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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF DTDP-D-GLUCOSE 4,6-DEHYDRATASE (RML STREPTOCOCCUS SUIS WITH DTDP-XYLOSE BOUND
Keywords ROSSMANN FOLD, LYASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1KEP     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  A 346 2741 0
2  Protein   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  B 346 2737 0
3  Ligand   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  A 4 0 66
4  Ligand   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  B 3 0 83
5 Water     804 0 804
total       1503 5478 953
Proteins
Unit 1 GLN3 PHE4 LYS5 ASN6 ILE7 ILE8 VAL9 THR10 GLY11 GLY12 ALA13 GLY14 PHE15 ILE16 GLY17 SER18 ASN19 PHE20 VAL21 HIS22 TYR23 VAL24 TYR25 ASN26 ASN27 HIS28 PRO29 ASP30 VAL31 HIS32 VAL33 THR34 VAL35 LEU36 ASP37 LYS38 LEU39 THR40 TYR41 ALA42 GLY43 ASN44 LYS45 ALA46 ASN47 LEU48 GLU49 ALA50 ILE51 LEU52 GLY53 ASP54 ARG55 VAL56 GLU57 LEU58 VAL59 VAL60 GLY61 ASP62 ILE63 ALA64 ASP65 ALA66 GLU67 LEU68 VAL69 ASP70 LYS71 LEU72 ALA73 ALA74 LYS75 ALA76 ASP77 ALA78 ILE79 VAL80 HIS81 TYR82 ALA83 ALA84 GLU85 SER86 HIS87 ASN88 ASP89 ASN90 SER91 LEU92 ASN93 ASP94 PRO95 SER96 PRO97 PHE98 ILE99 HIS100 THR101 ASN102 PHE103 ILE104 GLY105 THR106 TYR107 THR108 LEU109 LEU110 GLU111 ALA112 ALA113 ARG114 LYS115 TYR116 ASP117 ILE118 ARG119 PHE120 HIS121 HIS122 VAL123 SER124 THR125 ASP126 GLU127 VAL128 TYR129 GLY130 ASP131 LEU132 PRO133 LEU134 ARG135 GLU136 ASP137 LEU138 PRO139 GLY140 HIS141 GLY142 GLU143 GLY144 PRO145 GLY146 GLU147 LYS148 PHE149 THR150 ALA151 GLU152 THR153 ASN154 TYR155 ASN156 PRO157 SER158 SER159 PRO160 TYR161 SER162 SER163 THR164 LYS165 ALA166 ALA167 SER168 ASP169 LEU170 ILE171 VAL172 LYS173 ALA174 TRP175 VAL176 ARG177 SER178 PHE179 GLY180 VAL181 LYS182 ALA183 THR184 ILE185 SER186 ASN187 CYS188 SER189 ASN190 ASN191 TYR192 GLY193 PRO194 TYR195 GLN196 HIS197 ILE198 GLU199 LYS200 PHE201 ILE202 PRO203 ARG204 GLN205 ILE206 THR207 ASN208 ILE209 LEU210 ALA211 GLY212 ILE213 LYS214 PRO215 LYS216 LEU217 TYR218 GLY219 GLU220 GLY221 LYS222 ASN223 VAL224 ARG225 ASP226 TRP227 ILE228 HIS229 THR230 ASN231 ASP232 HIS233 SER234 THR235 GLY236 VAL237 TRP238 ALA239 ILE240 LEU241 THR242 LYS243 GLY244 ARG245 MET246 GLY247 GLU248 THR249 TYR250 LEU251 ILE252 GLY253 ALA254 ASP255 GLY256 GLU257 LYS258 ASN259 ASN260 LYS261 GLU262 VAL263 LEU264 GLU265 LEU266 ILE267 LEU268 GLU269 LYS270 MET271 GLY272 GLN273 PRO274 LYS275 ASP276 ALA277 TYR278 ASP279 HIS280 VAL281 THR282 ASP283 ARG284 ALA285 GLY286 HIS287 ASP288 LEU289 ARG290 TYR291 ALA292 ILE293 ASP294 ALA295 SER296 LYS297 LEU298 ARG299 ASP300 GLU301 LEU302 GLY303 TRP304 THR305 PRO306 GLN307 PHE308 THR309 ASP310 PHE311 SER312 GLU313 GLY314 LEU315 GLU316 GLU317 THR318 ILE319 GLN320 TRP321 TYR322 THR323 ASP324 ASN325 GLN326 ASP327 TRP328 TRP329 LYS330 ALA331 GLU332 LYS333 GLU334 ALA335 VAL336 GLU337 ALA338 ASN339 TYR340 ALA341 LYS342 THR343 GLN344 GLU345 VAL346 ILE347 LYS348
Unit 2 SER2 GLN3 PHE4 LYS5 ASN6 ILE7 ILE8 VAL9 THR10 GLY11 GLY12 ALA13 GLY14 PHE15 ILE16 GLY17 SER18 ASN19 PHE20 VAL21 HIS22 TYR23 VAL24 TYR25 ASN26 ASN27 HIS28 PRO29 ASP30 VAL31 HIS32 VAL33 THR34 VAL35 LEU36 ASP37 LYS38 LEU39 THR40 TYR41 ALA42 GLY43 ASN44 LYS45 ALA46 ASN47 LEU48 GLU49 ALA50 ILE51 LEU52 GLY53 ASP54 ARG55 VAL56 GLU57 LEU58 VAL59 VAL60 GLY61 ASP62 ILE63 ALA64 ASP65 ALA66 GLU67 LEU68 VAL69 ASP70 LYS71 LEU72 ALA73 ALA74 LYS75 ALA76 ASP77 ALA78 ILE79 VAL80 HIS81 TYR82 ALA83 ALA84 GLU85 SER86 HIS87 ASN88 ASP89 ASN90 SER91 LEU92 ASN93 ASP94 PRO95 SER96 PRO97 PHE98 ILE99 HIS100 THR101 ASN102 PHE103 ILE104 GLY105 THR106 TYR107 THR108 LEU109 LEU110 GLU111 ALA112 ALA113 ARG114 LYS115 TYR116 ASP117 ILE118 ARG119 PHE120 HIS121 HIS122 VAL123 SER124 THR125 ASP126 GLU127 VAL128 TYR129 GLY130 ASP131 LEU132 PRO133 LEU134 ARG135 GLU136 ASP137 LEU138 PRO139 GLY140 HIS141 GLY142 GLU143 GLY144 PRO145 GLY146 GLU147 LYS148 PHE149 THR150 ALA151 GLU152 THR153 ASN154 TYR155 ASN156 PRO157 SER158 SER159 PRO160 TYR161 SER162 SER163 THR164 LYS165 ALA166 ALA167 SER168 ASP169 LEU170 ILE171 VAL172 LYS173 ALA174 TRP175 VAL176 ARG177 SER178 PHE179 GLY180 VAL181 LYS182 ALA183 THR184 ILE185 SER186 ASN187 CYS188 SER189 ASN190 ASN191 TYR192 GLY193 PRO194 TYR195 GLN196 HIS197 ILE198 GLU199 LYS200 PHE201 ILE202 PRO203 ARG204 GLN205 ILE206 THR207 ASN208 ILE209 LEU210 ALA211 GLY212 ILE213 LYS214 PRO215 LYS216 LEU217 TYR218 GLY219 GLU220 GLY221 LYS222 ASN223 VAL224 ARG225 ASP226 TRP227 ILE228 HIS229 THR230 ASN231 ASP232 HIS233 SER234 THR235 GLY236 VAL237 TRP238 ALA239 ILE240 LEU241 THR242 LYS243 GLY244 ARG245 MET246 GLY247 GLU248 THR249 TYR250 LEU251 ILE252 GLY253 ALA254 ASP255 GLY256 GLU257 LYS258 ASN259 ASN260 LYS261 GLU262 VAL263 LEU264 GLU265 LEU266 ILE267 LEU268 GLU269 LYS270 MET271 GLY272 GLN273 PRO274 LYS275 ASP276 ALA277 TYR278 ASP279 HIS280 VAL281 THR282 ASP283 ARG284 ALA285 GLY286 HIS287 ASP288 LEU289 ARG290 TYR291 ALA292 ILE293 ASP294 ALA295 SER296 LYS297 LEU298 ARG299 ASP300 GLU301 LEU302 GLY303 TRP304 THR305 PRO306 GLN307 PHE308 THR309 ASP310 PHE311 SER312 GLU313 GLY314 LEU315 GLU316 GLU317 THR318 ILE319 GLN320 TRP321 TYR322 THR323 ASP324 ASN325 GLN326 ASP327 TRP328 TRP329 LYS330 ALA331 GLU332 LYS333 GLU334 ALA335 VAL336 GLU337 ALA338 ASN339 TYR340 ALA341 LYS342 THR343 GLN344 GLU345 VAL346 ILE347
Ligands
Unit 3 NAD1400 TDX3500 SO46001 SO46002
Unit 4 NAD2400 TDX4500 SO46003
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany