Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title A STRUCTURAL BASIS FOR THE UNIQUE BINDING FEATURES OF THE HU VITAMIN D-BINDING PROTEIN
Keywords VITAMIN D BINDING, VITAMIN D3 ANALOGUE, GROUP-SPECIFIC COMPO GLOBULIN, TRANSPORT, LIGAND BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1J7E     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   VITAMIN D BINDING PROTEIN  A 435 3385 0
2  Protein   VITAMIN D BINDING PROTEIN  B 447 3419 0
3  Ligand   VITAMIN D BINDING PROTEIN  A 2 0 50
4  Ligand   VITAMIN D BINDING PROTEIN  B 3 0 70
5 Water     246 0 246
total       1133 6804 366
Proteins
Unit 1 TYR7 GLU8 LYS9 ASN10 LYS11 VAL12 CYS13 LYS14 GLU15 PHE16 SER17 HIS18 LEU19 GLY20 LYS21 GLU22 ASP23 PHE24 THR25 SER26 LEU27 SER28 LEU29 VAL30 LEU31 TYR32 SER33 ARG34 LYS35 PHE36 PRO37 SER38 GLY39 THR40 PHE41 GLU42 GLN43 VAL44 SER45 GLN46 LEU47 VAL48 LYS49 GLU50 VAL51 VAL52 SER53 LEU54 THR55 GLU56 ALA57 CYS58 CYS59 ASP69 THR70 ARG71 THR72 SER73 ALA74 LEU75 SER76 ALA77 LYS78 SER79 CYS80 SER84 PRO85 PHE86 PRO87 VAL88 HIS89 PRO90 GLY91 THR92 ALA93 GLU94 CYS95 CYS96 THR97 LYS98 ARG103 LYS104 LEU105 CYS106 MET107 ALA108 ALA109 LEU110 LYS111 HIS112 GLN113 PRO114 GLN115 GLU116 PHE117 PRO118 THR119 TYR120 VAL121 GLU122 PRO123 THR124 ASN125 ASP126 GLU127 ILE128 CYS129 GLU130 ALA131 PHE132 ARG133 LYS134 ASP135 PRO136 LYS137 GLU138 TYR139 ALA140 ASN141 GLN142 PHE143 MET144 TRP145 GLU146 TYR147 SER148 THR149 ASN150 TYR151 GLY152 GLN153 ALA154 PRO155 LEU156 SER157 LEU158 LEU159 VAL160 SER161 TYR162 THR163 LYS164 SER165 TYR166 LEU167 SER168 MET169 VAL170 GLY171 SER172 CYS173 CYS174 THR175 SER176 ALA177 SER178 PRO179 THR180 VAL181 CYS182 PHE183 LEU184 LYS185 GLU186 ARG187 LEU188 GLN189 LEU190 LYS191 HIS192 LEU193 SER194 LEU195 LEU196 THR197 THR198 LEU199 SER200 ASN201 ARG202 VAL203 CYS204 SER205 GLN206 TYR207 ALA208 ALA209 TYR210 GLY211 GLU212 LYS213 LYS214 SER215 ARG216 LEU217 SER218 ASN219 LEU220 ILE221 LYS222 LEU223 ALA224 GLN225 LYS226 VAL227 PRO228 THR229 ALA230 ASP231 LEU232 GLU233 ASP234 VAL235 LEU236 PRO237 LEU238 ALA239 GLU240 ASP241 ILE242 THR243 ASN244 ILE245 LEU246 SER247 LYS248 CYS249 CYS250 GLU251 SER252 ALA253 SER254 GLU255 ASP256 CYS257 MET258 ALA259 LYS260 GLU261 LEU262 PRO263 GLU264 HIS265 THR266 VAL267 LYS268 LEU269 CYS270 ASP271 ASN272 LEU273 SER274 THR275 LYS276 ASN277 SER278 LYS279 PHE280 GLU281 ASP282 CYS283 CYS284 GLN285 GLU286 LYS287 THR288 ALA289 MET290 ASP291 VAL292 PHE293 VAL294 CYS295 THR296 TYR297 PHE298 MET299 PRO300 ALA301 ALA302 GLN303 LEU304 PRO305 GLU306 LEU307 PRO308 ASP309 VAL310 GLU311 LEU312 PRO313 THR314 ASN315 LYS316 ASP317 VAL318 CYS319 ASP320 PRO321 GLY322 ASN323 THR324 LYS325 VAL326 MET327 ASP328 LYS329 TYR330 THR331 PHE332 GLU333 LEU334 SER335 ARG336 ARG337 THR338 HIS339 LEU340 PRO341 GLU342 VAL343 PHE344 LEU345 SER346 LYS347 VAL348 LEU349 GLU350 PRO351 THR352 LEU353 LYS354 SER355 LEU356 GLY357 GLU358 CYS359 CYS360 ASP361 VAL362 GLU363 ASP364 SER365 THR366 THR367 CYS368 PHE369 ASN370 ALA371 LYS372 GLY373 PRO374 LEU375 LEU376 LYS377 LYS378 GLU379 LEU380 SER381 SER382 PHE383 ILE384 ASP385 LYS386 GLY387 GLN388 GLU389 LEU390 CYS391 ALA392 ASP393 TYR394 SER395 GLU396 ASN397 THR398 PHE399 THR400 GLU401 TYR402 LYS403 LYS404 LYS405 LEU406 ALA407 GLU408 ARG409 LEU410 LYS411 ALA412 LYS413 LEU414 PRO415 ASP416 ALA417 THR418 PRO419 THR420 GLU421 LEU422 ALA423 LYS424 LEU425 VAL426 ASN427 LYS428 ARG429 SER430 ASP431 PHE432 ALA433 SER434 ASN435 CYS436 CYS437 SER438 ILE439 ASN440 SER441 PRO442 PRO443 LEU444 TYR445 CYS446 ASP447 SER448 GLU449 ILE450 ASP451 ALA452 GLU453 LEU454 LYS455 ASN456 ILE457
Unit 2 ARG3 GLY4 ARG5 ASP6 TYR7 GLU8 LYS9 ASN10 LYS11 VAL12 CYS13 LYS14 GLU15 PHE16 SER17 HIS18 LEU19 GLY20 LYS21 GLU22 ASP23 PHE24 THR25 SER26 LEU27 SER28 LEU29 VAL30 LEU31 TYR32 SER33 ARG34 LYS35 PHE36 PRO37 SER38 GLY39 THR40 PHE41 GLU42 GLN43 VAL44 SER45 GLN46 LEU47 VAL48 LYS49 GLU50 VAL51 VAL52 SER53 LEU54 THR55 GLU56 ALA57 CYS58 CYS59 ALA60 GLU61 GLY62 ALA63 ASP64 PRO65 ASP66 CYS67 TYR68 ASP69 THR70 ARG71 THR72 SER73 ALA74 LEU75 SER76 ALA77 LYS78 SER79 CYS80 GLU81 SER82 ASN83 SER84 PRO85 PHE86 PRO87 VAL88 HIS89 PRO90 GLY91 THR92 ALA93 GLU94 CYS95 CYS96 THR97 LEU105 CYS106 MET107 ALA108 ALA109 LEU110 LYS111 HIS112 GLN113 PRO114 GLN115 GLU116 PHE117 PRO118 THR119 TYR120 VAL121 GLU122 PRO123 THR124 ASN125 ASP126 GLU127 ILE128 CYS129 GLU130 ALA131 PHE132 ARG133 LYS134 ASP135 PRO136 LYS137 GLU138 TYR139 ALA140 ASN141 GLN142 PHE143 MET144 TRP145 GLU146 TYR147 SER148 THR149 ASN150 TYR151 GLY152 GLN153 ALA154 PRO155 LEU156 SER157 LEU158 LEU159 VAL160 SER161 TYR162 THR163 LYS164 SER165 TYR166 LEU167 SER168 MET169 VAL170 GLY171 SER172 CYS173 CYS174 THR175 SER176 ALA177 SER178 PRO179 THR180 VAL181 CYS182 PHE183 LEU184 LYS185 GLU186 ARG187 LEU188 GLN189 LEU190 LYS191 HIS192 LEU193 SER194 LEU195 LEU196 THR197 THR198 LEU199 SER200 ASN201 ARG202 VAL203 CYS204 SER205 GLN206 TYR207 ALA208 ALA209 TYR210 GLY211 GLU212 LYS213 LYS214 SER215 ARG216 LEU217 SER218 ASN219 LEU220 ILE221 LYS222 LEU223 ALA224 GLN225 LYS226 VAL227 PRO228 THR229 ALA230 ASP231 LEU232 GLU233 ASP234 VAL235 LEU236 PRO237 LEU238 ALA239 GLU240 ASP241 ILE242 THR243 ASN244 ILE245 LEU246 SER247 LYS248 CYS249 CYS250 GLU251 SER252 ALA253 SER254 GLU255 ASP256 CYS257 MET258 ALA259 LYS260 GLU261 LEU262 PRO263 GLU264 HIS265 THR266 VAL267 LYS268 LEU269 CYS270 ASP271 ASN272 LEU273 SER274 THR275 LYS276 ASN277 SER278 LYS279 PHE280 GLU281 ASP282 CYS283 CYS284 GLN285 GLU286 LYS287 THR288 ALA289 MET290 ASP291 VAL292 PHE293 VAL294 CYS295 THR296 TYR297 PHE298 MET299 PRO300 ALA301 ALA302 GLN303 LEU304 PRO305 GLU306 LEU307 PRO308 ASP309 VAL310 GLU311 LEU312 PRO313 THR314 ASN315 LYS316 ASP317 VAL318 CYS319 ASP320 PRO321 GLY322 ASN323 THR324 LYS325 VAL326 MET327 ASP328 LYS329 TYR330 THR331 PHE332 GLU333 LEU334 SER335 ARG336 ARG337 THR338 HIS339 LEU340 PRO341 GLU342 VAL343 PHE344 LEU345 SER346 LYS347 VAL348 LEU349 GLU350 PRO351 THR352 LEU353 LYS354 SER355 LEU356 GLY357 GLU358 CYS359 CYS360 ASP361 VAL362 GLU363 ASP364 SER365 THR366 THR367 CYS368 PHE369 ASN370 ALA371 LYS372 GLY373 PRO374 LEU375 LEU376 LYS377 LYS378 GLU379 LEU380 SER381 SER382 PHE383 ILE384 ASP385 LYS386 GLY387 GLN388 GLU389 LEU390 CYS391 ALA392 ASP393 TYR394 SER395 GLU396 ASN397 THR398 PHE399 THR400 GLU401 TYR402 LYS403 LYS404 LYS405 LEU406 ALA407 GLU408 ARG409 LEU410 LYS411 ALA412 LYS413 LEU414 PRO415 ASP416 ALA417 THR418 PRO419 THR420 GLU421 LEU422 ALA423 LYS424 LEU425 VAL426 ASN427 LYS428 ARG429 SER430 ASP431 PHE432 ALA433 SER434 ASN435 CYS436 CYS437 SER438 ILE439 ASN440 SER441 PRO442 PRO443 LEU444 TYR445 CYS446 ASP447 SER448 GLU449 ILE450 ASP451 ALA452 GLU453 LEU454 LYS455 ASN456
Ligands
Unit 3 JY501 OLA502
Unit 4 JY502 OLA503 OLA504
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany