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Sequence, Chains, Asymmetric and Biological Units

Title ENZYME-ANALOGUE SUBSTRATE COMPLEX OF PYRIDOXINE 5'-PHOSPHATE
Keywords TIM BARREL, ENZYME-LIGAND COMPLEX, OPEN-CLOSED TRANSITION, BIOSYNTHETIC PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1IXO     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PYRIDOXINE 5'-PHOSPHATE SYNTHASE  A 235 1774 0
2  Protein   PYRIDOXINE 5'-PHOSPHATE SYNTHASE  B 235 1778 0
3  Protein   PYRIDOXINE 5'-PHOSPHATE SYNTHASE  C 235 1770 0
4  Protein   PYRIDOXINE 5'-PHOSPHATE SYNTHASE  D 235 1774 0
5  Ligand   PYRIDOXINE 5'-PHOSPHATE SYNTHASE  A 1 0 10
6  Ligand   PYRIDOXINE 5'-PHOSPHATE SYNTHASE  B 1 0 10
7  Ligand   PYRIDOXINE 5'-PHOSPHATE SYNTHASE  C 2 0 20
8  Ligand   PYRIDOXINE 5'-PHOSPHATE SYNTHASE  D 1 0 10
9 Water     328 0 328
total       1273 7096 378

Proteins
Unit 1 ALA2 GLU3 LEU4 LEU5 LEU6 GLY7 VAL8 ASN9 ILE10 ASP11 HIS12 ILE13 ALA14 THR15 LEU16 ARG17 ASN18 ALA19 ARG20 GLY21 THR22 ALA23 TYR24 PRO25 ASP26 PRO27 VAL28 GLN29 ALA30 ALA31 PHE32 ILE33 ALA34 GLU35 GLN36 ALA37 GLY38 ALA39 ASP40 GLY41 ILE42 THR43 VAL44 HIS45 LEU46 ARG47 GLU48 ASP49 ARG50 ARG51 HIS52 ILE53 THR54 ASP55 ARG56 ASP57 VAL58 ARG59 ILE60 LEU61 ARG62 GLN63 THR64 LEU65 ASP66 THR67 ARG68 MET69 ASN70 LEU71 GLU72 MET73 ALA74 VAL75 THR76 GLU77 GLU78 MET79 LEU80 ALA81 ILE82 ALA83 VAL84 GLU85 THR86 LYS87 PRO88 HIS89 PHE90 CYS91 CYS92 LEU93 VAL94 PRO95 GLU96 GLU104 GLY105 GLY106 LEU107 ASP108 VAL109 ALA110 GLY111 GLN112 ARG113 ASP114 LYS115 MET116 ARG117 ASP118 ALA119 CYS120 LYS121 ARG122 LEU123 ALA124 ASP125 ALA126 GLY127 ILE128 GLN129 VAL130 SER131 LEU132 PHE133 ILE134 ASP135 ALA136 ASP137 GLU138 GLU139 GLN140 ILE141 LYS142 ALA143 ALA144 ALA145 GLU146 VAL147 GLY148 ALA149 PRO150 PHE151 ILE152 GLU153 ILE154 HIS155 THR156 GLY157 CYS158 TYR159 ALA160 ASP161 ALA162 LYS163 THR164 ASP165 ALA166 GLU167 GLN168 ALA169 GLN170 GLU171 LEU172 ALA173 ARG174 ILE175 ALA176 LYS177 ALA178 ALA179 THR180 PHE181 ALA182 ALA183 SER184 LEU185 GLY186 LEU187 LYS188 VAL189 ASN190 ALA191 GLY192 HIS193 GLY194 LEU195 THR196 TYR197 HIS198 ASN199 VAL200 LYS201 ALA202 ILE203 ALA204 ALA205 ILE206 PRO207 GLU208 MET209 HIS210 GLU211 LEU212 ASN213 ILE214 GLY215 HIS216 ALA217 ILE218 ILE219 GLY220 ARG221 ALA222 VAL223 MET224 THR225 GLY226 LEU227 LYS228 ASP229 ALA230 VAL231 ALA232 GLU233 MET234 LYS235 ARG236 LEU237 MET238 LEU239 GLU240 ALA241 ARG242 GLY243
Unit 2 ALA2 GLU3 LEU4 LEU5 LEU6 GLY7 VAL8 ASN9 ILE10 ASP11 HIS12 ILE13 ALA14 THR15 LEU16 ARG17 ASN18 ALA19 ARG20 GLY21 THR22 ALA23 TYR24 PRO25 ASP26 PRO27 VAL28 GLN29 ALA30 ALA31 PHE32 ILE33 ALA34 GLU35 GLN36 ALA37 GLY38 ALA39 ASP40 GLY41 ILE42 THR43 VAL44 HIS45 LEU46 ARG47 GLU48 ASP49 ARG50 ARG51 HIS52 ILE53 THR54 ASP55 ARG56 ASP57 VAL58 ARG59 ILE60 LEU61 ARG62 GLN63 THR64 LEU65 ASP66 THR67 ARG68 MET69 ASN70 LEU71 GLU72 MET73 ALA74 VAL75 THR76 GLU77 GLU78 MET79 LEU80 ALA81 ILE82 ALA83 VAL84 GLU85 THR86 LYS87 PRO88 HIS89 PHE90 CYS91 CYS92 LEU93 VAL94 PRO95 GLU96 GLU104 GLY105 GLY106 LEU107 ASP108 VAL109 ALA110 GLY111 GLN112 ARG113 ASP114 LYS115 MET116 ARG117 ASP118 ALA119 CYS120 LYS121 ARG122 LEU123 ALA124 ASP125 ALA126 GLY127 ILE128 GLN129 VAL130 SER131 LEU132 PHE133 ILE134 ASP135 ALA136 ASP137 GLU138 GLU139 GLN140 ILE141 LYS142 ALA143 ALA144 ALA145 GLU146 VAL147 GLY148 ALA149 PRO150 PHE151 ILE152 GLU153 ILE154 HIS155 THR156 GLY157 CYS158 TYR159 ALA160 ASP161 ALA162 LYS163 THR164 ASP165 ALA166 GLU167 GLN168 ALA169 GLN170 GLU171 LEU172 ALA173 ARG174 ILE175 ALA176 LYS177 ALA178 ALA179 THR180 PHE181 ALA182 ALA183 SER184 LEU185 GLY186 LEU187 LYS188 VAL189 ASN190 ALA191 GLY192 HIS193 GLY194 LEU195 THR196 TYR197 HIS198 ASN199 VAL200 LYS201 ALA202 ILE203 ALA204 ALA205 ILE206 PRO207 GLU208 MET209 HIS210 GLU211 LEU212 ASN213 ILE214 GLY215 HIS216 ALA217 ILE218 ILE219 GLY220 ARG221 ALA222 VAL223 MET224 THR225 GLY226 LEU227 LYS228 ASP229 ALA230 VAL231 ALA232 GLU233 MET234 LYS235 ARG236 LEU237 MET238 LEU239 GLU240 ALA241 ARG242 GLY243
Unit 3 ALA2 GLU3 LEU4 LEU5 LEU6 GLY7 VAL8 ASN9 ILE10 ASP11 HIS12 ILE13 ALA14 THR15 LEU16 ARG17 ASN18 ALA19 ARG20 GLY21 THR22 ALA23 TYR24 PRO25 ASP26 PRO27 VAL28 GLN29 ALA30 ALA31 PHE32 ILE33 ALA34 GLU35 GLN36 ALA37 GLY38 ALA39 ASP40 GLY41 ILE42 THR43 VAL44 HIS45 LEU46 ARG47 GLU48 ASP49 ARG50 ARG51 HIS52 ILE53 THR54 ASP55 ARG56 ASP57 VAL58 ARG59 ILE60 LEU61 ARG62 GLN63 THR64 LEU65 ASP66 THR67 ARG68 MET69 ASN70 LEU71 GLU72 MET73 ALA74 VAL75 THR76 GLU77 GLU78 MET79 LEU80 ALA81 ILE82 ALA83 VAL84 GLU85 THR86 LYS87 PRO88 HIS89 PHE90 CYS91 CYS92 LEU93 VAL94 PRO95 GLU96 GLU104 GLY105 GLY106 LEU107 ASP108 VAL109 ALA110 GLY111 GLN112 ARG113 ASP114 LYS115 MET116 ARG117 ASP118 ALA119 CYS120 LYS121 ARG122 LEU123 ALA124 ASP125 ALA126 GLY127 ILE128 GLN129 VAL130 SER131 LEU132 PHE133 ILE134 ASP135 ALA136 ASP137 GLU138 GLU139 GLN140 ILE141 LYS142 ALA143 ALA144 ALA145 GLU146 VAL147 GLY148 ALA149 PRO150 PHE151 ILE152 GLU153 ILE154 HIS155 THR156 GLY157 CYS158 TYR159 ALA160 ASP161 ALA162 LYS163 THR164 ASP165 ALA166 GLU167 GLN168 ALA169 GLN170 GLU171 LEU172 ALA173 ARG174 ILE175 ALA176 LYS177 ALA178 ALA179 THR180 PHE181 ALA182 ALA183 SER184 LEU185 GLY186 LEU187 LYS188 VAL189 ASN190 ALA191 GLY192 HIS193 GLY194 LEU195 THR196 TYR197 HIS198 ASN199 VAL200 LYS201 ALA202 ILE203 ALA204 ALA205 ILE206 PRO207 GLU208 MET209 HIS210 GLU211 LEU212 ASN213 ILE214 GLY215 HIS216 ALA217 ILE218 ILE219 GLY220 ARG221 ALA222 VAL223 MET224 THR225 GLY226 LEU227 LYS228 ASP229 ALA230 VAL231 ALA232 GLU233 MET234 LYS235 ARG236 LEU237 MET238 LEU239 GLU240 ALA241 ARG242 GLY243
Unit 4 ALA2 GLU3 LEU4 LEU5 LEU6 GLY7 VAL8 ASN9 ILE10 ASP11 HIS12 ILE13 ALA14 THR15 LEU16 ARG17 ASN18 ALA19 ARG20 GLY21 THR22 ALA23 TYR24 PRO25 ASP26 PRO27 VAL28 GLN29 ALA30 ALA31 PHE32 ILE33 ALA34 GLU35 GLN36 ALA37 GLY38 ALA39 ASP40 GLY41 ILE42 THR43 VAL44 HIS45 LEU46 ARG47 GLU48 ASP49 ARG50 ARG51 HIS52 ILE53 THR54 ASP55 ARG56 ASP57 VAL58 ARG59 ILE60 LEU61 ARG62 GLN63 THR64 LEU65 ASP66 THR67 ARG68 MET69 ASN70 LEU71 GLU72 MET73 ALA74 VAL75 THR76 GLU77 GLU78 MET79 LEU80 ALA81 ILE82 ALA83 VAL84 GLU85 THR86 LYS87 PRO88 HIS89 PHE90 CYS91 CYS92 LEU93 VAL94 PRO95 GLU96 GLU104 GLY105 GLY106 LEU107 ASP108 VAL109 ALA110 GLY111 GLN112 ARG113 ASP114 LYS115 MET116 ARG117 ASP118 ALA119 CYS120 LYS121 ARG122 LEU123 ALA124 ASP125 ALA126 GLY127 ILE128 GLN129 VAL130 SER131 LEU132 PHE133 ILE134 ASP135 ALA136 ASP137 GLU138 GLU139 GLN140 ILE141 LYS142 ALA143 ALA144 ALA145 GLU146 VAL147 GLY148 ALA149 PRO150 PHE151 ILE152 GLU153 ILE154 HIS155 THR156 GLY157 CYS158 TYR159 ALA160 ASP161 ALA162 LYS163 THR164 ASP165 ALA166 GLU167 GLN168 ALA169 GLN170 GLU171 LEU172 ALA173 ARG174 ILE175 ALA176 LYS177 ALA178 ALA179 THR180 PHE181 ALA182 ALA183 SER184 LEU185 GLY186 LEU187 LYS188 VAL189 ASN190 ALA191 GLY192 HIS193 GLY194 LEU195 THR196 TYR197 HIS198 ASN199 VAL200 LYS201 ALA202 ILE203 ALA204 ALA205 ILE206 PRO207 GLU208 MET209 HIS210 GLU211 LEU212 ASN213 ILE214 GLY215 HIS216 ALA217 ILE218 ILE219 GLY220 ARG221 ALA222 VAL223 MET224 THR225 GLY226 LEU227 LYS228 ASP229 ALA230 VAL231 ALA232 GLU233 MET234 LYS235 ARG236 LEU237 MET238 LEU239 GLU240 ALA241 ARG242 GLY243

Ligands
Unit 5 G3P1001
Unit 6 G3P1002
Unit 7 G3P1003 G3P1005
Unit 8 G3P1004

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany