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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE HUMAN PPAR-ALPHA LIGAND-BINDING DOM COMPLEX WITH AN ANTAGONIST GW6471 AND A SMRT COREPRESSOR MO
Keywords NUCLEAR COREPRESSOR NUCLEAR HORMONE RECEPTORS ANTAGONIST, TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1KKQ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR  A 269 2128 0
2  Protein   PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR  B 269 2128 0
3  Protein   PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR  C 269 2128 0
4  Protein   PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR  D 269 2128 0
5  Protein   NUCLEAR RECEPTOR CO-REPRESSOR 2  E 19 145 0
6  Protein   NUCLEAR RECEPTOR CO-REPRESSOR 2  F 19 149 0
7  Protein   NUCLEAR RECEPTOR CO-REPRESSOR 2  G 19 145 0
8  Protein   NUCLEAR RECEPTOR CO-REPRESSOR 2  H 19 145 0
9  Ligand   PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR  A 1 0 45
10  Ligand   PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR  B 1 0 45
11  Ligand   PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR  C 1 0 45
12  Ligand   PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR  D 1 0 45
13 Water     330 0 330
total       1486 9096 510
Proteins
Unit 1 THR200 ALA201 ASP202 LEU203 LYS204 SER205 LEU206 ALA207 LYS208 ARG209 ILE210 TYR211 GLU212 ALA213 TYR214 LEU215 LYS216 ASN217 PHE218 ASN219 MET220 ASN221 LYS222 VAL223 LYS224 ALA225 ARG226 VAL227 ILE228 LEU229 SER230 GLY231 LYS232 ALA233 SER234 ASN235 ASN236 PRO237 PRO238 PHE239 VAL240 ILE241 HIS242 ASP243 MET244 GLU245 THR246 LEU247 CYS248 MET249 ALA250 GLU251 LYS252 THR253 LEU254 VAL255 ALA256 LYS257 LEU258 VAL259 ALA260 ASN261 GLY262 ILE263 GLN264 ASN265 LYS266 GLU267 ALA268 GLU269 VAL270 ARG271 ILE272 PHE273 HIS274 CYS275 CYS276 GLN277 CYS278 THR279 SER280 VAL281 GLU282 THR283 VAL284 THR285 GLU286 LEU287 THR288 GLU289 PHE290 ALA291 LYS292 ALA293 ILE294 PRO295 GLY296 PHE297 ALA298 ASN299 LEU300 ASP301 LEU302 ASN303 ASP304 GLN305 VAL306 THR307 LEU308 LEU309 LYS310 TYR311 GLY312 VAL313 TYR314 GLU315 ALA316 ILE317 PHE318 ALA319 MET320 LEU321 SER322 SER323 VAL324 MET325 ASN326 LYS327 ASP328 GLY329 MET330 LEU331 VAL332 ALA333 TYR334 GLY335 ASN336 GLY337 PHE338 ILE339 THR340 ARG341 GLU342 PHE343 LEU344 LYS345 SER346 LEU347 ARG348 LYS349 PRO350 PHE351 CYS352 ASP353 ILE354 MET355 GLU356 PRO357 LYS358 PHE359 ASP360 PHE361 ALA362 MET363 LYS364 PHE365 ASN366 ALA367 LEU368 GLU369 LEU370 ASP371 ASP372 SER373 ASP374 ILE375 SER376 LEU377 PHE378 VAL379 ALA380 ALA381 ILE382 ILE383 CYS384 CYS385 GLY386 ASP387 ARG388 PRO389 GLY390 LEU391 LEU392 ASN393 VAL394 GLY395 HIS396 ILE397 GLU398 LYS399 MET400 GLN401 GLU402 GLY403 ILE404 VAL405 HIS406 VAL407 LEU408 ARG409 LEU410 HIS411 LEU412 GLN413 SER414 ASN415 HIS416 PRO417 ASP418 ASP419 ILE420 PHE421 LEU422 PHE423 PRO424 LYS425 LEU426 LEU427 GLN428 LYS429 MET430 ALA431 ASP432 LEU433 ARG434 GLN435 LEU436 VAL437 THR438 GLU439 HIS440 ALA441 GLN442 LEU443 VAL444 GLN445 ILE446 ILE447 LYS448 LYS449 THR450 GLU451 SER452 ASP453 ALA454 ALA455 LEU456 HIS457 PRO458 LEU459 LEU460 GLN461 GLU462 ILE463 TYR464 ARG465 ASP466 MET467 TYR468
Unit 2 THR200 ALA201 ASP202 LEU203 LYS204 SER205 LEU206 ALA207 LYS208 ARG209 ILE210 TYR211 GLU212 ALA213 TYR214 LEU215 LYS216 ASN217 PHE218 ASN219 MET220 ASN221 LYS222 VAL223 LYS224 ALA225 ARG226 VAL227 ILE228 LEU229 SER230 GLY231 LYS232 ALA233 SER234 ASN235 ASN236 PRO237 PRO238 PHE239 VAL240 ILE241 HIS242 ASP243 MET244 GLU245 THR246 LEU247 CYS248 MET249 ALA250 GLU251 LYS252 THR253 LEU254 VAL255 ALA256 LYS257 LEU258 VAL259 ALA260 ASN261 GLY262 ILE263 GLN264 ASN265 LYS266 GLU267 ALA268 GLU269 VAL270 ARG271 ILE272 PHE273 HIS274 CYS275 CYS276 GLN277 CYS278 THR279 SER280 VAL281 GLU282 THR283 VAL284 THR285 GLU286 LEU287 THR288 GLU289 PHE290 ALA291 LYS292 ALA293 ILE294 PRO295 GLY296 PHE297 ALA298 ASN299 LEU300 ASP301 LEU302 ASN303 ASP304 GLN305 VAL306 THR307 LEU308 LEU309 LYS310 TYR311 GLY312 VAL313 TYR314 GLU315 ALA316 ILE317 PHE318 ALA319 MET320 LEU321 SER322 SER323 VAL324 MET325 ASN326 LYS327 ASP328 GLY329 MET330 LEU331 VAL332 ALA333 TYR334 GLY335 ASN336 GLY337 PHE338 ILE339 THR340 ARG341 GLU342 PHE343 LEU344 LYS345 SER346 LEU347 ARG348 LYS349 PRO350 PHE351 CYS352 ASP353 ILE354 MET355 GLU356 PRO357 LYS358 PHE359 ASP360 PHE361 ALA362 MET363 LYS364 PHE365 ASN366 ALA367 LEU368 GLU369 LEU370 ASP371 ASP372 SER373 ASP374 ILE375 SER376 LEU377 PHE378 VAL379 ALA380 ALA381 ILE382 ILE383 CYS384 CYS385 GLY386 ASP387 ARG388 PRO389 GLY390 LEU391 LEU392 ASN393 VAL394 GLY395 HIS396 ILE397 GLU398 LYS399 MET400 GLN401 GLU402 GLY403 ILE404 VAL405 HIS406 VAL407 LEU408 ARG409 LEU410 HIS411 LEU412 GLN413 SER414 ASN415 HIS416 PRO417 ASP418 ASP419 ILE420 PHE421 LEU422 PHE423 PRO424 LYS425 LEU426 LEU427 GLN428 LYS429 MET430 ALA431 ASP432 LEU433 ARG434 GLN435 LEU436 VAL437 THR438 GLU439 HIS440 ALA441 GLN442 LEU443 VAL444 GLN445 ILE446 ILE447 LYS448 LYS449 THR450 GLU451 SER452 ASP453 ALA454 ALA455 LEU456 HIS457 PRO458 LEU459 LEU460 GLN461 GLU462 ILE463 TYR464 ARG465 ASP466 MET467 TYR468
Unit 3 THR200 ALA201 ASP202 LEU203 LYS204 SER205 LEU206 ALA207 LYS208 ARG209 ILE210 TYR211 GLU212 ALA213 TYR214 LEU215 LYS216 ASN217 PHE218 ASN219 MET220 ASN221 LYS222 VAL223 LYS224 ALA225 ARG226 VAL227 ILE228 LEU229 SER230 GLY231 LYS232 ALA233 SER234 ASN235 ASN236 PRO237 PRO238 PHE239 VAL240 ILE241 HIS242 ASP243 MET244 GLU245 THR246 LEU247 CYS248 MET249 ALA250 GLU251 LYS252 THR253 LEU254 VAL255 ALA256 LYS257 LEU258 VAL259 ALA260 ASN261 GLY262 ILE263 GLN264 ASN265 LYS266 GLU267 ALA268 GLU269 VAL270 ARG271 ILE272 PHE273 HIS274 CYS275 CYS276 GLN277 CYS278 THR279 SER280 VAL281 GLU282 THR283 VAL284 THR285 GLU286 LEU287 THR288 GLU289 PHE290 ALA291 LYS292 ALA293 ILE294 PRO295 GLY296 PHE297 ALA298 ASN299 LEU300 ASP301 LEU302 ASN303 ASP304 GLN305 VAL306 THR307 LEU308 LEU309 LYS310 TYR311 GLY312 VAL313 TYR314 GLU315 ALA316 ILE317 PHE318 ALA319 MET320 LEU321 SER322 SER323 VAL324 MET325 ASN326 LYS327 ASP328 GLY329 MET330 LEU331 VAL332 ALA333 TYR334 GLY335 ASN336 GLY337 PHE338 ILE339 THR340 ARG341 GLU342 PHE343 LEU344 LYS345 SER346 LEU347 ARG348 LYS349 PRO350 PHE351 CYS352 ASP353 ILE354 MET355 GLU356 PRO357 LYS358 PHE359 ASP360 PHE361 ALA362 MET363 LYS364 PHE365 ASN366 ALA367 LEU368 GLU369 LEU370 ASP371 ASP372 SER373 ASP374 ILE375 SER376 LEU377 PHE378 VAL379 ALA380 ALA381 ILE382 ILE383 CYS384 CYS385 GLY386 ASP387 ARG388 PRO389 GLY390 LEU391 LEU392 ASN393 VAL394 GLY395 HIS396 ILE397 GLU398 LYS399 MET400 GLN401 GLU402 GLY403 ILE404 VAL405 HIS406 VAL407 LEU408 ARG409 LEU410 HIS411 LEU412 GLN413 SER414 ASN415 HIS416 PRO417 ASP418 ASP419 ILE420 PHE421 LEU422 PHE423 PRO424 LYS425 LEU426 LEU427 GLN428 LYS429 MET430 ALA431 ASP432 LEU433 ARG434 GLN435 LEU436 VAL437 THR438 GLU439 HIS440 ALA441 GLN442 LEU443 VAL444 GLN445 ILE446 ILE447 LYS448 LYS449 THR450 GLU451 SER452 ASP453 ALA454 ALA455 LEU456 HIS457 PRO458 LEU459 LEU460 GLN461 GLU462 ILE463 TYR464 ARG465 ASP466 MET467 TYR468
Unit 4 THR200 ALA201 ASP202 LEU203 LYS204 SER205 LEU206 ALA207 LYS208 ARG209 ILE210 TYR211 GLU212 ALA213 TYR214 LEU215 LYS216 ASN217 PHE218 ASN219 MET220 ASN221 LYS222 VAL223 LYS224 ALA225 ARG226 VAL227 ILE228 LEU229 SER230 GLY231 LYS232 ALA233 SER234 ASN235 ASN236 PRO237 PRO238 PHE239 VAL240 ILE241 HIS242 ASP243 MET244 GLU245 THR246 LEU247 CYS248 MET249 ALA250 GLU251 LYS252 THR253 LEU254 VAL255 ALA256 LYS257 LEU258 VAL259 ALA260 ASN261 GLY262 ILE263 GLN264 ASN265 LYS266 GLU267 ALA268 GLU269 VAL270 ARG271 ILE272 PHE273 HIS274 CYS275 CYS276 GLN277 CYS278 THR279 SER280 VAL281 GLU282 THR283 VAL284 THR285 GLU286 LEU287 THR288 GLU289 PHE290 ALA291 LYS292 ALA293 ILE294 PRO295 GLY296 PHE297 ALA298 ASN299 LEU300 ASP301 LEU302 ASN303 ASP304 GLN305 VAL306 THR307 LEU308 LEU309 LYS310 TYR311 GLY312 VAL313 TYR314 GLU315 ALA316 ILE317 PHE318 ALA319 MET320 LEU321 SER322 SER323 VAL324 MET325 ASN326 LYS327 ASP328 GLY329 MET330 LEU331 VAL332 ALA333 TYR334 GLY335 ASN336 GLY337 PHE338 ILE339 THR340 ARG341 GLU342 PHE343 LEU344 LYS345 SER346 LEU347 ARG348 LYS349 PRO350 PHE351 CYS352 ASP353 ILE354 MET355 GLU356 PRO357 LYS358 PHE359 ASP360 PHE361 ALA362 MET363 LYS364 PHE365 ASN366 ALA367 LEU368 GLU369 LEU370 ASP371 ASP372 SER373 ASP374 ILE375 SER376 LEU377 PHE378 VAL379 ALA380 ALA381 ILE382 ILE383 CYS384 CYS385 GLY386 ASP387 ARG388 PRO389 GLY390 LEU391 LEU392 ASN393 VAL394 GLY395 HIS396 ILE397 GLU398 LYS399 MET400 GLN401 GLU402 GLY403 ILE404 VAL405 HIS406 VAL407 LEU408 ARG409 LEU410 HIS411 LEU412 GLN413 SER414 ASN415 HIS416 PRO417 ASP418 ASP419 ILE420 PHE421 LEU422 PHE423 PRO424 LYS425 LEU426 LEU427 GLN428 LYS429 MET430 ALA431 ASP432 LEU433 ARG434 GLN435 LEU436 VAL437 THR438 GLU439 HIS440 ALA441 GLN442 LEU443 VAL444 GLN445 ILE446 ILE447 LYS448 LYS449 THR450 GLU451 SER452 ASP453 ALA454 ALA455 LEU456 HIS457 PRO458 LEU459 LEU460 GLN461 GLU462 ILE463 TYR464 ARG465 ASP466 MET467 TYR468
Unit 5 ASN682 MET683 GLY684 LEU685 GLU686 ALA687 ILE688 ILE689 ARG690 LYS691 ALA692 LEU693 MET694 GLY695 LYS696 TYR697 ASP698 GLN699 TRP700
Unit 6 ASN682 MET683 GLY684 LEU685 GLU686 ALA687 ILE688 ILE689 ARG690 LYS691 ALA692 LEU693 MET694 GLY695 LYS696 TYR697 ASP698 GLN699 TRP700
Unit 7 ASN682 MET683 GLY684 LEU685 GLU686 ALA687 ILE688 ILE689 ARG690 LYS691 ALA692 LEU693 MET694 GLY695 LYS696 TYR697 ASP698 GLN699 TRP700
Unit 8 ASN682 MET683 GLY684 LEU685 GLU686 ALA687 ILE688 ILE689 ARG690 LYS691 ALA692 LEU693 MET694 GLY695 LYS696 TYR697 ASP698 GLN699 TRP700
Ligands
Unit 9 471775
Unit 10 471776
Unit 11 471777
Unit 12 471778
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany