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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DI-HEME PEROXIDASE FROM NITROSOMONAS EU
Keywords DI-HEME PEROXIDASE, NITROSOMONAS EUROPAEA, PROTEOBACTERIA, B SUBDIVISION, AMMONIA-OXIDIZING BACTERIA, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1IQC     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DI-HEME PEROXIDASE  A 308 2388 0
2  Protein   DI-HEME PEROXIDASE  B 308 2388 0
3  Protein   DI-HEME PEROXIDASE  C 308 2388 0
4  Protein   DI-HEME PEROXIDASE  D 308 2388 0
5  Ligand   DI-HEME PEROXIDASE  A 5 0 89
6  Ligand   DI-HEME PEROXIDASE  B 4 0 93
7  Ligand   DI-HEME PEROXIDASE  C 3 0 87
8  Ligand   DI-HEME PEROXIDASE  D 4 0 88
9 Water     858 0 858
total       2106 9552 1215
Proteins
Unit 1 ALA1 ASN2 GLU3 PRO4 ILE5 GLN6 PRO7 ILE8 LYS9 ALA10 VAL11 THR12 PRO13 GLU14 ASN15 ALA16 ASP17 MET18 ALA19 GLU20 LEU21 GLY22 LYS23 MET24 LEU25 PHE26 PHE27 ASP28 PRO29 ARG30 LEU31 SER32 LYS33 SER34 GLY35 PHE36 ILE37 SER38 CYS39 ASN40 SER41 CYS42 HIS43 ASN44 LEU45 SER46 MET47 GLY48 GLY49 THR50 ASP51 ASN52 ILE53 THR54 THR55 SER56 ILE57 GLY58 HIS59 LYS60 TRP61 GLN62 GLN63 GLY64 PRO65 ILE66 ASN67 ALA68 PRO69 THR70 VAL71 LEU72 ASN73 SER74 SER75 MET76 ASN77 LEU78 ALA79 GLN80 PHE81 TRP82 ASP83 GLY84 ARG85 ALA86 LYS87 ASP88 LEU89 LYS90 GLU91 GLN92 ALA93 ALA94 GLY95 PRO96 ILE97 ALA98 ASN99 PRO100 LYS101 GLU102 MET103 ALA104 SER105 THR106 HIS107 GLU108 ILE109 ALA110 GLU111 LYS112 VAL113 VAL114 ALA115 SER116 MET117 PRO118 GLN119 TYR120 ARG121 GLU122 ARG123 PHE124 LYS125 LYS126 VAL127 PHE128 GLY129 SER130 ASP131 GLU132 VAL133 THR134 ILE135 ASP136 ARG137 ILE138 THR139 THR140 ALA141 ILE142 ALA143 GLN144 PHE145 GLU146 GLU147 THR148 LEU149 VAL150 THR151 PRO152 GLY153 SER154 LYS155 PHE156 ASP157 LYS158 TRP159 LEU160 GLU161 GLY162 ASP163 LYS164 ASN165 ALA166 LEU167 ASN168 GLN169 ASP170 GLU171 LEU172 GLU173 GLY174 TYR175 ASN176 LEU177 PHE178 LYS179 GLY180 SER181 GLY182 CYS183 VAL184 GLN185 CYS186 HIS187 ASN188 GLY189 PRO190 ALA191 VAL192 GLY193 GLY194 SER195 SER196 TYR197 GLN198 LYS199 MET200 GLY201 VAL202 PHE203 LYS204 PRO205 TYR206 GLU207 THR208 LYS209 ASN210 PRO211 ALA212 ALA213 GLY214 ARG215 MET216 ASP217 VAL218 THR219 GLY220 ASN221 GLU222 ALA223 ASP224 ARG225 ASN226 VAL227 PHE228 LYS229 VAL230 PRO231 THR232 LEU233 ARG234 ASN235 ILE236 GLU237 LEU238 THR239 TYR240 PRO241 TYR242 PHE243 HIS244 ASP245 GLY246 GLY247 ALA248 ALA249 THR250 LEU251 GLU252 GLN253 ALA254 VAL255 GLU256 THR257 MET258 GLY259 ARG260 ILE261 GLN262 LEU263 ASN264 ARG265 GLU266 PHE267 ASN268 LYS269 ASP270 GLU271 VAL272 SER273 LYS274 ILE275 VAL276 ALA277 PHE278 LEU279 LYS280 THR281 LEU282 THR283 GLY284 ASP285 GLN286 PRO287 ASP288 PHE289 LYS290 LEU291 PRO292 ILE293 LEU294 PRO295 PRO296 SER297 ASN298 ASN299 ASP300 THR301 PRO302 ARG303 SER304 GLN305 PRO306 TYR307 GLU308
Unit 2 ALA1 ASN2 GLU3 PRO4 ILE5 GLN6 PRO7 ILE8 LYS9 ALA10 VAL11 THR12 PRO13 GLU14 ASN15 ALA16 ASP17 MET18 ALA19 GLU20 LEU21 GLY22 LYS23 MET24 LEU25 PHE26 PHE27 ASP28 PRO29 ARG30 LEU31 SER32 LYS33 SER34 GLY35 PHE36 ILE37 SER38 CYS39 ASN40 SER41 CYS42 HIS43 ASN44 LEU45 SER46 MET47 GLY48 GLY49 THR50 ASP51 ASN52 ILE53 THR54 THR55 SER56 ILE57 GLY58 HIS59 LYS60 TRP61 GLN62 GLN63 GLY64 PRO65 ILE66 ASN67 ALA68 PRO69 THR70 VAL71 LEU72 ASN73 SER74 SER75 MET76 ASN77 LEU78 ALA79 GLN80 PHE81 TRP82 ASP83 GLY84 ARG85 ALA86 LYS87 ASP88 LEU89 LYS90 GLU91 GLN92 ALA93 ALA94 GLY95 PRO96 ILE97 ALA98 ASN99 PRO100 LYS101 GLU102 MET103 ALA104 SER105 THR106 HIS107 GLU108 ILE109 ALA110 GLU111 LYS112 VAL113 VAL114 ALA115 SER116 MET117 PRO118 GLN119 TYR120 ARG121 GLU122 ARG123 PHE124 LYS125 LYS126 VAL127 PHE128 GLY129 SER130 ASP131 GLU132 VAL133 THR134 ILE135 ASP136 ARG137 ILE138 THR139 THR140 ALA141 ILE142 ALA143 GLN144 PHE145 GLU146 GLU147 THR148 LEU149 VAL150 THR151 PRO152 GLY153 SER154 LYS155 PHE156 ASP157 LYS158 TRP159 LEU160 GLU161 GLY162 ASP163 LYS164 ASN165 ALA166 LEU167 ASN168 GLN169 ASP170 GLU171 LEU172 GLU173 GLY174 TYR175 ASN176 LEU177 PHE178 LYS179 GLY180 SER181 GLY182 CYS183 VAL184 GLN185 CYS186 HIS187 ASN188 GLY189 PRO190 ALA191 VAL192 GLY193 GLY194 SER195 SER196 TYR197 GLN198 LYS199 MET200 GLY201 VAL202 PHE203 LYS204 PRO205 TYR206 GLU207 THR208 LYS209 ASN210 PRO211 ALA212 ALA213 GLY214 ARG215 MET216 ASP217 VAL218 THR219 GLY220 ASN221 GLU222 ALA223 ASP224 ARG225 ASN226 VAL227 PHE228 LYS229 VAL230 PRO231 THR232 LEU233 ARG234 ASN235 ILE236 GLU237 LEU238 THR239 TYR240 PRO241 TYR242 PHE243 HIS244 ASP245 GLY246 GLY247 ALA248 ALA249 THR250 LEU251 GLU252 GLN253 ALA254 VAL255 GLU256 THR257 MET258 GLY259 ARG260 ILE261 GLN262 LEU263 ASN264 ARG265 GLU266 PHE267 ASN268 LYS269 ASP270 GLU271 VAL272 SER273 LYS274 ILE275 VAL276 ALA277 PHE278 LEU279 LYS280 THR281 LEU282 THR283 GLY284 ASP285 GLN286 PRO287 ASP288 PHE289 LYS290 LEU291 PRO292 ILE293 LEU294 PRO295 PRO296 SER297 ASN298 ASN299 ASP300 THR301 PRO302 ARG303 SER304 GLN305 PRO306 TYR307 GLU308
Unit 3 ALA1 ASN2 GLU3 PRO4 ILE5 GLN6 PRO7 ILE8 LYS9 ALA10 VAL11 THR12 PRO13 GLU14 ASN15 ALA16 ASP17 MET18 ALA19 GLU20 LEU21 GLY22 LYS23 MET24 LEU25 PHE26 PHE27 ASP28 PRO29 ARG30 LEU31 SER32 LYS33 SER34 GLY35 PHE36 ILE37 SER38 CYS39 ASN40 SER41 CYS42 HIS43 ASN44 LEU45 SER46 MET47 GLY48 GLY49 THR50 ASP51 ASN52 ILE53 THR54 THR55 SER56 ILE57 GLY58 HIS59 LYS60 TRP61 GLN62 GLN63 GLY64 PRO65 ILE66 ASN67 ALA68 PRO69 THR70 VAL71 LEU72 ASN73 SER74 SER75 MET76 ASN77 LEU78 ALA79 GLN80 PHE81 TRP82 ASP83 GLY84 ARG85 ALA86 LYS87 ASP88 LEU89 LYS90 GLU91 GLN92 ALA93 ALA94 GLY95 PRO96 ILE97 ALA98 ASN99 PRO100 LYS101 GLU102 MET103 ALA104 SER105 THR106 HIS107 GLU108 ILE109 ALA110 GLU111 LYS112 VAL113 VAL114 ALA115 SER116 MET117 PRO118 GLN119 TYR120 ARG121 GLU122 ARG123 PHE124 LYS125 LYS126 VAL127 PHE128 GLY129 SER130 ASP131 GLU132 VAL133 THR134 ILE135 ASP136 ARG137 ILE138 THR139 THR140 ALA141 ILE142 ALA143 GLN144 PHE145 GLU146 GLU147 THR148 LEU149 VAL150 THR151 PRO152 GLY153 SER154 LYS155 PHE156 ASP157 LYS158 TRP159 LEU160 GLU161 GLY162 ASP163 LYS164 ASN165 ALA166 LEU167 ASN168 GLN169 ASP170 GLU171 LEU172 GLU173 GLY174 TYR175 ASN176 LEU177 PHE178 LYS179 GLY180 SER181 GLY182 CYS183 VAL184 GLN185 CYS186 HIS187 ASN188 GLY189 PRO190 ALA191 VAL192 GLY193 GLY194 SER195 SER196 TYR197 GLN198 LYS199 MET200 GLY201 VAL202 PHE203 LYS204 PRO205 TYR206 GLU207 THR208 LYS209 ASN210 PRO211 ALA212 ALA213 GLY214 ARG215 MET216 ASP217 VAL218 THR219 GLY220 ASN221 GLU222 ALA223 ASP224 ARG225 ASN226 VAL227 PHE228 LYS229 VAL230 PRO231 THR232 LEU233 ARG234 ASN235 ILE236 GLU237 LEU238 THR239 TYR240 PRO241 TYR242 PHE243 HIS244 ASP245 GLY246 GLY247 ALA248 ALA249 THR250 LEU251 GLU252 GLN253 ALA254 VAL255 GLU256 THR257 MET258 GLY259 ARG260 ILE261 GLN262 LEU263 ASN264 ARG265 GLU266 PHE267 ASN268 LYS269 ASP270 GLU271 VAL272 SER273 LYS274 ILE275 VAL276 ALA277 PHE278 LEU279 LYS280 THR281 LEU282 THR283 GLY284 ASP285 GLN286 PRO287 ASP288 PHE289 LYS290 LEU291 PRO292 ILE293 LEU294 PRO295 PRO296 SER297 ASN298 ASN299 ASP300 THR301 PRO302 ARG303 SER304 GLN305 PRO306 TYR307 GLU308
Unit 4 ALA1 ASN2 GLU3 PRO4 ILE5 GLN6 PRO7 ILE8 LYS9 ALA10 VAL11 THR12 PRO13 GLU14 ASN15 ALA16 ASP17 MET18 ALA19 GLU20 LEU21 GLY22 LYS23 MET24 LEU25 PHE26 PHE27 ASP28 PRO29 ARG30 LEU31 SER32 LYS33 SER34 GLY35 PHE36 ILE37 SER38 CYS39 ASN40 SER41 CYS42 HIS43 ASN44 LEU45 SER46 MET47 GLY48 GLY49 THR50 ASP51 ASN52 ILE53 THR54 THR55 SER56 ILE57 GLY58 HIS59 LYS60 TRP61 GLN62 GLN63 GLY64 PRO65 ILE66 ASN67 ALA68 PRO69 THR70 VAL71 LEU72 ASN73 SER74 SER75 MET76 ASN77 LEU78 ALA79 GLN80 PHE81 TRP82 ASP83 GLY84 ARG85 ALA86 LYS87 ASP88 LEU89 LYS90 GLU91 GLN92 ALA93 ALA94 GLY95 PRO96 ILE97 ALA98 ASN99 PRO100 LYS101 GLU102 MET103 ALA104 SER105 THR106 HIS107 GLU108 ILE109 ALA110 GLU111 LYS112 VAL113 VAL114 ALA115 SER116 MET117 PRO118 GLN119 TYR120 ARG121 GLU122 ARG123 PHE124 LYS125 LYS126 VAL127 PHE128 GLY129 SER130 ASP131 GLU132 VAL133 THR134 ILE135 ASP136 ARG137 ILE138 THR139 THR140 ALA141 ILE142 ALA143 GLN144 PHE145 GLU146 GLU147 THR148 LEU149 VAL150 THR151 PRO152 GLY153 SER154 LYS155 PHE156 ASP157 LYS158 TRP159 LEU160 GLU161 GLY162 ASP163 LYS164 ASN165 ALA166 LEU167 ASN168 GLN169 ASP170 GLU171 LEU172 GLU173 GLY174 TYR175 ASN176 LEU177 PHE178 LYS179 GLY180 SER181 GLY182 CYS183 VAL184 GLN185 CYS186 HIS187 ASN188 GLY189 PRO190 ALA191 VAL192 GLY193 GLY194 SER195 SER196 TYR197 GLN198 LYS199 MET200 GLY201 VAL202 PHE203 LYS204 PRO205 TYR206 GLU207 THR208 LYS209 ASN210 PRO211 ALA212 ALA213 GLY214 ARG215 MET216 ASP217 VAL218 THR219 GLY220 ASN221 GLU222 ALA223 ASP224 ARG225 ASN226 VAL227 PHE228 LYS229 VAL230 PRO231 THR232 LEU233 ARG234 ASN235 ILE236 GLU237 LEU238 THR239 TYR240 PRO241 TYR242 PHE243 HIS244 ASP245 GLY246 GLY247 ALA248 ALA249 THR250 LEU251 GLU252 GLN253 ALA254 VAL255 GLU256 THR257 MET258 GLY259 ARG260 ILE261 GLN262 LEU263 ASN264 ARG265 GLU266 PHE267 ASN268 LYS269 ASP270 GLU271 VAL272 SER273 LYS274 ILE275 VAL276 ALA277 PHE278 LEU279 LYS280 THR281 LEU282 THR283 GLY284 ASP285 GLN286 PRO287 ASP288 PHE289 LYS290 LEU291 PRO292 ILE293 LEU294 PRO295 PRO296 SER297 ASN298 ASN299 ASP300 THR301 PRO302 ARG303 SER304 GLN305 PRO306 TYR307 GLU308
Ligands
Unit 5 HEC401 HEC402 CA410 CA1411 MG1420
Unit 6 HEC401 HEC402 CA410 GOL1410
Unit 7 HEC401 HEC402 CA410
Unit 8 HEC401 HEC402 CA410 MG2420
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany