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Title | CYTIDINE MONOPHOSPHATE KINASE FROM E.COLI IN COMPLEX WITH ARA-CYTIDINE MONOPHOSPHATE | |
Keywords | NUCLEOTIDE MONOPHOSPHATE KINASE, TRANSFERASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1KDR | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | CYTIDYLATE KINASE | A | 221 | 1699 | 0 |
2 | Protein | CYTIDYLATE KINASE | B | 221 | 1699 | 0 |
3 | RNA | A | 2 | 0 | 26 | |
4 | RNA | B | 3 | 0 | 31 | |
5 | Water | 80 | 0 | 80 | ||
total | 527 | 3398 | 137 |
Unit 1 | ALA3 ILE4 ALA5 PRO6 VAL7 ILE8 THR9 ILE10 ASP11 GLY12 PRO13 SER14 GLY15 ALA16 GLY17 LYS18 GLY19 THR20 LEU21 CYS22 LYS23 ALA24 MET25 ALA26 GLU27 ALA28 LEU29 GLN30 TRP31 HIS32 LEU33 LEU34 ASP35 SER36 GLY37 ALA38 ILE39 TYR40 ARG41 VAL42 LEU43 ALA44 LEU45 ALA46 ALA47 LEU48 HIS49 HIS50 HIS51 VAL52 ASP53 VAL54 ALA55 SER56 GLU57 ASP58 ALA59 LEU60 VAL61 PRO62 LEU63 ALA64 SER65 HIS66 LEU67 ASP68 VAL69 ARG70 PHE71 VAL72 SER73 THR74 ASN75 GLY76 ASN77 LEU78 GLU79 VAL80 ILE81 LEU82 GLU83 GLY84 GLU85 ASP86 VAL87 SER88 GLY89 GLU90 ILE91 ARG92 THR93 GLN94 GLU95 VAL96 ALA97 ASN98 ALA99 ALA100 SER101 GLN102 VAL103 ALA104 ALA105 PHE106 PRO107 ARG108 VAL109 ARG110 GLU111 ALA112 LEU113 LEU114 ARG115 ARG116 GLN117 ARG118 ALA119 PHE120 ARG121 GLU122 LEU123 PRO124 GLY125 LEU126 ILE127 ALA128 ASP129 GLY130 ARG131 ASP132 MET133 GLY134 THR135 VAL136 VAL137 PHE138 PRO139 ASP140 ALA141 PRO142 VAL143 LYS144 ILE145 PHE146 LEU147 ASP148 ALA149 SER150 SER151 GLU152 GLU153 ARG154 ALA155 HIS156 ARG157 ARG158 MET159 LEU160 GLN161 LEU162 GLN163 GLU164 LYS165 GLY166 PHE167 SER168 VAL169 ASN170 PHE171 GLU172 ARG173 LEU174 LEU175 ALA176 GLU177 ILE178 LYS179 GLU180 ARG181 ASP182 ASP183 ARG184 ASP185 ARG186 ASN187 ARG188 ALA189 VAL190 ALA191 PRO192 LEU193 VAL194 PRO195 ALA196 ALA197 ASP198 ALA199 LEU200 VAL201 LEU202 ASP203 SER204 THR205 THR206 LEU207 SER208 ILE209 GLU210 GLN211 VAL212 ILE213 GLU214 LYS215 ALA216 LEU217 GLN218 TYR219 ALA220 ARG221 GLN222 LYS223 |
Unit 2 | ALA3 ILE4 ALA5 PRO6 VAL7 ILE8 THR9 ILE10 ASP11 GLY12 PRO13 SER14 GLY15 ALA16 GLY17 LYS18 GLY19 THR20 LEU21 CYS22 LYS23 ALA24 MET25 ALA26 GLU27 ALA28 LEU29 GLN30 TRP31 HIS32 LEU33 LEU34 ASP35 SER36 GLY37 ALA38 ILE39 TYR40 ARG41 VAL42 LEU43 ALA44 LEU45 ALA46 ALA47 LEU48 HIS49 HIS50 HIS51 VAL52 ASP53 VAL54 ALA55 SER56 GLU57 ASP58 ALA59 LEU60 VAL61 PRO62 LEU63 ALA64 SER65 HIS66 LEU67 ASP68 VAL69 ARG70 PHE71 VAL72 SER73 THR74 ASN75 GLY76 ASN77 LEU78 GLU79 VAL80 ILE81 LEU82 GLU83 GLY84 GLU85 ASP86 VAL87 SER88 GLY89 GLU90 ILE91 ARG92 THR93 GLN94 GLU95 VAL96 ALA97 ASN98 ALA99 ALA100 SER101 GLN102 VAL103 ALA104 ALA105 PHE106 PRO107 ARG108 VAL109 ARG110 GLU111 ALA112 LEU113 LEU114 ARG115 ARG116 GLN117 ARG118 ALA119 PHE120 ARG121 GLU122 LEU123 PRO124 GLY125 LEU126 ILE127 ALA128 ASP129 GLY130 ARG131 ASP132 MET133 GLY134 THR135 VAL136 VAL137 PHE138 PRO139 ASP140 ALA141 PRO142 VAL143 LYS144 ILE145 PHE146 LEU147 ASP148 ALA149 SER150 SER151 GLU152 GLU153 ARG154 ALA155 HIS156 ARG157 ARG158 MET159 LEU160 GLN161 LEU162 GLN163 GLU164 LYS165 GLY166 PHE167 SER168 VAL169 ASN170 PHE171 GLU172 ARG173 LEU174 LEU175 ALA176 GLU177 ILE178 LYS179 GLU180 ARG181 ASP182 ASP183 ARG184 ASP185 ARG186 ASN187 ARG188 ALA189 VAL190 ALA191 PRO192 LEU193 VAL194 PRO195 ALA196 ALA197 ASP198 ALA199 LEU200 VAL201 LEU202 ASP203 SER204 THR205 THR206 LEU207 SER208 ILE209 GLU210 GLN211 VAL212 ILE213 GLU214 LYS215 ALA216 LEU217 GLN218 TYR219 ALA220 ARG221 GLN222 LYS223 |
Unit 3 | SO4501 CAR5407 |
Unit 4 | SO4601 SO4602 CAR6407 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |