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Sequence, Chains, Asymmetric and Biological Units

Title TETRAMERIC STRUCTURE OF ALDOLASE FROM THERMUS THERMOPHILUS HB8
Keywords SCHIFF BASE, DEOXYRIBOSE PHOSPAHTE, CARBINOLAMINE, STRUCTURAL GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, LYASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1J2W     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ALDOLASE PROTEIN  A 212 1589 0
2  Protein   ALDOLASE PROTEIN  B 211 1584 0
3  Protein   ALDOLASE PROTEIN  C 212 1589 0
4  Protein   ALDOLASE PROTEIN  D 210 1576 0
5 Water     481 0 481
total       1326 6338 481

Proteins
Unit 1 MET1 ASP2 LEU3 ALA4 ALA5 HIS6 ILE7 ASP8 HIS9 THR10 LEU11 LEU12 LYS13 PRO14 THR15 ALA16 THR17 LEU18 GLU19 GLU20 VAL21 ALA22 LYS23 ALA24 ALA25 GLU26 GLU27 ALA28 LEU29 GLU30 TYR31 GLY32 PHE33 TYR34 GLY35 LEU36 CYS37 ILE38 PRO39 PRO40 SER41 TYR42 VAL43 ALA44 TRP45 VAL46 ARG47 ALA48 ARG49 TYR50 PRO51 HIS52 ALA53 PRO54 PHE55 ARG56 LEU57 VAL58 THR59 VAL60 VAL61 GLY62 PHE63 PRO64 LEU65 GLY66 TYR67 GLN68 GLU69 LYS70 GLU71 VAL72 LYS73 ALA74 LEU75 GLU76 ALA77 ALA78 LEU79 ALA80 CYS81 ALA82 ARG83 GLY84 ALA85 ASP86 GLU87 VAL88 ASP89 MET90 VAL91 LEU92 HIS93 LEU94 GLY95 ARG96 ALA97 LYS98 ALA99 GLY100 ASP101 LEU102 ASP103 TYR104 LEU105 GLU106 ALA107 GLU108 VAL109 ARG110 ALA111 VAL112 ARG113 GLU114 ALA115 VAL116 PRO117 GLN118 ALA119 VAL120 LEU121 LYS122 VAL123 ILE124 LEU125 GLU126 THR127 GLY128 TYR129 PHE130 SER131 PRO132 GLU133 GLU134 ILE135 ALA136 ARG137 LEU138 ALA139 GLU140 ALA141 ALA142 ILE143 ARG144 GLY145 GLY146 ALA147 ASP148 PHE149 LEU150 LYS151 THR152 SER153 THR154 GLY155 PHE156 GLY157 PRO158 ARG159 GLY160 ALA161 SER162 LEU163 GLU164 ASP165 VAL166 ALA167 LEU168 LEU169 VAL170 ARG171 VAL172 ALA173 GLN174 GLY175 ARG176 ALA177 GLN178 VAL179 LYS180 ALA181 ALA182 GLY183 GLY184 ILE185 ARG186 ASP187 ARG188 GLU189 THR190 ALA191 LEU192 ARG193 MET194 LEU195 LYS196 ALA197 GLY198 ALA199 SER200 ARG201 LEU202 GLY203 THR204 SER205 SER206 GLY207 VAL208 ALA209 LEU210 VAL211 ALA212
Unit 2 MET1 ASP2 LEU3 ALA4 ALA5 HIS6 ILE7 ASP8 HIS9 THR10 LEU11 LEU12 LYS13 PRO14 THR15 ALA16 THR17 LEU18 GLU19 GLU20 VAL21 ALA22 LYS23 ALA24 ALA25 GLU26 GLU27 ALA28 LEU29 GLU30 TYR31 GLY32 PHE33 TYR34 GLY35 LEU36 CYS37 ILE38 PRO39 PRO40 SER41 TYR42 VAL43 ALA44 TRP45 VAL46 ARG47 ALA48 ARG49 TYR50 PRO51 HIS52 ALA53 PRO54 PHE55 ARG56 LEU57 VAL58 THR59 VAL60 VAL61 GLY62 PHE63 PRO64 LEU65 GLY66 TYR67 GLN68 GLU69 LYS70 GLU71 VAL72 LYS73 ALA74 LEU75 GLU76 ALA77 ALA78 LEU79 ALA80 CYS81 ALA82 ARG83 GLY84 ALA85 ASP86 GLU87 VAL88 ASP89 MET90 VAL91 LEU92 HIS93 LEU94 GLY95 ARG96 ALA97 LYS98 ALA99 GLY100 ASP101 LEU102 ASP103 TYR104 LEU105 GLU106 ALA107 GLU108 VAL109 ARG110 ALA111 VAL112 ARG113 GLU114 ALA115 VAL116 PRO117 GLN118 ALA119 VAL120 LEU121 LYS122 VAL123 ILE124 LEU125 GLU126 THR127 GLY128 TYR129 PHE130 SER131 PRO132 GLU133 GLU134 ILE135 ALA136 ARG137 LEU138 ALA139 GLU140 ALA141 ALA142 ILE143 ARG144 GLY145 GLY146 ALA147 ASP148 PHE149 LEU150 LYS151 THR152 SER153 THR154 GLY155 PHE156 GLY157 PRO158 ARG159 GLY160 ALA161 SER162 LEU163 GLU164 ASP165 VAL166 ALA167 LEU168 LEU169 VAL170 ARG171 VAL172 ALA173 GLN174 GLY175 ARG176 ALA177 GLN178 VAL179 LYS180 ALA181 ALA182 GLY183 GLY184 ILE185 ARG186 ASP187 ARG188 GLU189 THR190 ALA191 LEU192 ARG193 MET194 LEU195 LYS196 ALA197 GLY198 ALA199 SER200 ARG201 LEU202 GLY203 THR204 SER205 SER206 GLY207 VAL208 ALA209 LEU210 VAL211
Unit 3 MET1 ASP2 LEU3 ALA4 ALA5 HIS6 ILE7 ASP8 HIS9 THR10 LEU11 LEU12 LYS13 PRO14 THR15 ALA16 THR17 LEU18 GLU19 GLU20 VAL21 ALA22 LYS23 ALA24 ALA25 GLU26 GLU27 ALA28 LEU29 GLU30 TYR31 GLY32 PHE33 TYR34 GLY35 LEU36 CYS37 ILE38 PRO39 PRO40 SER41 TYR42 VAL43 ALA44 TRP45 VAL46 ARG47 ALA48 ARG49 TYR50 PRO51 HIS52 ALA53 PRO54 PHE55 ARG56 LEU57 VAL58 THR59 VAL60 VAL61 GLY62 PHE63 PRO64 LEU65 GLY66 TYR67 GLN68 GLU69 LYS70 GLU71 VAL72 LYS73 ALA74 LEU75 GLU76 ALA77 ALA78 LEU79 ALA80 CYS81 ALA82 ARG83 GLY84 ALA85 ASP86 GLU87 VAL88 ASP89 MET90 VAL91 LEU92 HIS93 LEU94 GLY95 ARG96 ALA97 LYS98 ALA99 GLY100 ASP101 LEU102 ASP103 TYR104 LEU105 GLU106 ALA107 GLU108 VAL109 ARG110 ALA111 VAL112 ARG113 GLU114 ALA115 VAL116 PRO117 GLN118 ALA119 VAL120 LEU121 LYS122 VAL123 ILE124 LEU125 GLU126 THR127 GLY128 TYR129 PHE130 SER131 PRO132 GLU133 GLU134 ILE135 ALA136 ARG137 LEU138 ALA139 GLU140 ALA141 ALA142 ILE143 ARG144 GLY145 GLY146 ALA147 ASP148 PHE149 LEU150 LYS151 THR152 SER153 THR154 GLY155 PHE156 GLY157 PRO158 ARG159 GLY160 ALA161 SER162 LEU163 GLU164 ASP165 VAL166 ALA167 LEU168 LEU169 VAL170 ARG171 VAL172 ALA173 GLN174 GLY175 ARG176 ALA177 GLN178 VAL179 LYS180 ALA181 ALA182 GLY183 GLY184 ILE185 ARG186 ASP187 ARG188 GLU189 THR190 ALA191 LEU192 ARG193 MET194 LEU195 LYS196 ALA197 GLY198 ALA199 SER200 ARG201 LEU202 GLY203 THR204 SER205 SER206 GLY207 VAL208 ALA209 LEU210 VAL211 ALA212
Unit 4 ASP2 LEU3 ALA4 ALA5 HIS6 ILE7 ASP8 HIS9 THR10 LEU11 LEU12 LYS13 PRO14 THR15 ALA16 THR17 LEU18 GLU19 GLU20 VAL21 ALA22 LYS23 ALA24 ALA25 GLU26 GLU27 ALA28 LEU29 GLU30 TYR31 GLY32 PHE33 TYR34 GLY35 LEU36 CYS37 ILE38 PRO39 PRO40 SER41 TYR42 VAL43 ALA44 TRP45 VAL46 ARG47 ALA48 ARG49 TYR50 PRO51 HIS52 ALA53 PRO54 PHE55 ARG56 LEU57 VAL58 THR59 VAL60 VAL61 GLY62 PHE63 PRO64 LEU65 GLY66 TYR67 GLN68 GLU69 LYS70 GLU71 VAL72 LYS73 ALA74 LEU75 GLU76 ALA77 ALA78 LEU79 ALA80 CYS81 ALA82 ARG83 GLY84 ALA85 ASP86 GLU87 VAL88 ASP89 MET90 VAL91 LEU92 HIS93 LEU94 GLY95 ARG96 ALA97 LYS98 ALA99 GLY100 ASP101 LEU102 ASP103 TYR104 LEU105 GLU106 ALA107 GLU108 VAL109 ARG110 ALA111 VAL112 ARG113 GLU114 ALA115 VAL116 PRO117 GLN118 ALA119 VAL120 LEU121 LYS122 VAL123 ILE124 LEU125 GLU126 THR127 GLY128 TYR129 PHE130 SER131 PRO132 GLU133 GLU134 ILE135 ALA136 ARG137 LEU138 ALA139 GLU140 ALA141 ALA142 ILE143 ARG144 GLY145 GLY146 ALA147 ASP148 PHE149 LEU150 LYS151 THR152 SER153 THR154 GLY155 PHE156 GLY157 PRO158 ARG159 GLY160 ALA161 SER162 LEU163 GLU164 ASP165 VAL166 ALA167 LEU168 LEU169 VAL170 ARG171 VAL172 ALA173 GLN174 GLY175 ARG176 ALA177 GLN178 VAL179 LYS180 ALA181 ALA182 GLY183 GLY184 ILE185 ARG186 ASP187 ARG188 GLU189 THR190 ALA191 LEU192 ARG193 MET194 LEU195 LYS196 ALA197 GLY198 ALA199 SER200 ARG201 LEU202 GLY203 THR204 SER205 SER206 GLY207 VAL208 ALA209 LEU210 VAL211

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany