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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE STREPTOCOCCUS PNEUMONIAE PHOSPHOMEV KINASE (PMK)
Keywords ALPHA/BETA SINGLE DOMAIN BELONGING TO THE GHMP KINASE SUPERF MVAK2, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATI YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1K47     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PHOSPHOMEVALONATE KINASE  A 322 2436 64
2  Protein   PHOSPHOMEVALONATE KINASE  B 322 2436 64
3  Protein   PHOSPHOMEVALONATE KINASE  C 322 2436 64
4  Protein   PHOSPHOMEVALONATE KINASE  D 322 2436 64
5  Protein   PHOSPHOMEVALONATE KINASE  E 322 2436 64
6  Protein   PHOSPHOMEVALONATE KINASE  F 322 2436 64
7 Water     779 0 779
total       2711 14616 1163
Proteins
Unit 1 MSE1 ILE2 ALA3 VAL4 LYS5 THR6 CYS7 GLY8 LYS9 LEU10 TYR11 TRP12 ALA13 GLY14 GLU15 TYR16 ALA17 ILE18 LEU19 GLU20 PRO21 GLY22 GLN23 LEU24 ALA25 LEU26 ILE27 LYS28 ASP29 ILE30 PRO31 ILE32 TYR33 MSE34 ARG35 ALA36 GLU37 ILE38 ALA39 PHE40 SER41 ASP42 SER43 TYR44 ARG45 ILE46 TYR47 SER48 ASP49 MSE50 ASN60 PRO61 ASP62 TYR63 SER64 LEU65 ILE66 GLN67 GLU68 THR69 ILE70 ALA71 LEU72 MSE73 GLY74 ASP75 PHE76 LEU77 ALA78 VAL79 ARG80 GLY81 GLN82 ASN83 LEU84 ARG85 PRO86 PHE87 SER88 LEU89 ALA90 ILE91 TYR92 GLY93 LYS94 MSE95 GLU96 ARG97 GLU98 GLY99 LYS100 LYS101 PHE102 GLY103 LEU104 GLY105 SER106 SER107 GLY108 SER109 VAL110 VAL111 VAL112 LEU113 VAL114 VAL115 LYS116 ALA117 LEU118 LEU119 ALA120 LEU121 TYR122 ASN123 LEU124 SER125 VAL126 ASP127 GLN128 ASN129 LEU130 LEU131 PHE132 LYS133 LEU134 THR135 SER136 ALA137 VAL138 LEU139 LEU140 LYS141 ARG142 GLY143 ASP144 ASN145 GLY146 SER147 MSE148 GLY149 ASP150 LEU151 ALA152 CYS153 ILE154 ALA155 ALA156 GLU157 ASP158 LEU159 VAL160 LEU161 TYR162 GLN163 SER164 PHE165 ASP166 ARG167 GLN168 LYS169 VAL170 ALA171 ALA172 TRP173 LEU174 GLU175 GLU176 GLU177 ASN178 LEU179 ALA180 THR181 VAL182 LEU183 GLU184 ARG185 ASP186 TRP187 GLY188 PHE189 SER190 ILE191 SER192 GLN193 VAL194 LYS195 PRO196 THR197 LEU198 GLU199 CYS200 ASP201 PHE202 LEU203 VAL204 GLY205 TRP206 THR207 LYS208 GLU209 VAL210 ALA211 VAL212 SER213 SER214 HIS215 MSE216 VAL217 GLN218 GLN219 ILE220 LYS221 GLN222 ASN223 ILE224 ASN225 GLN226 ASN227 PHE228 LEU229 THR230 SER231 SER232 LYS233 GLU234 THR235 VAL236 VAL237 SER238 LEU239 VAL240 GLU241 ALA242 LEU243 GLU244 GLN245 GLY246 LYS247 SER248 GLU249 LYS250 ILE251 ILE252 GLU253 GLN254 VAL255 GLU256 VAL257 ALA258 SER259 LYS260 LEU261 LEU262 GLU263 GLY264 LEU265 SER266 THR267 ASP268 ILE269 TYR270 THR271 PRO272 LEU273 LEU274 ARG275 GLN276 LEU277 LYS278 GLU279 ALA280 SER281 GLN282 ASP283 LEU284 GLN285 ALA286 VAL287 ALA288 LYS289 SER290 SER291 GLY292 ALA293 GLY294 GLY295 GLY296 ASP297 CYS298 GLY299 ILE300 ALA301 LEU302 SER303 PHE304 ASP305 ALA306 GLN307 SER308 THR309 LYS310 THR311 LEU312 LYS313 ASN314 ARG315 TRP316 ALA317 ASP318 LEU319 GLY320 ILE321 GLU322 LEU323 LEU324 TYR325 GLN326 GLU327 ARG328 ILE329 HIS1001 MSE1002
Unit 2 MSE1 ILE2 ALA3 VAL4 LYS5 THR6 CYS7 GLY8 LYS9 LEU10 TYR11 TRP12 ALA13 GLY14 GLU15 TYR16 ALA17 ILE18 LEU19 GLU20 PRO21 GLY22 GLN23 LEU24 ALA25 LEU26 ILE27 LYS28 ASP29 ILE30 PRO31 ILE32 TYR33 MSE34 ARG35 ALA36 GLU37 ILE38 ALA39 PHE40 SER41 ASP42 SER43 TYR44 ARG45 ILE46 TYR47 SER48 ASP49 MSE50 ASN60 PRO61 ASP62 TYR63 SER64 LEU65 ILE66 GLN67 GLU68 THR69 ILE70 ALA71 LEU72 MSE73 GLY74 ASP75 PHE76 LEU77 ALA78 VAL79 ARG80 GLY81 GLN82 ASN83 LEU84 ARG85 PRO86 PHE87 SER88 LEU89 ALA90 ILE91 TYR92 GLY93 LYS94 MSE95 GLU96 ARG97 GLU98 GLY99 LYS100 LYS101 PHE102 GLY103 LEU104 GLY105 SER106 SER107 GLY108 SER109 VAL110 VAL111 VAL112 LEU113 VAL114 VAL115 LYS116 ALA117 LEU118 LEU119 ALA120 LEU121 TYR122 ASN123 LEU124 SER125 VAL126 ASP127 GLN128 ASN129 LEU130 LEU131 PHE132 LYS133 LEU134 THR135 SER136 ALA137 VAL138 LEU139 LEU140 LYS141 ARG142 GLY143 ASP144 ASN145 GLY146 SER147 MSE148 GLY149 ASP150 LEU151 ALA152 CYS153 ILE154 ALA155 ALA156 GLU157 ASP158 LEU159 VAL160 LEU161 TYR162 GLN163 SER164 PHE165 ASP166 ARG167 GLN168 LYS169 VAL170 ALA171 ALA172 TRP173 LEU174 GLU175 GLU176 GLU177 ASN178 LEU179 ALA180 THR181 VAL182 LEU183 GLU184 ARG185 ASP186 TRP187 GLY188 PHE189 SER190 ILE191 SER192 GLN193 VAL194 LYS195 PRO196 THR197 LEU198 GLU199 CYS200 ASP201 PHE202 LEU203 VAL204 GLY205 TRP206 THR207 LYS208 GLU209 VAL210 ALA211 VAL212 SER213 SER214 HIS215 MSE216 VAL217 GLN218 GLN219 ILE220 LYS221 GLN222 ASN223 ILE224 ASN225 GLN226 ASN227 PHE228 LEU229 THR230 SER231 SER232 LYS233 GLU234 THR235 VAL236 VAL237 SER238 LEU239 VAL240 GLU241 ALA242 LEU243 GLU244 GLN245 GLY246 LYS247 SER248 GLU249 LYS250 ILE251 ILE252 GLU253 GLN254 VAL255 GLU256 VAL257 ALA258 SER259 LYS260 LEU261 LEU262 GLU263 GLY264 LEU265 SER266 THR267 ASP268 ILE269 TYR270 THR271 PRO272 LEU273 LEU274 ARG275 GLN276 LEU277 LYS278 GLU279 ALA280 SER281 GLN282 ASP283 LEU284 GLN285 ALA286 VAL287 ALA288 LYS289 SER290 SER291 GLY292 ALA293 GLY294 GLY295 GLY296 ASP297 CYS298 GLY299 ILE300 ALA301 LEU302 SER303 PHE304 ASP305 ALA306 GLN307 SER308 THR309 LYS310 THR311 LEU312 LYS313 ASN314 ARG315 TRP316 ALA317 ASP318 LEU319 GLY320 ILE321 GLU322 LEU323 LEU324 TYR325 GLN326 GLU327 ARG328 ILE329 HIS1001 MSE1002
Unit 3 MSE1 ILE2 ALA3 VAL4 LYS5 THR6 CYS7 GLY8 LYS9 LEU10 TYR11 TRP12 ALA13 GLY14 GLU15 TYR16 ALA17 ILE18 LEU19 GLU20 PRO21 GLY22 GLN23 LEU24 ALA25 LEU26 ILE27 LYS28 ASP29 ILE30 PRO31 ILE32 TYR33 MSE34 ARG35 ALA36 GLU37 ILE38 ALA39 PHE40 SER41 ASP42 SER43 TYR44 ARG45 ILE46 TYR47 SER48 ASP49 MSE50 ASN60 PRO61 ASP62 TYR63 SER64 LEU65 ILE66 GLN67 GLU68 THR69 ILE70 ALA71 LEU72 MSE73 GLY74 ASP75 PHE76 LEU77 ALA78 VAL79 ARG80 GLY81 GLN82 ASN83 LEU84 ARG85 PRO86 PHE87 SER88 LEU89 ALA90 ILE91 TYR92 GLY93 LYS94 MSE95 GLU96 ARG97 GLU98 GLY99 LYS100 LYS101 PHE102 GLY103 LEU104 GLY105 SER106 SER107 GLY108 SER109 VAL110 VAL111 VAL112 LEU113 VAL114 VAL115 LYS116 ALA117 LEU118 LEU119 ALA120 LEU121 TYR122 ASN123 LEU124 SER125 VAL126 ASP127 GLN128 ASN129 LEU130 LEU131 PHE132 LYS133 LEU134 THR135 SER136 ALA137 VAL138 LEU139 LEU140 LYS141 ARG142 GLY143 ASP144 ASN145 GLY146 SER147 MSE148 GLY149 ASP150 LEU151 ALA152 CYS153 ILE154 ALA155 ALA156 GLU157 ASP158 LEU159 VAL160 LEU161 TYR162 GLN163 SER164 PHE165 ASP166 ARG167 GLN168 LYS169 VAL170 ALA171 ALA172 TRP173 LEU174 GLU175 GLU176 GLU177 ASN178 LEU179 ALA180 THR181 VAL182 LEU183 GLU184 ARG185 ASP186 TRP187 GLY188 PHE189 SER190 ILE191 SER192 GLN193 VAL194 LYS195 PRO196 THR197 LEU198 GLU199 CYS200 ASP201 PHE202 LEU203 VAL204 GLY205 TRP206 THR207 LYS208 GLU209 VAL210 ALA211 VAL212 SER213 SER214 HIS215 MSE216 VAL217 GLN218 GLN219 ILE220 LYS221 GLN222 ASN223 ILE224 ASN225 GLN226 ASN227 PHE228 LEU229 THR230 SER231 SER232 LYS233 GLU234 THR235 VAL236 VAL237 SER238 LEU239 VAL240 GLU241 ALA242 LEU243 GLU244 GLN245 GLY246 LYS247 SER248 GLU249 LYS250 ILE251 ILE252 GLU253 GLN254 VAL255 GLU256 VAL257 ALA258 SER259 LYS260 LEU261 LEU262 GLU263 GLY264 LEU265 SER266 THR267 ASP268 ILE269 TYR270 THR271 PRO272 LEU273 LEU274 ARG275 GLN276 LEU277 LYS278 GLU279 ALA280 SER281 GLN282 ASP283 LEU284 GLN285 ALA286 VAL287 ALA288 LYS289 SER290 SER291 GLY292 ALA293 GLY294 GLY295 GLY296 ASP297 CYS298 GLY299 ILE300 ALA301 LEU302 SER303 PHE304 ASP305 ALA306 GLN307 SER308 THR309 LYS310 THR311 LEU312 LYS313 ASN314 ARG315 TRP316 ALA317 ASP318 LEU319 GLY320 ILE321 GLU322 LEU323 LEU324 TYR325 GLN326 GLU327 ARG328 ILE329 HIS1001 MSE1002
Unit 4 MSE1 ILE2 ALA3 VAL4 LYS5 THR6 CYS7 GLY8 LYS9 LEU10 TYR11 TRP12 ALA13 GLY14 GLU15 TYR16 ALA17 ILE18 LEU19 GLU20 PRO21 GLY22 GLN23 LEU24 ALA25 LEU26 ILE27 LYS28 ASP29 ILE30 PRO31 ILE32 TYR33 MSE34 ARG35 ALA36 GLU37 ILE38 ALA39 PHE40 SER41 ASP42 SER43 TYR44 ARG45 ILE46 TYR47 SER48 ASP49 MSE50 ASN60 PRO61 ASP62 TYR63 SER64 LEU65 ILE66 GLN67 GLU68 THR69 ILE70 ALA71 LEU72 MSE73 GLY74 ASP75 PHE76 LEU77 ALA78 VAL79 ARG80 GLY81 GLN82 ASN83 LEU84 ARG85 PRO86 PHE87 SER88 LEU89 ALA90 ILE91 TYR92 GLY93 LYS94 MSE95 GLU96 ARG97 GLU98 GLY99 LYS100 LYS101 PHE102 GLY103 LEU104 GLY105 SER106 SER107 GLY108 SER109 VAL110 VAL111 VAL112 LEU113 VAL114 VAL115 LYS116 ALA117 LEU118 LEU119 ALA120 LEU121 TYR122 ASN123 LEU124 SER125 VAL126 ASP127 GLN128 ASN129 LEU130 LEU131 PHE132 LYS133 LEU134 THR135 SER136 ALA137 VAL138 LEU139 LEU140 LYS141 ARG142 GLY143 ASP144 ASN145 GLY146 SER147 MSE148 GLY149 ASP150 LEU151 ALA152 CYS153 ILE154 ALA155 ALA156 GLU157 ASP158 LEU159 VAL160 LEU161 TYR162 GLN163 SER164 PHE165 ASP166 ARG167 GLN168 LYS169 VAL170 ALA171 ALA172 TRP173 LEU174 GLU175 GLU176 GLU177 ASN178 LEU179 ALA180 THR181 VAL182 LEU183 GLU184 ARG185 ASP186 TRP187 GLY188 PHE189 SER190 ILE191 SER192 GLN193 VAL194 LYS195 PRO196 THR197 LEU198 GLU199 CYS200 ASP201 PHE202 LEU203 VAL204 GLY205 TRP206 THR207 LYS208 GLU209 VAL210 ALA211 VAL212 SER213 SER214 HIS215 MSE216 VAL217 GLN218 GLN219 ILE220 LYS221 GLN222 ASN223 ILE224 ASN225 GLN226 ASN227 PHE228 LEU229 THR230 SER231 SER232 LYS233 GLU234 THR235 VAL236 VAL237 SER238 LEU239 VAL240 GLU241 ALA242 LEU243 GLU244 GLN245 GLY246 LYS247 SER248 GLU249 LYS250 ILE251 ILE252 GLU253 GLN254 VAL255 GLU256 VAL257 ALA258 SER259 LYS260 LEU261 LEU262 GLU263 GLY264 LEU265 SER266 THR267 ASP268 ILE269 TYR270 THR271 PRO272 LEU273 LEU274 ARG275 GLN276 LEU277 LYS278 GLU279 ALA280 SER281 GLN282 ASP283 LEU284 GLN285 ALA286 VAL287 ALA288 LYS289 SER290 SER291 GLY292 ALA293 GLY294 GLY295 GLY296 ASP297 CYS298 GLY299 ILE300 ALA301 LEU302 SER303 PHE304 ASP305 ALA306 GLN307 SER308 THR309 LYS310 THR311 LEU312 LYS313 ASN314 ARG315 TRP316 ALA317 ASP318 LEU319 GLY320 ILE321 GLU322 LEU323 LEU324 TYR325 GLN326 GLU327 ARG328 ILE329 HIS1001 MSE1002
Unit 5 MSE1 ILE2 ALA3 VAL4 LYS5 THR6 CYS7 GLY8 LYS9 LEU10 TYR11 TRP12 ALA13 GLY14 GLU15 TYR16 ALA17 ILE18 LEU19 GLU20 PRO21 GLY22 GLN23 LEU24 ALA25 LEU26 ILE27 LYS28 ASP29 ILE30 PRO31 ILE32 TYR33 MSE34 ARG35 ALA36 GLU37 ILE38 ALA39 PHE40 SER41 ASP42 SER43 TYR44 ARG45 ILE46 TYR47 SER48 ASP49 MSE50 ASN60 PRO61 ASP62 TYR63 SER64 LEU65 ILE66 GLN67 GLU68 THR69 ILE70 ALA71 LEU72 MSE73 GLY74 ASP75 PHE76 LEU77 ALA78 VAL79 ARG80 GLY81 GLN82 ASN83 LEU84 ARG85 PRO86 PHE87 SER88 LEU89 ALA90 ILE91 TYR92 GLY93 LYS94 MSE95 GLU96 ARG97 GLU98 GLY99 LYS100 LYS101 PHE102 GLY103 LEU104 GLY105 SER106 SER107 GLY108 SER109 VAL110 VAL111 VAL112 LEU113 VAL114 VAL115 LYS116 ALA117 LEU118 LEU119 ALA120 LEU121 TYR122 ASN123 LEU124 SER125 VAL126 ASP127 GLN128 ASN129 LEU130 LEU131 PHE132 LYS133 LEU134 THR135 SER136 ALA137 VAL138 LEU139 LEU140 LYS141 ARG142 GLY143 ASP144 ASN145 GLY146 SER147 MSE148 GLY149 ASP150 LEU151 ALA152 CYS153 ILE154 ALA155 ALA156 GLU157 ASP158 LEU159 VAL160 LEU161 TYR162 GLN163 SER164 PHE165 ASP166 ARG167 GLN168 LYS169 VAL170 ALA171 ALA172 TRP173 LEU174 GLU175 GLU176 GLU177 ASN178 LEU179 ALA180 THR181 VAL182 LEU183 GLU184 ARG185 ASP186 TRP187 GLY188 PHE189 SER190 ILE191 SER192 GLN193 VAL194 LYS195 PRO196 THR197 LEU198 GLU199 CYS200 ASP201 PHE202 LEU203 VAL204 GLY205 TRP206 THR207 LYS208 GLU209 VAL210 ALA211 VAL212 SER213 SER214 HIS215 MSE216 VAL217 GLN218 GLN219 ILE220 LYS221 GLN222 ASN223 ILE224 ASN225 GLN226 ASN227 PHE228 LEU229 THR230 SER231 SER232 LYS233 GLU234 THR235 VAL236 VAL237 SER238 LEU239 VAL240 GLU241 ALA242 LEU243 GLU244 GLN245 GLY246 LYS247 SER248 GLU249 LYS250 ILE251 ILE252 GLU253 GLN254 VAL255 GLU256 VAL257 ALA258 SER259 LYS260 LEU261 LEU262 GLU263 GLY264 LEU265 SER266 THR267 ASP268 ILE269 TYR270 THR271 PRO272 LEU273 LEU274 ARG275 GLN276 LEU277 LYS278 GLU279 ALA280 SER281 GLN282 ASP283 LEU284 GLN285 ALA286 VAL287 ALA288 LYS289 SER290 SER291 GLY292 ALA293 GLY294 GLY295 GLY296 ASP297 CYS298 GLY299 ILE300 ALA301 LEU302 SER303 PHE304 ASP305 ALA306 GLN307 SER308 THR309 LYS310 THR311 LEU312 LYS313 ASN314 ARG315 TRP316 ALA317 ASP318 LEU319 GLY320 ILE321 GLU322 LEU323 LEU324 TYR325 GLN326 GLU327 ARG328 ILE329 HIS1001 MSE1002
Unit 6 MSE1 ILE2 ALA3 VAL4 LYS5 THR6 CYS7 GLY8 LYS9 LEU10 TYR11 TRP12 ALA13 GLY14 GLU15 TYR16 ALA17 ILE18 LEU19 GLU20 PRO21 GLY22 GLN23 LEU24 ALA25 LEU26 ILE27 LYS28 ASP29 ILE30 PRO31 ILE32 TYR33 MSE34 ARG35 ALA36 GLU37 ILE38 ALA39 PHE40 SER41 ASP42 SER43 TYR44 ARG45 ILE46 TYR47 SER48 ASP49 MSE50 ASN60 PRO61 ASP62 TYR63 SER64 LEU65 ILE66 GLN67 GLU68 THR69 ILE70 ALA71 LEU72 MSE73 GLY74 ASP75 PHE76 LEU77 ALA78 VAL79 ARG80 GLY81 GLN82 ASN83 LEU84 ARG85 PRO86 PHE87 SER88 LEU89 ALA90 ILE91 TYR92 GLY93 LYS94 MSE95 GLU96 ARG97 GLU98 GLY99 LYS100 LYS101 PHE102 GLY103 LEU104 GLY105 SER106 SER107 GLY108 SER109 VAL110 VAL111 VAL112 LEU113 VAL114 VAL115 LYS116 ALA117 LEU118 LEU119 ALA120 LEU121 TYR122 ASN123 LEU124 SER125 VAL126 ASP127 GLN128 ASN129 LEU130 LEU131 PHE132 LYS133 LEU134 THR135 SER136 ALA137 VAL138 LEU139 LEU140 LYS141 ARG142 GLY143 ASP144 ASN145 GLY146 SER147 MSE148 GLY149 ASP150 LEU151 ALA152 CYS153 ILE154 ALA155 ALA156 GLU157 ASP158 LEU159 VAL160 LEU161 TYR162 GLN163 SER164 PHE165 ASP166 ARG167 GLN168 LYS169 VAL170 ALA171 ALA172 TRP173 LEU174 GLU175 GLU176 GLU177 ASN178 LEU179 ALA180 THR181 VAL182 LEU183 GLU184 ARG185 ASP186 TRP187 GLY188 PHE189 SER190 ILE191 SER192 GLN193 VAL194 LYS195 PRO196 THR197 LEU198 GLU199 CYS200 ASP201 PHE202 LEU203 VAL204 GLY205 TRP206 THR207 LYS208 GLU209 VAL210 ALA211 VAL212 SER213 SER214 HIS215 MSE216 VAL217 GLN218 GLN219 ILE220 LYS221 GLN222 ASN223 ILE224 ASN225 GLN226 ASN227 PHE228 LEU229 THR230 SER231 SER232 LYS233 GLU234 THR235 VAL236 VAL237 SER238 LEU239 VAL240 GLU241 ALA242 LEU243 GLU244 GLN245 GLY246 LYS247 SER248 GLU249 LYS250 ILE251 ILE252 GLU253 GLN254 VAL255 GLU256 VAL257 ALA258 SER259 LYS260 LEU261 LEU262 GLU263 GLY264 LEU265 SER266 THR267 ASP268 ILE269 TYR270 THR271 PRO272 LEU273 LEU274 ARG275 GLN276 LEU277 LYS278 GLU279 ALA280 SER281 GLN282 ASP283 LEU284 GLN285 ALA286 VAL287 ALA288 LYS289 SER290 SER291 GLY292 ALA293 GLY294 GLY295 GLY296 ASP297 CYS298 GLY299 ILE300 ALA301 LEU302 SER303 PHE304 ASP305 ALA306 GLN307 SER308 THR309 LYS310 THR311 LEU312 LYS313 ASN314 ARG315 TRP316 ALA317 ASP318 LEU319 GLY320 ILE321 GLU322 LEU323 LEU324 TYR325 GLN326 GLU327 ARG328 ILE329 HIS1001 MSE1002
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany