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Title | CRYSTAL STRUCTURE AND SUBSTRATE BINDING MODELING OF THE UROPORPHYRINOGEN-III DECARBOXYLASE FROM NICOTIANA TABACUM: IMPLICATIONS FOR THE CATALYTIC MECHANISM | |
Keywords | BETA BARREL, PLASTIDIAL ENZYME, CRYSTALLOGRAPHIC DIMER, LYASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1J93 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | UROPORPHYRINOGEN DECARBOXYLASE | A | 343 | 2697 | 0 |
2 | Ligand | UROPORPHYRINOGEN DECARBOXYLASE | A | 5 | 0 | 25 |
3 | Water | 231 | 0 | 231 | ||
total | 579 | 2697 | 256 |
Unit 1 | THR10 GLN11 PRO12 LEU13 LEU14 LEU15 ASP16 ALA17 VAL18 ARG19 GLY20 LYS21 GLU22 VAL23 GLU24 ARG25 PRO26 PRO27 VAL28 TRP29 LEU30 MET31 ARG32 GLN33 ALA34 GLY35 ARG36 TYR37 MET38 LYS39 SER40 TYR41 GLN42 LEU43 LEU44 CYS45 GLU46 LYS47 TYR48 PRO49 LEU50 PHE51 ARG52 ASP53 ARG54 SER55 GLU56 ASN57 VAL58 ASP59 LEU60 VAL61 VAL62 GLU63 ILE64 SER65 LEU66 GLN67 PRO68 TRP69 LYS70 VAL71 PHE72 ARG73 PRO74 ASP75 GLY76 VAL77 ILE78 LEU79 PHE80 SER81 ASP82 ILE83 LEU84 THR85 PRO86 LEU87 SER88 GLY89 MET90 ASN91 ILE92 PRO93 PHE94 ASP95 ILE96 ILE97 LYS98 GLY99 LYS100 GLY101 PRO102 VAL103 ILE104 PHE105 ASP106 PRO107 LEU108 ARG109 THR110 ALA111 ALA112 ASP113 VAL114 GLU115 LYS116 VAL117 ARG118 GLU119 PHE120 ILE121 PRO122 GLU123 LYS124 SER125 VAL126 PRO127 TYR128 VAL129 GLY130 GLU131 ALA132 LEU133 THR134 ILE135 LEU136 ARG137 LYS138 GLU139 VAL140 ASN141 ASN142 GLN143 ALA144 ALA145 VAL146 LEU147 GLY148 PHE149 VAL150 GLY151 ALA152 PRO153 PHE154 THR155 LEU156 ALA157 SER158 TYR159 VAL160 VAL161 GLU162 GLY163 GLY164 SER165 SER166 LYS167 ASN168 PHE169 THR170 LYS171 ILE172 LYS173 ARG174 LEU175 ALA176 PHE177 ALA178 GLU179 PRO180 LYS181 VAL182 LEU183 HIS184 ALA185 LEU186 LEU187 GLN188 LYS189 PHE190 ALA191 THR192 SER193 MET194 ALA195 LYS196 TYR197 ILE198 ARG199 TYR200 GLN201 ALA202 ASP203 SER204 GLY205 ALA206 GLN207 ALA208 VAL209 GLN210 ILE211 PHE212 ASP213 SER214 TRP215 ALA216 THR217 GLU218 LEU219 SER220 PRO221 VAL222 ASP223 PHE224 GLU225 GLU226 PHE227 SER228 LEU229 PRO230 TYR231 LEU232 LYS233 GLN234 ILE235 VAL236 ASP237 SER238 VAL239 LYS240 LEU241 THR242 HIS243 PRO244 ASN245 LEU246 PRO247 LEU248 ILE249 LEU250 TYR251 ALA252 SER253 GLY254 SER255 GLY256 GLY257 LEU258 LEU259 GLU260 ARG261 LEU262 PRO263 LEU264 THR265 GLY266 VAL267 ASP268 VAL269 VAL270 SER271 LEU272 ASP273 TRP274 THR275 VAL276 ASP277 MET278 ALA279 ASP280 GLY281 ARG282 ARG283 ARG284 LEU285 GLY286 PRO287 ASN288 VAL289 ALA290 ILE291 GLN292 GLY293 ASN294 VAL295 ASP296 PRO297 GLY298 VAL299 LEU300 PHE301 GLY302 SER303 LYS304 GLU305 PHE306 ILE307 THR308 ASN309 ARG310 ILE311 ASN312 ASP313 THR314 VAL315 LYS316 LYS317 ALA318 GLY319 LYS320 GLY321 LYS322 HIS323 ILE324 LEU325 ASN326 LEU327 GLY328 HIS329 GLY330 ILE331 LYS332 VAL333 GLY334 THR335 PRO336 GLU337 GLU338 ASN339 PHE340 ALA341 HIS342 PHE343 PHE344 GLU345 ILE346 ALA347 LYS348 GLY349 LEU350 ARG351 TYR352 |
Unit 2 | SO4584 SO4585 SO4586 SO4587 SO4588 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |