1JKU - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF MANGANESE CATALASE FROM LACTOBACILLUS PLANTARUM
• Keywords: HEXAMER, CATALASE DIMANGANESE, METALLOENZYME, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1JKU	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PSEUDOCATALASE	A	266	2084	0
2	Protein	PSEUDOCATALASE	B	266	2084	0
3	Protein	PSEUDOCATALASE	C	266	2084	0
4	Protein	PSEUDOCATALASE	D	266	2084	0
5	Protein	PSEUDOCATALASE	E	266	2084	0
6	Protein	PSEUDOCATALASE	F	266	2084	0
7	Ligand	PSEUDOCATALASE	A	6	0	6
8	Ligand	PSEUDOCATALASE	B	6	0	6
9	Ligand	PSEUDOCATALASE	C	6	0	6
10	Ligand	PSEUDOCATALASE	D	6	0	6
11	Ligand	PSEUDOCATALASE	E	6	0	6
12	Ligand	PSEUDOCATALASE	F	6	0	6
13	Water			989	0	989
total				2621	12504	1025

Proteins

Unit 1	MET 1 PHE 2 LYS 3 HIS 4 THR 5 ARG 6 LYS 7 LEU 8 GLN 9 TYR 10 ASN 11 ALA 12 LYS 13 PRO 14 ASP 15 ARG 16 SER 17 ASP 18 PRO 19 ILE 20 MET 21 ALA 22 ARG 23 ARG 24 LEU 25 GLN 26 GLU 27 SER 28 LEU 29 GLY 30 GLY 31 GLN 32 TRP 33 GLY 34 GLU 35 THR 36 THR 37 GLY 38 MET 39 MET 40 SER 41 TYR 42 LEU 43 SER 44 GLN 45 GLY 46 TRP 47 ALA 48 SER 49 THR 50 GLY 51 ALA 52 GLU 53 LYS 54 TYR 55 LYS 56 ASP 57 LEU 58 LEU 59 LEU 60 ASP 61 THR 62 GLY 63 THR 64 GLU 65 GLU 66 MET 67 ALA 68 HIS 69 VAL 70 GLU 71 MET 72 ILE 73 SER 74 THR 75 MET 76 ILE 77 GLY 78 TYR 79 LEU 80 LEU 81 GLU 82 ASP 83 ALA 84 PRO 85 PHE 86 GLY 87 PRO 88 GLU 89 ASP 90 LEU 91 LYS 92 ARG 93 ASP 94 PRO 95 SER 96 LEU 97 ALA 98 THR 99 THR 100 MET 101 ALA 102 GLY 103 MET 104 ASP 105 PRO 106 GLU 107 HIS 108 SER 109 LEU 110 VAL 111 HIS 112 GLY 113 LEU 114 ASN 115 ALA 116 SER 117 LEU 118 ASN 119 ASN 120 PRO 121 ASN 122 GLY 123 ALA 124 ALA 125 TRP 126 ASN 127 ALA 128 GLY 129 TYR 130 VAL 131 THR 132 SER 133 SER 134 GLY 135 ASN 136 LEU 137 VAL 138 ALA 139 ASP 140 MET 141 ARG 142 PHE 143 ASN 144 VAL 145 VAL 146 ARG 147 GLU 148 SER 149 GLU 150 ALA 151 ARG 152 LEU 153 GLN 154 VAL 155 SER 156 ARG 157 LEU 158 TYR 159 SER 160 MET 161 THR 162 GLU 163 ASP 164 GLU 165 GLY 166 VAL 167 ARG 168 ASP 169 MET 170 LEU 171 LYS 172 PHE 173 LEU 174 LEU 175 ALA 176 ARG 177 GLU 178 THR 179 GLN 180 HIS 181 GLN 182 LEU 183 GLN 184 PHE 185 MET 186 LYS 187 ALA 188 GLN 189 GLU 190 GLU 191 LEU 192 GLU 193 GLU 194 LYS 195 TYR 196 GLY 197 ILE 198 ILE 199 VAL 200 PRO 201 GLY 202 ASP 203 MET 204 LYS 205 GLU 206 ILE 207 GLU 208 HIS 209 SER 210 GLU 211 PHE 212 SER 213 HIS 214 VAL 215 LEU 216 MET 217 ASN 218 PHE 219 SER 220 ASP 221 GLY 222 ASP 223 GLY 224 SER 225 LYS 226 ALA 227 PHE 228 GLU 229 GLY 230 GLN 231 VAL 232 ALA 233 LYS 234 ASP 235 GLY 236 GLU 237 LYS 238 PHE 239 THR 240 TYR 241 GLN 242 GLU 243 ASN 244 PRO 245 GLU 246 ALA 247 MET 248 GLY 249 GLY 250 ILE 251 PRO 252 HIS 253 ILE 254 LYS 255 PRO 256 GLY 257 ASP 258 PRO 259 ARG 260 LEU 261 HIS 262 ASN 263 HIS 264 GLN 265 GLY 266
Unit 2	MET 1 PHE 2 LYS 3 HIS 4 THR 5 ARG 6 LYS 7 LEU 8 GLN 9 TYR 10 ASN 11 ALA 12 LYS 13 PRO 14 ASP 15 ARG 16 SER 17 ASP 18 PRO 19 ILE 20 MET 21 ALA 22 ARG 23 ARG 24 LEU 25 GLN 26 GLU 27 SER 28 LEU 29 GLY 30 GLY 31 GLN 32 TRP 33 GLY 34 GLU 35 THR 36 THR 37 GLY 38 MET 39 MET 40 SER 41 TYR 42 LEU 43 SER 44 GLN 45 GLY 46 TRP 47 ALA 48 SER 49 THR 50 GLY 51 ALA 52 GLU 53 LYS 54 TYR 55 LYS 56 ASP 57 LEU 58 LEU 59 LEU 60 ASP 61 THR 62 GLY 63 THR 64 GLU 65 GLU 66 MET 67 ALA 68 HIS 69 VAL 70 GLU 71 MET 72 ILE 73 SER 74 THR 75 MET 76 ILE 77 GLY 78 TYR 79 LEU 80 LEU 81 GLU 82 ASP 83 ALA 84 PRO 85 PHE 86 GLY 87 PRO 88 GLU 89 ASP 90 LEU 91 LYS 92 ARG 93 ASP 94 PRO 95 SER 96 LEU 97 ALA 98 THR 99 THR 100 MET 101 ALA 102 GLY 103 MET 104 ASP 105 PRO 106 GLU 107 HIS 108 SER 109 LEU 110 VAL 111 HIS 112 GLY 113 LEU 114 ASN 115 ALA 116 SER 117 LEU 118 ASN 119 ASN 120 PRO 121 ASN 122 GLY 123 ALA 124 ALA 125 TRP 126 ASN 127 ALA 128 GLY 129 TYR 130 VAL 131 THR 132 SER 133 SER 134 GLY 135 ASN 136 LEU 137 VAL 138 ALA 139 ASP 140 MET 141 ARG 142 PHE 143 ASN 144 VAL 145 VAL 146 ARG 147 GLU 148 SER 149 GLU 150 ALA 151 ARG 152 LEU 153 GLN 154 VAL 155 SER 156 ARG 157 LEU 158 TYR 159 SER 160 MET 161 THR 162 GLU 163 ASP 164 GLU 165 GLY 166 VAL 167 ARG 168 ASP 169 MET 170 LEU 171 LYS 172 PHE 173 LEU 174 LEU 175 ALA 176 ARG 177 GLU 178 THR 179 GLN 180 HIS 181 GLN 182 LEU 183 GLN 184 PHE 185 MET 186 LYS 187 ALA 188 GLN 189 GLU 190 GLU 191 LEU 192 GLU 193 GLU 194 LYS 195 TYR 196 GLY 197 ILE 198 ILE 199 VAL 200 PRO 201 GLY 202 ASP 203 MET 204 LYS 205 GLU 206 ILE 207 GLU 208 HIS 209 SER 210 GLU 211 PHE 212 SER 213 HIS 214 VAL 215 LEU 216 MET 217 ASN 218 PHE 219 SER 220 ASP 221 GLY 222 ASP 223 GLY 224 SER 225 LYS 226 ALA 227 PHE 228 GLU 229 GLY 230 GLN 231 VAL 232 ALA 233 LYS 234 ASP 235 GLY 236 GLU 237 LYS 238 PHE 239 THR 240 TYR 241 GLN 242 GLU 243 ASN 244 PRO 245 GLU 246 ALA 247 MET 248 GLY 249 GLY 250 ILE 251 PRO 252 HIS 253 ILE 254 LYS 255 PRO 256 GLY 257 ASP 258 PRO 259 ARG 260 LEU 261 HIS 262 ASN 263 HIS 264 GLN 265 GLY 266
Unit 3	MET 1 PHE 2 LYS 3 HIS 4 THR 5 ARG 6 LYS 7 LEU 8 GLN 9 TYR 10 ASN 11 ALA 12 LYS 13 PRO 14 ASP 15 ARG 16 SER 17 ASP 18 PRO 19 ILE 20 MET 21 ALA 22 ARG 23 ARG 24 LEU 25 GLN 26 GLU 27 SER 28 LEU 29 GLY 30 GLY 31 GLN 32 TRP 33 GLY 34 GLU 35 THR 36 THR 37 GLY 38 MET 39 MET 40 SER 41 TYR 42 LEU 43 SER 44 GLN 45 GLY 46 TRP 47 ALA 48 SER 49 THR 50 GLY 51 ALA 52 GLU 53 LYS 54 TYR 55 LYS 56 ASP 57 LEU 58 LEU 59 LEU 60 ASP 61 THR 62 GLY 63 THR 64 GLU 65 GLU 66 MET 67 ALA 68 HIS 69 VAL 70 GLU 71 MET 72 ILE 73 SER 74 THR 75 MET 76 ILE 77 GLY 78 TYR 79 LEU 80 LEU 81 GLU 82 ASP 83 ALA 84 PRO 85 PHE 86 GLY 87 PRO 88 GLU 89 ASP 90 LEU 91 LYS 92 ARG 93 ASP 94 PRO 95 SER 96 LEU 97 ALA 98 THR 99 THR 100 MET 101 ALA 102 GLY 103 MET 104 ASP 105 PRO 106 GLU 107 HIS 108 SER 109 LEU 110 VAL 111 HIS 112 GLY 113 LEU 114 ASN 115 ALA 116 SER 117 LEU 118 ASN 119 ASN 120 PRO 121 ASN 122 GLY 123 ALA 124 ALA 125 TRP 126 ASN 127 ALA 128 GLY 129 TYR 130 VAL 131 THR 132 SER 133 SER 134 GLY 135 ASN 136 LEU 137 VAL 138 ALA 139 ASP 140 MET 141 ARG 142 PHE 143 ASN 144 VAL 145 VAL 146 ARG 147 GLU 148 SER 149 GLU 150 ALA 151 ARG 152 LEU 153 GLN 154 VAL 155 SER 156 ARG 157 LEU 158 TYR 159 SER 160 MET 161 THR 162 GLU 163 ASP 164 GLU 165 GLY 166 VAL 167 ARG 168 ASP 169 MET 170 LEU 171 LYS 172 PHE 173 LEU 174 LEU 175 ALA 176 ARG 177 GLU 178 THR 179 GLN 180 HIS 181 GLN 182 LEU 183 GLN 184 PHE 185 MET 186 LYS 187 ALA 188 GLN 189 GLU 190 GLU 191 LEU 192 GLU 193 GLU 194 LYS 195 TYR 196 GLY 197 ILE 198 ILE 199 VAL 200 PRO 201 GLY 202 ASP 203 MET 204 LYS 205 GLU 206 ILE 207 GLU 208 HIS 209 SER 210 GLU 211 PHE 212 SER 213 HIS 214 VAL 215 LEU 216 MET 217 ASN 218 PHE 219 SER 220 ASP 221 GLY 222 ASP 223 GLY 224 SER 225 LYS 226 ALA 227 PHE 228 GLU 229 GLY 230 GLN 231 VAL 232 ALA 233 LYS 234 ASP 235 GLY 236 GLU 237 LYS 238 PHE 239 THR 240 TYR 241 GLN 242 GLU 243 ASN 244 PRO 245 GLU 246 ALA 247 MET 248 GLY 249 GLY 250 ILE 251 PRO 252 HIS 253 ILE 254 LYS 255 PRO 256 GLY 257 ASP 258 PRO 259 ARG 260 LEU 261 HIS 262 ASN 263 HIS 264 GLN 265 GLY 266
Unit 4	MET 1 PHE 2 LYS 3 HIS 4 THR 5 ARG 6 LYS 7 LEU 8 GLN 9 TYR 10 ASN 11 ALA 12 LYS 13 PRO 14 ASP 15 ARG 16 SER 17 ASP 18 PRO 19 ILE 20 MET 21 ALA 22 ARG 23 ARG 24 LEU 25 GLN 26 GLU 27 SER 28 LEU 29 GLY 30 GLY 31 GLN 32 TRP 33 GLY 34 GLU 35 THR 36 THR 37 GLY 38 MET 39 MET 40 SER 41 TYR 42 LEU 43 SER 44 GLN 45 GLY 46 TRP 47 ALA 48 SER 49 THR 50 GLY 51 ALA 52 GLU 53 LYS 54 TYR 55 LYS 56 ASP 57 LEU 58 LEU 59 LEU 60 ASP 61 THR 62 GLY 63 THR 64 GLU 65 GLU 66 MET 67 ALA 68 HIS 69 VAL 70 GLU 71 MET 72 ILE 73 SER 74 THR 75 MET 76 ILE 77 GLY 78 TYR 79 LEU 80 LEU 81 GLU 82 ASP 83 ALA 84 PRO 85 PHE 86 GLY 87 PRO 88 GLU 89 ASP 90 LEU 91 LYS 92 ARG 93 ASP 94 PRO 95 SER 96 LEU 97 ALA 98 THR 99 THR 100 MET 101 ALA 102 GLY 103 MET 104 ASP 105 PRO 106 GLU 107 HIS 108 SER 109 LEU 110 VAL 111 HIS 112 GLY 113 LEU 114 ASN 115 ALA 116 SER 117 LEU 118 ASN 119 ASN 120 PRO 121 ASN 122 GLY 123 ALA 124 ALA 125 TRP 126 ASN 127 ALA 128 GLY 129 TYR 130 VAL 131 THR 132 SER 133 SER 134 GLY 135 ASN 136 LEU 137 VAL 138 ALA 139 ASP 140 MET 141 ARG 142 PHE 143 ASN 144 VAL 145 VAL 146 ARG 147 GLU 148 SER 149 GLU 150 ALA 151 ARG 152 LEU 153 GLN 154 VAL 155 SER 156 ARG 157 LEU 158 TYR 159 SER 160 MET 161 THR 162 GLU 163 ASP 164 GLU 165 GLY 166 VAL 167 ARG 168 ASP 169 MET 170 LEU 171 LYS 172 PHE 173 LEU 174 LEU 175 ALA 176 ARG 177 GLU 178 THR 179 GLN 180 HIS 181 GLN 182 LEU 183 GLN 184 PHE 185 MET 186 LYS 187 ALA 188 GLN 189 GLU 190 GLU 191 LEU 192 GLU 193 GLU 194 LYS 195 TYR 196 GLY 197 ILE 198 ILE 199 VAL 200 PRO 201 GLY 202 ASP 203 MET 204 LYS 205 GLU 206 ILE 207 GLU 208 HIS 209 SER 210 GLU 211 PHE 212 SER 213 HIS 214 VAL 215 LEU 216 MET 217 ASN 218 PHE 219 SER 220 ASP 221 GLY 222 ASP 223 GLY 224 SER 225 LYS 226 ALA 227 PHE 228 GLU 229 GLY 230 GLN 231 VAL 232 ALA 233 LYS 234 ASP 235 GLY 236 GLU 237 LYS 238 PHE 239 THR 240 TYR 241 GLN 242 GLU 243 ASN 244 PRO 245 GLU 246 ALA 247 MET 248 GLY 249 GLY 250 ILE 251 PRO 252 HIS 253 ILE 254 LYS 255 PRO 256 GLY 257 ASP 258 PRO 259 ARG 260 LEU 261 HIS 262 ASN 263 HIS 264 GLN 265 GLY 266
Unit 5	MET 1 PHE 2 LYS 3 HIS 4 THR 5 ARG 6 LYS 7 LEU 8 GLN 9 TYR 10 ASN 11 ALA 12 LYS 13 PRO 14 ASP 15 ARG 16 SER 17 ASP 18 PRO 19 ILE 20 MET 21 ALA 22 ARG 23 ARG 24 LEU 25 GLN 26 GLU 27 SER 28 LEU 29 GLY 30 GLY 31 GLN 32 TRP 33 GLY 34 GLU 35 THR 36 THR 37 GLY 38 MET 39 MET 40 SER 41 TYR 42 LEU 43 SER 44 GLN 45 GLY 46 TRP 47 ALA 48 SER 49 THR 50 GLY 51 ALA 52 GLU 53 LYS 54 TYR 55 LYS 56 ASP 57 LEU 58 LEU 59 LEU 60 ASP 61 THR 62 GLY 63 THR 64 GLU 65 GLU 66 MET 67 ALA 68 HIS 69 VAL 70 GLU 71 MET 72 ILE 73 SER 74 THR 75 MET 76 ILE 77 GLY 78 TYR 79 LEU 80 LEU 81 GLU 82 ASP 83 ALA 84 PRO 85 PHE 86 GLY 87 PRO 88 GLU 89 ASP 90 LEU 91 LYS 92 ARG 93 ASP 94 PRO 95 SER 96 LEU 97 ALA 98 THR 99 THR 100 MET 101 ALA 102 GLY 103 MET 104 ASP 105 PRO 106 GLU 107 HIS 108 SER 109 LEU 110 VAL 111 HIS 112 GLY 113 LEU 114 ASN 115 ALA 116 SER 117 LEU 118 ASN 119 ASN 120 PRO 121 ASN 122 GLY 123 ALA 124 ALA 125 TRP 126 ASN 127 ALA 128 GLY 129 TYR 130 VAL 131 THR 132 SER 133 SER 134 GLY 135 ASN 136 LEU 137 VAL 138 ALA 139 ASP 140 MET 141 ARG 142 PHE 143 ASN 144 VAL 145 VAL 146 ARG 147 GLU 148 SER 149 GLU 150 ALA 151 ARG 152 LEU 153 GLN 154 VAL 155 SER 156 ARG 157 LEU 158 TYR 159 SER 160 MET 161 THR 162 GLU 163 ASP 164 GLU 165 GLY 166 VAL 167 ARG 168 ASP 169 MET 170 LEU 171 LYS 172 PHE 173 LEU 174 LEU 175 ALA 176 ARG 177 GLU 178 THR 179 GLN 180 HIS 181 GLN 182 LEU 183 GLN 184 PHE 185 MET 186 LYS 187 ALA 188 GLN 189 GLU 190 GLU 191 LEU 192 GLU 193 GLU 194 LYS 195 TYR 196 GLY 197 ILE 198 ILE 199 VAL 200 PRO 201 GLY 202 ASP 203 MET 204 LYS 205 GLU 206 ILE 207 GLU 208 HIS 209 SER 210 GLU 211 PHE 212 SER 213 HIS 214 VAL 215 LEU 216 MET 217 ASN 218 PHE 219 SER 220 ASP 221 GLY 222 ASP 223 GLY 224 SER 225 LYS 226 ALA 227 PHE 228 GLU 229 GLY 230 GLN 231 VAL 232 ALA 233 LYS 234 ASP 235 GLY 236 GLU 237 LYS 238 PHE 239 THR 240 TYR 241 GLN 242 GLU 243 ASN 244 PRO 245 GLU 246 ALA 247 MET 248 GLY 249 GLY 250 ILE 251 PRO 252 HIS 253 ILE 254 LYS 255 PRO 256 GLY 257 ASP 258 PRO 259 ARG 260 LEU 261 HIS 262 ASN 263 HIS 264 GLN 265 GLY 266
Unit 6	MET 1 PHE 2 LYS 3 HIS 4 THR 5 ARG 6 LYS 7 LEU 8 GLN 9 TYR 10 ASN 11 ALA 12 LYS 13 PRO 14 ASP 15 ARG 16 SER 17 ASP 18 PRO 19 ILE 20 MET 21 ALA 22 ARG 23 ARG 24 LEU 25 GLN 26 GLU 27 SER 28 LEU 29 GLY 30 GLY 31 GLN 32 TRP 33 GLY 34 GLU 35 THR 36 THR 37 GLY 38 MET 39 MET 40 SER 41 TYR 42 LEU 43 SER 44 GLN 45 GLY 46 TRP 47 ALA 48 SER 49 THR 50 GLY 51 ALA 52 GLU 53 LYS 54 TYR 55 LYS 56 ASP 57 LEU 58 LEU 59 LEU 60 ASP 61 THR 62 GLY 63 THR 64 GLU 65 GLU 66 MET 67 ALA 68 HIS 69 VAL 70 GLU 71 MET 72 ILE 73 SER 74 THR 75 MET 76 ILE 77 GLY 78 TYR 79 LEU 80 LEU 81 GLU 82 ASP 83 ALA 84 PRO 85 PHE 86 GLY 87 PRO 88 GLU 89 ASP 90 LEU 91 LYS 92 ARG 93 ASP 94 PRO 95 SER 96 LEU 97 ALA 98 THR 99 THR 100 MET 101 ALA 102 GLY 103 MET 104 ASP 105 PRO 106 GLU 107 HIS 108 SER 109 LEU 110 VAL 111 HIS 112 GLY 113 LEU 114 ASN 115 ALA 116 SER 117 LEU 118 ASN 119 ASN 120 PRO 121 ASN 122 GLY 123 ALA 124 ALA 125 TRP 126 ASN 127 ALA 128 GLY 129 TYR 130 VAL 131 THR 132 SER 133 SER 134 GLY 135 ASN 136 LEU 137 VAL 138 ALA 139 ASP 140 MET 141 ARG 142 PHE 143 ASN 144 VAL 145 VAL 146 ARG 147 GLU 148 SER 149 GLU 150 ALA 151 ARG 152 LEU 153 GLN 154 VAL 155 SER 156 ARG 157 LEU 158 TYR 159 SER 160 MET 161 THR 162 GLU 163 ASP 164 GLU 165 GLY 166 VAL 167 ARG 168 ASP 169 MET 170 LEU 171 LYS 172 PHE 173 LEU 174 LEU 175 ALA 176 ARG 177 GLU 178 THR 179 GLN 180 HIS 181 GLN 182 LEU 183 GLN 184 PHE 185 MET 186 LYS 187 ALA 188 GLN 189 GLU 190 GLU 191 LEU 192 GLU 193 GLU 194 LYS 195 TYR 196 GLY 197 ILE 198 ILE 199 VAL 200 PRO 201 GLY 202 ASP 203 MET 204 LYS 205 GLU 206 ILE 207 GLU 208 HIS 209 SER 210 GLU 211 PHE 212 SER 213 HIS 214 VAL 215 LEU 216 MET 217 ASN 218 PHE 219 SER 220 ASP 221 GLY 222 ASP 223 GLY 224 SER 225 LYS 226 ALA 227 PHE 228 GLU 229 GLY 230 GLN 231 VAL 232 ALA 233 LYS 234 ASP 235 GLY 236 GLU 237 LYS 238 PHE 239 THR 240 TYR 241 GLN 242 GLU 243 ASN 244 PRO 245 GLU 246 ALA 247 MET 248 GLY 249 GLY 250 ILE 251 PRO 252 HIS 253 ILE 254 LYS 255 PRO 256 GLY 257 ASP 258 PRO 259 ARG 260 LEU 261 HIS 262 ASN 263 HIS 264 GLN 265 GLY 266

Ligands

Unit 7	MN3 1267 MN3 1268 OH 1269 OH 1270 OH 1271 CA 1272
Unit 8	MN3 2267 MN3 2268 OH 2269 OH 2270 OH 2271 CA 2272
Unit 9	MN3 3267 MN3 3268 OH 3269 OH 3270 OH 3271 CA 3272
Unit 10	MN3 4267 MN3 4268 OH 4269 OH 4270 OH 4271 CA 4272
Unit 11	MN3 5267 MN3 5268 OH 5269 OH 5270 OH 5271 CA 5272
Unit 12	MN3 6267 MN3 6268 OH 6269 OH 6270 OH 6271 CA 6272