY280 PRO281 ASN282 LYS283 GLU284 VAL285 ASP286 ASP287 ASP288 GLU289 GLU290
Unit 3 SER2 LYS3 SER4 LYS5 MET6 ILE7 VAL8 ARG9 THR10 LYS11 PHE12 ILE13 ASP14 ARG15 ALA16 CYS17 HIS18 TRP19 THR20 VAL21 VAL22 ILE23 CYS24 PHE25 PHE26 LEU27 VAL28 ALA29 LEU30 SER31 GLY32 ILE33 SER34 PHE35 PHE36 PHE37 PRO38 THR39 LEU40 GLN41 TRP42 LEU43 THR44 GLN45 THR46 PHE47 GLY48 THR49 PRO50 GLN51 MET52 GLY53 ARG54 ILE55 LEU56 HIS57 PRO58 PHE59 PHE60 GLY61 ILE62 ALA63 ILE64 PHE65 VAL66 ALA67 LEU68 MET69 PHE70 MET71 PHE72 VAL73 ARG74 PHE75 VAL76 HIS77 HIS78 ASN79 ILE80 PRO81 ASP82 LYS83 LYS84 ASP85 ILE86 PRO87 TRP88 LEU89 LEU90 ASN91 ILE92 VAL93 GLU94 VAL95 LEU96 LYS97 GLY98 ASN99 GLU100 HIS101 LYS102 VAL103 ALA104 ASP105 VAL106 GLY107 LYS108 TYR109 ASN110 ALA111 GLY112 GLN113 LYS114 MET115 MET116 PHE117 TRP118 SER119 ILE120 MET121 SER122 MET123 ILE124 PHE125 VAL126 LEU127 LEU128 VAL129 THR130 GLY131 VAL132 ILE133 ILE134 TRP135 ARG136 PRO137 TYR138 PHE139 ALA140 GLN141 TYR142 PHE143 PRO144 MET145 GLN146 VAL147 VAL148 ARG149 TYR150 SER151 LEU152 LEU153 ILE154 HIS155 ALA156 ALA157 ALA158 GLY159 ILE160 ILE161 LEU162 ILE163 HIS164 ALA165 ILE166 LEU167 ILE168 HIS169 MET170 TYR171 MET172 ALA173 PHE174 TRP175 VAL176 LYS177 GLY178 SER179 ILE180 LYS181 GLY182 MET183 ILE184 GLU185 GLY186 LYS187 VAL188 SER189 ARG190 ARG191 TRP192 ALA193 LYS194 LYS195 HIS196 HIS197 PRO198 ARG199 TRP200 TYR201 ARG202 GLU203 ILE204 GLU205 LYS206 ALA207 GLU208 ALA209 LYS210 LYS211 GLU212 SER213 GLU214 GLU215 GLY216 ILE217

Ligands
Unit 4 6MO1016 SF41017 MGD1018 MGD1019
Unit 5 SF4805 SF4806 SF4807 SF4808
Unit 6 HEM809 HEM810 CDL812

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany