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Sequence, Chains, Asymmetric and Biological Units

Title RNA APTAMER COMPLEXED WITH CITRULLINE, NMR
Keywords IN VITRO SELECTED RNA, RNA APTAMER
Experiment NMR
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1KOD     released     available     available     Quaternary Structure Server  
NDB   1KOD                         
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 11 243 0
2  RNA    B 14 299 0
3  Ligand   RNA (5'- R(P*AP*CP*GP*GP*UP*UP*AP*GP*GP*UP*CP*GP*CP*U)-3')  B 1 0 12
total       26 542 12
Nucleic acids
Unit 1 A5 G6 A7 A8 G9 G10 A11 G12 U13 G14 U15
Unit 2 A27 C28 G29 G30 U31 U32 A33 G34 G35 U36 C37 G38 C39 U40
Ligands
Unit 3 CIR1
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany