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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE TRANSLATING 80S RIBOSOME FROM YEAST, OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 15A CRYO-EM MAP. THIS FILE 1K5X CONTAINS THE 40S RIBOSOMAL SUBUNIT, THE P-SITE BOUND TRNA AND THE MRNA CODON. THE FILE 1K5Y CONTAINS THE 60S RIBOSOMAL SUBUNIT.
Keywords CRYO-EM, 40S SACHAROMYCES CEREVISIAE RIBOSOME, HOMOLOGY MODELS
Experiment theoretical model
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1K5X     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    A 1465 1465 0
2  RNA    T 74 1375 228
3  RNA    U 3 60 0
4  Protein   40S RIBOSOMAL PROTEIN S0A  B 185 185 0
5  Protein   40S RIBOSOMAL PROTEIN S3  C 188 188 0
6  Protein   40S RIBOSOMAL PROTEIN S9  D 178 178 0
7  Protein   40S RIBOSOMAL PROTEIN S2  E 149 149 0
8  Protein   40S RIBOSOMAL PROTEIN S5  G 150 150 0
9  Protein   40S RIBOSOMAL PROTEIN S22  H 127 127 0
10  Protein   40S RIBOSOMAL PROTEIN S16  I 139 139 0
11  Protein   40S RIBOSOMAL PROTEIN S20  J 97 97 0
12  Protein   40S RIBOSOMAL PROTEIN S14  K 125 125 0
13  Protein   40S RIBOSOMAL PROTEIN S23  L 118 118 0
14  Protein   40S RIBOSOMAL PROTEIN S18  M 131 131 0
15  Protein   40S RIBOSOMAL PROTEIN S29B  N 29 29 0
16  Protein   40S RIBOSOMAL PROTEIN S13  O 65 65 0
17  Protein   40S RIBOSOMAL PROTEIN S11  Q 76 76 0
18  Protein   40S RIBOSOMAL PROTEIN S15  S 80 80 0
total       3379 4737 228
Proteins
Unit 4 ALA13 GLN14 LEU15 LEU16 LEU17 ALA18 ALA19 ASN20 THR21 HIS22 LEU23 GLY24 ALA25 ARG26 ASN27 VAL28 GLN29 VAL30 HIS31 GLN32 GLU33 PRO34 TYR35 VAL36 PHE37 ASN38 ALA39 ARG40 PRO41 ASP42 GLY43 VAL44 HIS45 VAL46 ILE47 ASN48 VAL49 GLY50 LYS51 THR52 TRP53 GLU54 LYS55 LEU56 VAL57 LEU58 ALA59 ALA60 ARG61 ILE62 ILE63 ALA64 ALA65 ILE66 PRO67 ASN68 PRO69 GLU70 ASP71 VAL72 VAL73 ALA74 ILE75 SER76 SER77 ARG78 THR79 PHE80 GLY81 GLN82 ARG83 ALA84 VAL85 LEU86 LYS87 PHE88 ALA89 ALA90 HIS91 THR92 GLY93 ALA94 THR95 PRO96 ILE97 ALA98 GLY99 ARG100 PHE101 THR102 PRO103 GLY104 SER105 PHE106 THR107 ASN108 TYR109 ILE110 THR111 ARG112 SER113 PHE114 LYS115 GLU116 PRO117 ARG118 LEU119 VAL120 ILE121 VAL122 THR123 ASP124 PRO125 ARG126 SER127 ASP128 ALA129 GLN130 ALA131 ILE132 LYS133 GLU134 ALA135 SER136 TYR137 VAL138 ASN139 ILE140 PRO141 VAL142 ILE143 ALA144 LEU145 THR146 ASP147 LEU148 ASP149 SER150 PRO151 SER152 GLU153 PHE154 VAL155 ASP156 VAL157 ALA158 ILE159 PRO160 CYS161 ASN162 ASN163 ARG164 GLY165 LYS166 HIS167 SER168 ILE169 GLY170 LEU171 ILE172 TRP173 TYR174 LEU175 LEU176 ALA177 ARG178 GLU179 VAL180 LEU181 ARG182 LEU183 ARG184 GLY185 ALA186 LEU187 VAL188 ASP189 ARG190 THR191 GLN192 PRO193 TRP194 SER195 ILE196 MET197
Unit 5 SER5 LYS6 LYS7 ARG8 LYS9 LEU10 VAL11 ALA12 ASP13 GLY14 VAL15 PHE16 TYR17 ALA18 GLU19 LEU20 ASN21 GLU22 PHE23 PHE24 THR25 ARG26 GLU27 LEU28 ALA29 GLU30 GLU31 GLY32 TYR33 SER34 GLY35 VAL36 GLU37 VAL38 ARG39 VAL40 THR41 PRO42 THR43 LYS44 THR45 GLU46 VAL47 ILE48 ILE49 ARG50 ALA51 THR52 ARG53 THR54 GLN55 ASP56 VAL57 LEU58 GLY59 GLU60 ASN61 GLY62 ARG63 ARG64 ILE65 ASN66 GLU67 LEU68 THR69 LEU70 LEU71 VAL72 GLN73 LYS74 ARG75 PHE76 LYS77 TYR78 ALA79 PRO80 GLY81 THR82 ILE83 VAL84 LEU85 TYR86 ALA87 GLU88 ARG89 VAL90 GLN91 ASP92 ARG93 GLY94 LEU95 SER96 ALA97 VAL98 ALA99 GLN100 ALA101 GLU102 SER103 MET104 LYS105 PHE106 LYS107 LEU108 LEU109 ASN110 GLY111 LEU112 ALA113 ILE114 ARG115 ARG116 ALA117 ALA118 TYR119 GLY120 VAL121 VAL122 ARG123 TYR124 VAL125 MET126 GLU127 SER128 GLY129 ALA130 LYS131 GLY132 CYS133 GLU134 VAL135 VAL136 VAL137 SER138 GLY139 LYS140 LEU141 ARG142 ALA143 ALA144 ARG145 ALA146 LYS147 ALA148 MET149 LYS150 PHE151 ALA152 ASP153 GLY154 PHE155 LEU156 ILE157 HIS158 SER159 GLY160 GLN161 PRO162 VAL163 ASN164 ASP165 PHE166 ILE167 ASP168 THR169 ALA170 THR171 ARG172 HIS173 VAL174 LEU175 MET176 ARG177 GLN178 GLY179 VAL180 LEU181 GLY182 ILE183 LYS184 VAL185 LYS186 ILE187 MET188 ARG189 ASP190 PRO191 ALA192
Unit 6 TYR19 GLU20 SER21 SER22 ARG23 LEU24 ASP25 ALA26 GLU27 LEU28 LYS29 LEU30 ALA31 GLY32 GLU33 PHE34 GLY35 LEU36 LYS37 ASN38 LYS39 LYS40 GLU41 ILE42 TYR43 ARG44 ILE45 SER46 PHE47 GLN48 LEU49 SER50 LYS51 ILE52 ARG53 ARG54 ALA55 ALA56 ARG57 ASP58 LEU59 LEU60 THR61 ARG62 ASP63 GLU64 LYS65 ASP66 PRO67 LYS68 ARG69 LEU70 PHE71 GLU72 GLY73 ASN74 ALA75 LEU76 ILE77 ARG78 ARG79 LEU80 VAL81 ARG82 VAL83 GLY84 VAL85 LEU86 SER87 GLU88 ASP89 LYS90 LYS91 LYS92 LEU93 ASP94 TYR95 VAL96 LEU97 ALA98 LEU99 LYS100 VAL101 GLU102 ASP103 PHE104 LEU105 GLU106 ARG107 ARG108 LEU109 GLN110 THR111 GLN112 VAL113 TYR114 LYS115 LEU116 GLY117 LEU118 ALA119 LYS120 SER121 VAL122 HIS123 HIS124 ALA125 ARG126 VAL127 LEU128 ILE129 THR130 GLN131 ARG132 HIS133 ILE134 ALA135 VAL136 GLY137 LYS138 GLN139 ILE140 VAL141 ASN142 ILE143 PRO144 SER145 PHE146 MET147 VAL148 ARG149 LEU150 ASP151 SER152 GLU153 LYS154 HIS155 ILE156 ASP157 PHE158 ALA159 PRO160 THR161 SER162 PRO163 PHE164 GLY165 GLY166 ALA167 ARG168 PRO169 GLY170 ARG171 VAL172 ALA173 ARG174 ARG175 ASN176 ALA177 ALA178 ARG179 LYS180 ALA181 GLU182 ALA183 SER184 GLY185 GLU186 ALA187 ALA188 ASP189 GLU190 ALA191 ASP192 GLU193 ALA194 ASP195 GLU196
Unit 7 GLY74 LEU75 GLN76 ASP77 GLU78 VAL79 MET80 ASN81 ILE82 LYS83 PRO84 VAL85 GLN86 LYS87 GLN88 THR89 ARG90 ALA91 GLY92 GLN93 ARG94 THR95 ARG96 PHE97 LYS98 ALA99 VAL100 VAL101 VAL102 VAL103 GLY104 ASP105 SER106 ASN107 GLY108 HIS109 VAL110 GLY111 LEU112 GLY113 ILE114 LYS115 THR116 ALA117 LYS118 GLU119 VAL120 ALA121 GLY122 ALA123 ILE124 ARG125 ALA126 GLY127 ILE128 ILE129 ILE130 ALA131 LYS132 LEU133 SER134 VAL135 ILE136 PRO137 ILE138 ARG139 ARG140 GLY141 TYR142 TRP143 GLY144 THR145 ASN146 LEU147 GLY148 GLN149 PRO150 HIS151 SER152 LEU153 ALA154 THR155 LYS156 THR157 THR158 GLY159 LYS160 CYS161 GLY162 SER163 VAL164 THR165 VAL166 ARG167 LEU168 ILE169 PRO170 ALA171 PRO172 ARG173 GLY174 SER175 GLY176 ILE177 VAL178 ALA179 SER180 PRO181 ALA182 VAL183 LYS184 LYS185 LEU186 LEU187 GLN188 LEU189 ALA190 GLY191 VAL192 GLU193 ASP194 VAL195 TYR196 THR197 GLN198 SER199 ASN200 GLY201 LYS202 THR203 ARG204 THR205 LEU206 GLU207 ASN208 THR209 LEU210 LYS211 ALA212 ALA213 PHE214 VAL215 ALA216 ILE217 GLY218 ASN219 THR220 TYR221 GLY222
Unit 8 ARG75 TYR76 ALA77 ASN78 LYS79 ARG80 PHE81 ARG82 LYS83 ALA84 GLN85 CYS86 PRO87 ILE88 ILE89 GLU90 ARG91 LEU92 THR93 ASN94 SER95 LEU96 MET97 MET98 ASN99 GLY100 ARG101 ASN102 ASN103 GLY104 LYS105 LYS106 LEU107 LYS108 ALA109 VAL110 ARG111 ILE112 ILE113 LYS114 HIS115 THR116 LEU117 ASP118 ILE119 ILE120 ASN121 VAL122 LEU123 THR124 ASP125 GLN126 ASN127 PRO128 ILE129 GLN130 VAL131 VAL132 VAL133 ASP134 ALA135 ILE136 THR137 ASN138 THR139 GLY140 PRO141 ARG142 GLU143 ASP144 THR145 THR146 ARG147 VAL148 GLY149 GLY150 GLY151 GLY152 ALA153 ALA154 ARG155 ARG156 GLN157 ALA158 VAL159 ASP160 VAL161 SER162 PRO163 LEU164 ARG165 ARG166 VAL167 ASN168 GLN169 ALA170 ILE171 ALA172 LEU173 LEU174 THR175 ILE176 GLY177 ALA178 ARG179 GLU180 ALA181 ALA182 PHE183 ARG184 ASN185 ILE186 LYS187 THR188 ILE189 ALA190 GLU191 THR192 LEU193 ALA194 GLU195 GLU196 LEU197 ILE198 ASN199 ALA200 ALA201 LYS202 GLY203 SER204 SER205 THR206 SER207 TYR208 ALA209 ILE210 LYS211 LYS212 LYS213 ASP214 GLU215 LEU216 GLU217 ARG218 VAL219 ALA220 LYS221 SER222 ASN223 ARG224
Unit 9 SER3 SER4 VAL5 LEU6 ALA7 ASP8 ALA9 LEU10 ASN11 ALA12 ILE13 ASN14 ASN15 ALA16 GLU17 LYS18 THR19 GLY20 LYS21 ARG22 GLN23 VAL24 LEU25 ILE26 ARG27 PRO28 SER29 SER30 LYS31 VAL32 ILE33 ILE34 LYS35 PHE36 LEU37 GLN38 VAL39 MET40 GLN41 LYS42 HIS43 GLY44 TYR45 ILE46 GLY47 GLU48 PHE49 GLU50 TYR51 ILE52 ASP53 ASP54 HIS55 ARG56 SER57 GLY58 LYS59 ILE60 VAL61 VAL62 GLN63 LEU64 ASN65 GLY66 ARG67 LEU68 ASN69 LYS70 CYS71 GLY72 VAL73 ILE74 SER75 PRO76 ARG77 PHE78 ASN79 VAL80 LYS81 ILE82 GLY83 ASP84 ILE85 GLU86 LYS87 TRP88 THR89 ALA90 ASN91 LEU92 LEU93 PRO94 ALA95 ARG96 GLN97 PHE98 GLY99 TYR100 VAL101 ILE102 LEU103 THR104 THR105 SER106 ALA107 GLY108 ILE109 MET110 ASP111 HIS112 GLU113 GLU114 ALA115 ARG116 ARG117 LYS118 HIS119 VAL120 SER121 GLY122 LYS123 ILE124 LEU125 GLY126 PHE127 VAL128 TYR129
Unit 10 PRO4 SER5 VAL6 GLN7 THR8 PHE9 GLY10 LYS11 LYS12 LYS13 SER14 ALA15 THR16 ALA17 VAL18 ALA19 HIS20 VAL21 LYS22 ALA23 GLY24 LYS25 GLY26 LEU27 ILE28 LYS29 VAL30 ASN31 GLY32 SER33 PRO34 ILE35 THR36 LEU37 VAL38 GLU39 PRO40 GLU41 ILE42 LEU43 ARG44 PHE45 LYS46 VAL47 TYR48 GLU49 PRO50 LEU51 LEU52 LEU53 VAL54 GLY55 LEU56 ASP57 LYS58 PHE59 SER60 ASN61 ILE62 ASP63 ILE64 ARG65 VAL66 ARG67 VAL68 THR69 GLY70 GLY71 GLY72 HIS73 VAL74 SER75 GLN76 VAL77 TYR78 ALA79 ILE80 ARG81 GLN82 ALA83 ILE84 ALA85 LYS86 GLY87 LEU88 VAL89 ALA90 TYR91 HIS92 GLN93 LYS94 TYR95 VAL96 ASP97 GLU98 GLN99 SER100 LYS101 ASN102 GLU103 LEU104 LYS105 LYS106 ALA107 PHE108 THR109 SER110 TYR111 ASP112 ARG113 THR114 LEU115 LEU116 ILE117 ALA118 ASP119 SER120 ARG121 ARG122 PRO123 GLU124 PRO125 LYS126 LYS127 PHE128 GLY129 GLY130 LYS131 GLY132 ALA133 ARG134 SER135 ARG136 PHE137 GLN138 LYS139 SER140 TYR141 ARG142
Unit 11 LYS21 ILE22 ARG23 ILE24 THR25 LEU26 THR27 SER28 THR29 LYS30 VAL31 LYS32 GLN33 LEU34 GLU35 ASN36 VAL37 SER38 SER39 ASN40 ILE41 VAL42 LYS43 ASN44 ALA45 GLU46 GLN47 HIS48 ASN49 LEU50 VAL51 LYS52 LYS53 GLY54 PRO55 VAL56 ARG57 LEU58 PRO59 THR60 LYS61 VAL62 LEU63 LYS64 ILE65 SER66 THR67 ARG68 LYS69 THR70 PRO71 ASN72 GLY73 GLU74 GLY75 SER76 LYS77 THR78 TRP79 GLU80 THR81 TYR82 GLU83 MET84 ARG85 ILE86 HIS87 LYS88 ARG89 TYR90 ILE91 ASP92 LEU93 GLU94 ALA95 PRO96 VAL97 GLN98 ILE99 VAL100 LYS101 ARG102 ILE103 THR104 GLN105 ILE106 THR107 ILE108 GLU109 PRO110 GLY111 VAL112 ASP113 VAL114 GLU115 VAL116 VAL117
Unit 12 ASP8 ASN9 SER10 GLN11 VAL12 PHE13 GLY14 VAL15 ALA16 ARG17 ILE18 TYR19 ALA20 SER21 PHE22 ASN23 ASP24 THR25 PHE26 VAL27 HIS28 VAL29 THR30 ASP31 LEU32 SER33 GLY34 LYS35 GLU36 THR37 ILE38 ALA39 ARG40 VAL41 THR42 GLY43 GLY44 MET45 LYS46 VAL47 LYS48 ALA49 ASP50 ARG51 ASP52 GLU53 SER54 SER55 PRO56 TYR57 ALA58 ALA59 MET60 LEU61 ALA62 ALA63 GLN64 ASP65 VAL66 ALA67 ALA68 LYS69 CYS70 ARG71 GLU72 VAL73 GLY74 ILE75 THR76 ALA77 VAL78 HIS79 VAL80 LYS81 ILE82 ARG83 ALA84 THR85 GLY86 GLY87 THR88 ARG89 THR90 LYS91 THR92 PRO93 GLY94 PRO95 GLY96 GLY97 GLN98 ALA99 ALA100 LEU101 ARG102 ALA103 LEU104 ALA105 ARG106 SER107 GLY108 LEU109 ARG110 ILE111 GLY112 ARG113 ILE114 GLU115 ASP116 VAL117 THR118 PRO119 VAL120 PRO121 SER122 ASP123 SER124 THR125 ARG126 LYS127 LYS128 GLY129 GLY130 ARG131 ARG132
Unit 13 ASN28 TYR29 LYS30 LYS31 ARG32 LEU33 LEU34 GLY35 THR36 ALA37 PHE38 LYS39 SER40 SER41 PRO42 PHE43 GLY44 GLY45 SER46 SER47 HIS48 ALA49 LYS50 GLY51 ILE52 VAL53 LEU54 GLU55 LYS56 LEU57 GLY58 ILE59 GLU60 SER61 LYS62 GLN63 PRO64 ASN65 SER66 ALA67 ILE68 ARG69 LYS70 CYS71 VAL72 ARG73 VAL74 GLN75 LEU76 ILE77 LYS78 ASN79 GLY80 LYS81 LYS82 VAL83 THR84 ALA85 PHE86 VAL87 PRO88 ASN89 ASP90 GLY91 CYS92 LEU93 ASN94 PHE95 VAL96 ASP97 GLU98 ASN99 ASP100 GLU101 VAL102 LEU103 LEU104 ALA105 GLY106 PHE107 GLY108 ARG109 LYS110 GLY111 LYS112 ALA113 LYS114 GLY115 ASP116 ILE117 PRO118 GLY119 VAL120 ARG121 PHE122 LYS123 VAL124 VAL125 LYS126 VAL127 SER128 GLY129 VAL130 SER131 LEU132 LEU133 ALA134 LEU135 TRP136 LYS137 GLU138 LYS139 LYS140 GLU141 LYS142 PRO143 ARG144 SER145
Unit 14 LEU15 ARG16 LEU17 LEU18 ASN19 THR20 ASN21 VAL22 ASP23 GLY24 ASN25 ILE26 LYS27 ILE28 VAL29 TYR30 ALA31 LEU32 THR33 THR34 ILE35 LYS36 GLY37 VAL38 GLY39 ARG40 ARG41 TYR42 SER43 ASN44 LEU45 VAL46 CYS47 LYS48 LYS49 ALA50 ASP51 VAL52 ASP53 LEU54 HIS55 LYS56 ARG57 ALA58 GLY59 GLU60 LEU61 THR62 GLN63 GLU64 GLU65 LEU66 GLU67 ARG68 ILE69 VAL70 GLN71 ILE72 MET73 GLN74 ASN75 PRO76 THR77 HIS78 TYR79 LYS80 ILE81 PRO82 ALA83 TRP84 PHE85 LEU86 ASN87 ARG88 GLN89 ASN90 ASP91 ILE92 THR93 ASP94 GLY95 LYS96 ASP97 TYR98 HIS99 THR100 LEU101 ALA102 ASN103 ASN104 VAL105 GLU106 SER107 LYS108 LEU109 ARG110 ASP111 ASP112 LEU113 GLU114 ARG115 LEU116 LYS117 LYS118 ILE119 ARG120 ALA121 HIS122 ARG123 GLY124 ILE125 ARG126 HIS127 PHE128 TRP129 GLY130 LEU131 ARG132 VAL133 ARG134 GLY135 GLN136 HIS137 THR138 LYS139 THR140 THR141 GLY142 ARG143 ARG144 ARG145
Unit 15 CYS20 ARG21 VAL22 CYS23 SER24 SER25 HIS26 THR27 GLY28 LEU29 VAL30 ARG31 LYS32 TYR33 ASP34 LEU35 ASN36 ILE37 CYS38 ARG39 GLN40 CYS41 PHE42 ARG43 GLU44 LYS45 ALA46 ASN47 ASP48
Unit 16 ILE65 THR66 GLY67 ASN68 LYS69 ILE70 MET71 ARG72 ILE73 LEU74 LYS75 SER76 ASN77 GLY78 LEU79 ALA80 PRO81 GLU82 ILE83 PRO84 GLU85 ASP86 LEU87 TYR88 TYR89 LEU90 ILE91 LYS92 LYS93 ALA94 VAL95 SER96 VAL97 ARG98 LYS99 HIS100 LEU101 GLU102 ARG103 ASN104 ARG105 LYS106 ASP107 LYS108 ASP109 ALA110 LYS111 PHE112 ARG113 LEU114 ILE115 LEU116 ILE117 GLU118 SER119 ARG120 ILE121 HIS122 ARG123 LEU124 ALA125 ARG126 TYR127 TYR128 ARG129
Unit 17 LYS68 ILE69 LEU70 THR71 GLY72 THR73 VAL74 VAL75 SER76 THR77 LYS78 MET79 HIS80 ARG81 THR82 ILE83 VAL84 ILE85 ARG86 ARG87 ALA88 TYR89 LEU90 HIS91 TYR92 ILE93 PRO94 LYS95 TYR96 ASN97 ARG98 TYR99 GLU100 LYS101 ARG102 HIS103 LYS104 ASN105 VAL106 PRO107 VAL108 HIS109 VAL110 SER111 PRO112 ALA113 PHE114 ARG115 VAL116 GLN117 VAL118 GLY119 ASP120 ILE121 VAL122 THR123 VAL124 GLY125 GLN126 CYS127 ARG128 PRO129 ILE130 SER131 LYS132 THR133 VAL134 ARG135 PHE136 ASN137 VAL138 VAL139 LYS140 VAL141 SER142 ALA143
Unit 18 ARG47 GLY48 MET49 THR50 SER51 LYS52 PRO53 ALA54 GLY55 PHE56 MET57 LYS58 LYS59 LEU60 ARG61 ALA62 ALA63 LYS64 LEU65 ALA66 ALA67 PRO68 GLU69 ASN70 GLU71 LYS72 PRO73 ALA74 PRO75 VAL76 ARG77 THR78 HIS79 MET80 ARG81 ASN82 MET83 ILE84 ILE85 VAL86 PRO87 GLU88 MET89 ILE90 GLY91 SER92 VAL93 VAL94 GLY95 ILE96 TYR97 ASN98 GLY99 LYS100 ALA101 PHE102 ASN103 GLN104 VAL105 GLU106 ILE107 ARG108 PRO109 GLU110 MET111 LEU112 GLY113 HIS114 TYR115 LEU116 GLY117 GLU118 PHE119 SER120 ILE121 THR122 TYR123 THR124 PRO125 VAL126
Nucleic acids
Unit 1 G6 G7 A8 G9 A10 G11 U12 U13 U14 G15 A16 U17 C18 C19 U20 G21 G22 C23 U24 C25 A26 G27 G28 G29 U30 G31 A32 A33 C34 G35 C36 U37 G38 G39 C40 G41 G42 C43 G44 U45 G46 C47 C48 U49 A50 A51 G52 A53 C54 A55 U56 G57 C58 A59 A60 G61 U62 C63 G64 U65 G66 C67 G68 G69 G70 C71 C72 G73 C74 G75 C76 C77 G78 U79 G80 G81 U82 C83 A84 G85 C86 G87 G88 C89 G90 G91 A92 C93 G94 G95 G96 U97 G98 A99 G100 U101 A102 A103 C104 G105 C106 G107 U108 G109 G110 G111 U112 G113 A114 C115 C116 U117 A118 C119 C120 C121 G122 G123 A124 A125 G126 A127 G128 G129 G130 G131 G132 A133 C134 A135 A136 C137 C138 C139 G140 G141 G142 G143 A144 A145 A146 C147 U148 C149 G150 G151 G152 C153 U154 A155 A156 U157 C158 C159 C160 C161 C162 A163 U164 G165 U166 G167 G168 A169 C170 C171 C172 G173 C174 C175 C176 C177 U178 U179 G180 G181 G182 G183 U184 G185 U186 G187 U188 C189 C190 A191 A192 A193 G194 G195 G196 C197 U198 U199 U200 G201 C202 C203 C204 G205 C206 U207 U208 C209 C210 G211 G212 A213 U214 G215 G216 G217 C218 C219 C220 G221 C222 G223 U224 C225 C226 C227 A228 U229 C230 A231 G232 C233 U234 A235 G236 U237 U238 G239 G240 U241 G242 G243 G244 G245 U246 A247 A248 U249 G250 G251 C252 C253 C254 A255 C256 C257 A258 A259 G260 G261 C262 G263 A264 C265 G266 A267 C268 G269 G270 G271 U272 A273 G274 C275 C276 G277 G278 U279 C280 U281 G282 A283 G284 A285 G286 G287 A288 U289 G290 G291 C292 C293 G294 G295 C296 C297 A298 C299 A300 G301 G302 G303 G304 C305 A306 C307 U308 G309 A310 G311 A312 C313 A314 C315 G316 G317 G318 C319 C320 C321 C322 A323 C324 U325 C326 C327 U328 A329 C330 G331 G332 G333 A334 G335 G336 C337 A338 G339 C340 A341 G342 U343 U344 A345 G346 G347 A348 A349 U350 C351 U352 U353 C354 C355 G356 C357 A358 A359 U360 G361 G362 G363 C364 G365 C366 A367 A368 G369 C370 C371 U372 G373 A374 C375 G376 G377 A378 G379 C380 G381 A382 C383 G384 C385 C386 G387 C388 U389 U390 G391 G392 A393 G394 G395 A396 A397 G398 A399 A400 G401 C402 C403 C404 U405 U406 C407 G408 G409 G410 G411 U412 G413 U414 A415 A416 A417 C418 U419 C420 C421 U422 G423 A424 A425 C426 G427 A428 A429 A430 C431 C432 C433 C434 C435 G436 A437 C438 G439 A440 G441 G442 G443 G444 A445 C446 U447 G448 A449 C450 G451 G452 U453 A454 A455 U456 A457 G458 C459 G460 C461 C462 G463 G464 C465 C466 A467 A468 C469 U470 C471 C472 G473 U474 G475 C476 C477 A478 G479 C480 A481 G482 C483 C484 G485 C486 G487 G488 U489 A490 A491 U492 A493 C494 G495 G496 A497 G498 G499 G500 C501 G502 C503 G504 A505 G506 C507 G508 U509 U510 A511 C512 C513 C514 G515 G516 A517 U518 U519 C520 A521 C522 U523 G524 G525 G526 C527 G528 U529 A530 A531 A532 G533 G534 G535 C536 G537 U538 G539 U540 A541 G542 G543 C544 G545 G546 C547 C548 U549 G550 G551 G552 G553 C554 G555 U556 C557 C558 C559 A560 U561 G562 U563 G564 A565 A566 A567 G568 A569 C570 C571 A572 C573 G574 G575 C576 U577 C578 A579 A580 C581 C582 G583 U584 G585 G586 G587 G588 G589 A590 G591 C592 G593 U594 G595 G596 G597 A598 U599 A600 C601 G602 C603 U604 C605 A606 G607 G608 C609 U610 A611 G612 A613 C614 G615 G616 U617 G618 G619 G620 A621 G622 A623 G624 G625 G626 U627 G628 G629 U630 G631 G632 A633 A634 U635 U636 C637 C638 C639 G640 G641 A642 G643 U644 A645 G646 C647 G648 G649 U650 G651 A652 A653 A654 U655 G656 C657 G658 C659 A660 G661 A662 U663 A664 C665 C666 G667 G668 G669 A670 G671 G672 A673 A674 C675 G676 C677 C678 G679 A680 U681 G682 G683 C684 G685 A686 A687 G688 G689 C690 A691 G692 C693 C694 A695 C696 C697 U698 G699 G700 U701 C702 C703 A704 C705 C706 C707 G708 U709 G710 A711 C712 G713 C714 U715 G716 A717 G718 G719 C720 G721 C722 G723 A724 A725 A726 G727 C728 G729 U730 G731 G732 G733 G734 A735 G736 C737 A738 A739 A740 C741 C742 G743 G744 A745 U746 U747 A748 G749 A750 U751 A752 C753 C754 C755 G756 G757 G758 U759 A760 G761 U762 C763 C764 A765 C766 G767 C768 C769 C770 U771 A772 A773 A774 C775 G776 A777 U778 G779 C780 G781 C782 G783 C784 U785 A786 G787 G788 U789 C790 U791 C792 U793 G794 G795 G796 U797 C798 U799 C800 C801 U802 G803 G804 G805 G806 G807 C808 C809 G810 A811 A812 G813 C814 U815 A816 A817 C818 G819 C820 G821 U822 U823 A824 A825 G826 C827 G828 C829 G830 C831 C832 G833 C834 C835 U836 G837 G838 G839 G840 A841 G842 U843 A844 C845 G846 G847 C848 C849 G850 C851 A852 A853 G854 G855 C856 U857 G858 A859 A860 A861 C862 U863 C864 A865 A866 A867 G868 G869 A870 A871 U872 U873 G874 A875 C876 G877 G878 G879 G880 G881 C882 C883 C884 G885 C886 A887 C888 A889 A890 G891 C892 G893 G894 U895 G896 G897 A898 G899 C900 A901 U902 G903 U904 G905 G906 U907 U908 U909 A910 A911 U912 U913 C914 G915 A916 A917 G918 C919 A920 A921 C922 G923 C924 G925 A926 A927 G928 A929 A930 C931 C932 U933 U934 A935 C936 C937 A938 G939 G940 C941 C942 U943 U944 G945 A946 C947 A948 U949 G950 C951 U952 A953 G954 G955 G956 A957 A958 C959 C960 C961 G962 G963 G964 U965 G966 A967 A968 A969 G970 C971 C972 U973 G974 G975 G976 G977 C978 C979 C980 U981 A982 G983 C984 A985 C986 A987 G988 G989 U990 G991 C992 U993 G994 C995 A996 U997 G998 G999 C1000 C1001 G1002 U1003 C1004 G1005 U1006 C1007 A1008 G1009 C1010 U1011 C1012 G1013 U1014 G1015 C1016 C1017 G1018 U1019 G1020 A1021 G1022 G1023 U1024 G1025 U1026 U1027 G1028 G1029 G1030 U1031 U1032 A1033 A1034 G1035 U1036 C1037 C1038 C1039 G1040 C1041 A1042 A1043 C1044 G1045 A1046 G1047 C1048 G1049 C1050 A1051 A1052 C1053 C1054 C1055 C1056 C1057 G1058 C1059 C1060 G1061 U1062 U1063 A1064 G1065 U1066 U1067 G1068 C1069 C1070 A1071 G1072 C1073 G1074 G1075 U1076 U1077 C1078 G1079 G1080 C1081 C1082 G1083 G1084 G1085 C1086 A1087 C1088 U1089 C1090 U1091 A1092 A1093 C1094 G1095 G1096 G1097 A1098 C1099 U1100 G1101 C1102 C1103 C1104 G1105 C1106 G1107 A1108 A1109 A1110 G1111 C1112 G1113 G1114 G1115 A1116 G1117 G1118 A1119 A1120 G1121 G1122 A1123 G1124 G1125 G1126 G1127 A1128 C1129 G1130 A1131 C1132 G1133 U1134 C1135 U1136 G1137 G1138 U1139 C1140 A1141 G1142 C1143 A1144 U1145 G1146 G1147 C1148 C1149 C1150 U1151 U1152 A1153 C1154 G1155 G1156 C1157 C1158 U1159 G1160 G1161 G1162 C1163 G1164 A1165 C1166 A1167 C1168 A1169 C1170 G1171 U1172 G1173 C1174 U1175 A1176 C1177 A1178 A1179 U1180 G1181 C1182 C1183 C1184 A1185 C1186 U1187 A1188 C1189 A1190 A1191 A1192 G1193 C1194 G1195 A1196 U1197 G1198 C1199 C1200 A1201 C1202 C1203 C1204 G1205 G1206 C1207 A1208 A1209 C1210 G1211 G1212 G1213 G1214 A1215 G1216 C1217 U1218 A1219 A1220 U1221 C1222 G1223 C1224 A1225 A1226 A1227 A1228 A1229 G1230 G1231 U1232 G1233 G1234 G1235 C1236 C1237 C1238 A1239 G1240 U1241 U1242 C1243 G1244 G1245 A1246 U1247 U1248 G1249 G1250 G1251 G1252 U1253 C1254 U1255 G1256 C1257 A1258 A1259 C1260 C1261 C1262 G1263 A1264 C1265 C1266 C1267 C1268 A1269 U1270 G1271 A1272 A1273 G1274 C1275 C1276 G1277 G1278 A1279 A1280 U1281 C1282 G1283 C1284 U1285 A1286 G1287 U1288 A1289 A1290 U1291 C1292 G1293 C1294 G1295 G1296 A1297 U1298 C1299 A1300 G1301 C1302 C1303 A1304 U1305 G1306 C1307 C1308 G1309 C1310 G1311 G1312 U1313 G1314 A1315 A1316 U1317 A1318 C1319 G1320 U1321 U1322 C1323 C1324 C1325 G1326 G1327 G1328 C1329 C1330 U1331 U1332 G1333 U1334 A1335 C1336 A1337 C1338 A1339 C1340 C1341 G1342 C1343 C1344 C1345 G1346 U1347 C1348 A1349 C1350 G1351 C1352 C1353 A1354 U1355 G1356 G1357 G1358 A1359 G1360 C1361 G1362 G1363 G1364 C1365 U1366 C1367 U1368 A1369 C1370 C1371 C1372 G1373 A1374 A1375 G1376 U1377 C1378 G1379 C1380 C1381 G1382 G1383 G1384 A1385 G1386 C1387 C1388 U1389 A1390 C1391 G1392 G1393 G1394 C1395 A1396 G1397 G1398 C1399 G1400 C1401 C1402 G1403 A1404 G1405 G1406 G1407 U1408 A1409 G1410 G1411 G1412 C1413 C1414 C1415 G1416 U1417 G1418 A1419 C1420 U1421 G1422 G1423 G1424 G1425 C1426 G1427 A1428 A1429 G1430 U1431 C1432 G1433 U1434 A1435 A1436 C1437 A1438 A1439 G1440 G1441 U1442 A1443 G1444 C1445 U1446 G1447 U1448 A1449 C1450 C1451 G1452 G1453 A1454 A1455 G1456 G1457 U1458 G1459 C1460 G1461 G1462 C1463 U1464 G1465 G1466 A1467 U1468 C1469 A1470
Unit 2 U1 C2 C3 G4 U5 G6 A7 U8 A9 G10 U11 U12 PSU13 A14 A15 H2U16 G17 G18 H2U19 C20 A21 G22 A23 A24 U25 M2G26 C27 C28 A29 G30 A31 OMC32 U33 G34 A35 A36 YYG37 A38 U39 5MC40 U41 G42 G43 A44 G45 A46 U47 5MC48 G49 G50 G51 G52 5MU53 PSU54 C55 A56 A57 U58 U59 C60 C61 C62 C63 G64 U65 C66 G67 C68 G69 G70 A71 G72 C73 C74
Unit 3 U1 U2 U3
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany