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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURES OF RECOMBINANT AND NATIVE SOYBEAN BETA-CO BETA HOMOTRIMERS COMPLEXES WITH N-ACETYL-D-GLUCOSAMINE
Keywords SOYBEAN, STORAGE PROTEIN, VICILIN, SUGAR BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1IPJ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   BETA-CONGLYCININ, BETA CHAIN  A 357 2892 0
2  Protein   BETA-CONGLYCININ, BETA CHAIN  B 363 2952 0
3  Protein   BETA-CONGLYCININ, BETA CHAIN  C 368 2995 0
4  Ligand   BETA-CONGLYCININ, BETA CHAIN  A 1 0 14
5  Ligand   BETA-CONGLYCININ, BETA CHAIN  B 1 0 14
6  Ligand   BETA-CONGLYCININ, BETA CHAIN  C 1 0 14
total       1091 8839 42
Proteins
Unit 1 ASN9 ASN10 PRO11 PHE12 TYR13 LEU14 ARG15 SER16 SER17 ASN18 SER19 PHE20 GLN21 THR22 LEU23 PHE24 GLU25 ASN26 GLN27 ASN28 GLY29 ARG30 ILE31 ARG32 LEU33 LEU34 GLN35 ARG36 PHE37 ASN38 LYS39 ARG40 SER41 PRO42 GLN43 LEU44 GLU45 ASN46 LEU47 ARG48 ASP49 TYR50 ARG51 ILE52 VAL53 GLN54 PHE55 GLN56 SER57 LYS58 PRO59 ASN60 THR61 ILE62 LEU63 LEU64 PRO65 HIS66 HIS67 ALA68 ASP69 ALA70 ASP71 PHE72 LEU73 LEU74 PHE75 VAL76 LEU77 SER78 GLY79 ARG80 ALA81 ILE82 LEU83 THR84 LEU85 VAL86 ASN87 ASN88 ASP89 ASP90 ARG91 ASP92 SER93 TYR94 ASN95 LEU96 HIS97 PRO98 GLY99 ASP100 ALA101 GLN102 ARG103 ILE104 PRO105 ALA106 GLY107 THR108 THR109 TYR110 TYR111 LEU112 VAL113 ASN114 PRO115 HIS116 ASP117 HIS118 GLN119 ASN120 LEU121 LYS122 ILE123 ILE124 LYS125 LEU126 ALA127 ILE128 PRO129 VAL130 ASN131 LYS132 PRO133 GLY134 ARG135 TYR136 ASP137 ASP138 PHE139 PHE140 LEU141 SER142 SER143 THR144 GLN145 ALA146 GLN147 GLN148 SER149 TYR150 LEU151 GLN152 GLY153 PHE154 SER155 HIS156 ASN157 ILE158 LEU159 GLU160 THR161 SER162 PHE163 HIS164 SER165 GLU166 PHE167 GLU168 GLU169 ILE170 ASN171 ARG172 VAL173 LEU174 LEU175 GLY176 GLN183 GLN184 GLU185 GLY186 VAL187 ILE188 VAL189 GLU190 LEU191 SER192 ALA203 LYS204 SER205 SER206 SER207 ARG208 LYS209 THR210 ILE211 SER212 SER213 GLU214 ASP215 GLU216 PRO217 PHE218 ASN219 LEU220 ARG221 SER222 ARG223 ASN224 PRO225 ILE226 TYR227 SER228 ASN229 ASN230 PHE231 GLY232 LYS233 PHE234 PHE235 GLU236 ILE237 THR238 PRO239 GLU240 LYS241 ASN242 PRO243 GLN244 LEU245 ARG246 ASP247 LEU248 ASP249 ILE250 PHE251 LEU252 SER253 SER254 VAL255 ASP256 ILE257 ASN258 GLU259 GLY260 ALA261 LEU262 LEU263 LEU264 PRO265 HIS266 PHE267 ASN268 SER269 LYS270 ALA271 ILE272 VAL273 ILE274 LEU275 VAL276 ILE277 ASN278 GLU279 GLY280 ASP281 ALA282 ASN283 ILE284 GLU285 LEU286 VAL287 GLY288 ILE289 LYS290 LEU303 GLU304 VAL305 GLN306 ARG307 TYR308 ARG309 ALA310 GLU311 LEU312 SER313 GLU314 ASP315 ASP316 VAL317 PHE318 VAL319 ILE320 PRO321 ALA322 ALA323 TYR324 PRO325 PHE326 VAL327 VAL328 ASN329 ALA330 THR331 SER332 ASN333 LEU334 ASN335 PHE336 LEU337 ALA338 PHE339 GLY340 ILE341 ASN342 ALA343 GLU344 ASN345 ASN346 GLN347 ARG348 ASN349 PHE350 LEU351 ALA352 GLY353 GLU354 LYS355 ASP356 ASN357 VAL358 VAL359 ARG360 GLN361 ILE362 GLU363 ARG364 GLN365 VAL366 GLN367 GLU368 LEU369 ALA370 PHE371 PRO372 GLY373 SER374 ALA375 GLN376 ASP377 VAL378 GLU379 ARG380 LEU381 LEU382 LYS383 LYS384 GLN385 ARG386 GLU387 SER388 TYR389 PHE390 VAL391 ASP392 ALA393
Unit 2 ASN9 ASN10 PRO11 PHE12 TYR13 LEU14 ARG15 SER16 SER17 ASN18 SER19 PHE20 GLN21 THR22 LEU23 PHE24 GLU25 ASN26 GLN27 ASN28 GLY29 ARG30 ILE31 ARG32 LEU33 LEU34 GLN35 ARG36 PHE37 ASN38 LYS39 ARG40 SER41 PRO42 GLN43 LEU44 GLU45 ASN46 LEU47 ARG48 ASP49 TYR50 ARG51 ILE52 VAL53 GLN54 PHE55 GLN56 SER57 LYS58 PRO59 ASN60 THR61 ILE62 LEU63 LEU64 PRO65 HIS66 HIS67 ALA68 ASP69 ALA70 ASP71 PHE72 LEU73 LEU74 PHE75 VAL76 LEU77 SER78 GLY79 ARG80 ALA81 ILE82 LEU83 THR84 LEU85 VAL86 ASN87 ASN88 ASP89 ASP90 ARG91 ASP92 SER93 TYR94 ASN95 LEU96 HIS97 PRO98 GLY99 ASP100 ALA101 GLN102 ARG103 ILE104 PRO105 ALA106 GLY107 THR108 THR109 TYR110 TYR111 LEU112 VAL113 ASN114 PRO115 HIS116 ASP117 HIS118 GLN119 ASN120 LEU121 LYS122 ILE123 ILE124 LYS125 LEU126 ALA127 ILE128 PRO129 VAL130 ASN131 LYS132 PRO133 GLY134 ARG135 TYR136 ASP137 ASP138 PHE139 PHE140 LEU141 SER142 SER143 THR144 GLN145 ALA146 GLN147 GLN148 SER149 TYR150 LEU151 GLN152 GLY153 PHE154 SER155 HIS156 ASN157 ILE158 LEU159 GLU160 THR161 SER162 PHE163 HIS164 SER165 GLU166 PHE167 GLU168 GLU169 ILE170 ASN171 ARG172 VAL173 LEU174 LEU175 GLY186 VAL187 ILE188 VAL189 GLU190 LEU191 SER192 LYS193 GLU194 GLN195 ILE196 ARG197 GLN198 LEU199 SER200 ARG201 ARG202 ALA203 LYS204 SER205 SER206 SER207 ARG208 LYS209 THR210 ILE211 SER212 SER213 GLU214 ASP215 GLU216 PRO217 PHE218 ASN219 LEU220 ARG221 SER222 ARG223 ASN224 PRO225 ILE226 TYR227 SER228 ASN229 ASN230 PHE231 GLY232 LYS233 PHE234 PHE235 GLU236 ILE237 THR238 PRO239 GLU240 LYS241 ASN242 PRO243 GLN244 LEU245 ARG246 ASP247 LEU248 ASP249 ILE250 PHE251 LEU252 SER253 SER254 VAL255 ASP256 ILE257 ASN258 GLU259 GLY260 ALA261 LEU262 LEU263 LEU264 PRO265 HIS266 PHE267 ASN268 SER269 LYS270 ALA271 ILE272 VAL273 ILE274 LEU275 VAL276 ILE277 ASN278 GLU279 GLY280 ASP281 ALA282 ASN283 ILE284 GLU285 LEU286 VAL287 GLY288 ILE289 LYS290 LEU303 GLU304 VAL305 GLN306 ARG307 TYR308 ARG309 ALA310 GLU311 LEU312 SER313 GLU314 ASP315 ASP316 VAL317 PHE318 VAL319 ILE320 PRO321 ALA322 ALA323 TYR324 PRO325 PHE326 VAL327 VAL328 ASN329 ALA330 THR331 SER332 ASN333 LEU334 ASN335 PHE336 LEU337 ALA338 PHE339 GLY340 ILE341 ASN342 ALA343 GLU344 ASN345 ASN346 GLN347 ARG348 ASN349 PHE350 LEU351 ALA352 GLY353 GLU354 LYS355 ASP356 ASN357 VAL358 VAL359 ARG360 GLN361 ILE362 GLU363 ARG364 GLN365 VAL366 GLN367 GLU368 LEU369 ALA370 PHE371 PRO372 GLY373 SER374 ALA375 GLN376 ASP377 VAL378 GLU379 ARG380 LEU381 LEU382 LYS383 LYS384 GLN385 ARG386 GLU387 SER388 TYR389 PHE390 VAL391 ASP392 ALA393
Unit 3 ASN9 ASN10 PRO11 PHE12 TYR13 LEU14 ARG15 SER16 SER17 ASN18 SER19 PHE20 GLN21 THR22 LEU23 PHE24 GLU25 ASN26 GLN27 ASN28 GLY29 ARG30 ILE31 ARG32 LEU33 LEU34 GLN35 ARG36 PHE37 ASN38 LYS39 ARG40 SER41 PRO42 GLN43 LEU44 GLU45 ASN46 LEU47 ARG48 ASP49 TYR50 ARG51 ILE52 VAL53 GLN54 PHE55 GLN56 SER57 LYS58 PRO59 ASN60 THR61 ILE62 LEU63 LEU64 PRO65 HIS66 HIS67 ALA68 ASP69 ALA70 ASP71 PHE72 LEU73 LEU74 PHE75 VAL76 LEU77 SER78 GLY79 ARG80 ALA81 ILE82 LEU83 THR84 LEU85 VAL86 ASN87 ASN88 ASP89 ASP90 ARG91 ASP92 SER93 TYR94 ASN95 LEU96 HIS97 PRO98 GLY99 ASP100 ALA101 GLN102 ARG103 ILE104 PRO105 ALA106 GLY107 THR108 THR109 TYR110 TYR111 LEU112 VAL113 ASN114 PRO115 HIS116 ASP117 HIS118 GLN119 ASN120 LEU121 LYS122 ILE123 ILE124 LYS125 LEU126 ALA127 ILE128 PRO129 VAL130 ASN131 LYS132 PRO133 GLY134 ARG135 TYR136 ASP137 ASP138 PHE139 PHE140 LEU141 SER142 SER143 THR144 GLN145 ALA146 GLN147 GLN148 SER149 TYR150 LEU151 GLN152 GLY153 PHE154 SER155 HIS156 ASN157 ILE158 LEU159 GLU160 THR161 SER162 PHE163 HIS164 SER165 GLU166 PHE167 GLU168 GLU169 ILE170 ASN171 ARG172 VAL173 LEU174 LEU175 GLY176 GLU177 GLN181 ARG182 GLN183 GLN184 GLU185 GLY186 VAL187 ILE188 VAL189 GLU190 LEU191 SER192 LYS193 GLU194 GLN195 ILE196 ARG197 GLN198 LEU199 SER200 ARG201 ARG202 ALA203 LYS204 SER205 SER206 SER207 ARG208 LYS209 THR210 ILE211 SER212 SER213 GLU214 ASP215 GLU216 PRO217 PHE218 ASN219 LEU220 ARG221 SER222 ARG223 ASN224 PRO225 ILE226 TYR227 SER228 ASN229 ASN230 PHE231 GLY232 LYS233 PHE234 PHE235 GLU236 ILE237 THR238 PRO239 GLU240 LYS241 ASN242 PRO243 GLN244 LEU245 ARG246 ASP247 LEU248 ASP249 ILE250 PHE251 LEU252 SER253 SER254 VAL255 ASP256 ILE257 ASN258 GLU259 GLY260 ALA261 LEU262 LEU263 LEU264 PRO265 HIS266 PHE267 ASN268 SER269 LYS270 ALA271 ILE272 VAL273 ILE274 LEU275 VAL276 ILE277 ASN278 GLU279 GLY280 ASP281 ALA282 ASN283 ILE284 GLU285 LEU286 VAL287 GLY288 ILE289 GLU304 VAL305 GLN306 ARG307 TYR308 ARG309 ALA310 GLU311 LEU312 SER313 GLU314 ASP315 ASP316 VAL317 PHE318 VAL319 ILE320 PRO321 ALA322 ALA323 TYR324 PRO325 PHE326 VAL327 VAL328 ASN329 ALA330 THR331 SER332 ASN333 LEU334 ASN335 PHE336 LEU337 ALA338 PHE339 GLY340 ILE341 ASN342 ALA343 GLU344 ASN345 ASN346 GLN347 ARG348 ASN349 PHE350 LEU351 ALA352 GLY353 GLU354 LYS355 ASP356 ASN357 VAL358 VAL359 ARG360 GLN361 ILE362 GLU363 ARG364 GLN365 VAL366 GLN367 GLU368 LEU369 ALA370 PHE371 PRO372 GLY373 SER374 ALA375 GLN376 ASP377 VAL378 GLU379 ARG380 LEU381 LEU382 LYS383 LYS384 GLN385 ARG386 GLU387 SER388 TYR389 PHE390 VAL391 ASP392 ALA393
Ligands
Unit 4 NAG902
Unit 5 NAG903
Unit 6 NAG904
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany