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Sequence, Chains, Asymmetric and Biological Units

Title RIBOSOMAL RNAS AND PROTEINS AS WELL AS FACTORS IN THE PRE- TRANSLOCATIONAL STATE
Keywords POSSIBLE INTERACTION BETWEEN SMALL AND LARGE RIBOSOMAL RNAS, MRNA AND TRNAS
Experiment theoretical model
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1IP8     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    A 1288 1277 11
2  DNA    B 23 23 0
3  DNA    C 92 79 13
4  DNA    D 92 79 13
5  DNA    E 894 887 7
6  Protein   NASCENT POLYPEPTIDE  F 18 18 0
7  Protein   RIBOSOMAL PROTEIN L11  G 141 141 0
8  Protein   ELONGATION FACTOR G  H 632 632 0
9  Protein      2 0 4
total       3182 3136 48

Proteins
Unit 6 TYR5001 LYS5002 LYS5003 LYS5004 LYS5005 LYS5006 LYS5007 LYS5008 LYS5009 LYS5010 LYS5011 LYS5012 LYS5013 LYS5014 LYS5015 LYS5016 LYS5017 TYR5018
Unit 7 MET7001 ALA7002 LYS7003 LYS7004 VAL7005 ALA7006 ALA7007 GLN7008 ILE7009 LYS7010 LEU7011 GLN7012 LEU7013 PRO7014 ALA7015 GLY7016 LYS7017 ALA7018 THR7019 PRO7020 ALA7021 PRO7022 PRO7023 VAL7024 GLY7025 PRO7026 ALA7027 LEU7028 GLY7029 GLN7030 HIS7031 GLY7032 VAL7033 ASN7034 ILE7035 MET7036 GLU7037 PHE7038 CYS7039 LYS7040 ARG7041 PHE7042 ASN7043 ALA7044 GLU7045 THR7046 ALA7047 ASP7048 LYS7049 ALA7050 GLY7051 MET7052 ILE7053 LEU7054 PRO7055 VAL7056 VAL7057 ILE7058 THR7059 VAL7060 TYR7061 GLU7062 ASP7063 LYS7064 SER7065 PHE7066 THR7067 PHE7068 ILE7069 ILE7070 LYS7071 THR7072 PRO7073 PRO7074 ALA7075 ALA7076 VAL7077 LEU7078 LEU7079 LYS7080 LYS7081 ALA7082 ALA7083 GLY7084 ILE7085 GLU7086 SER7087 GLY7088 SER7089 GLY7090 GLU7091 PRO7092 ASN7093 ARG7094 ASN7095 LYS7096 VAL7097 ALA7098 THR7099 ILE7100 LYS7101 ARG7102 ASP7103 LYS7104 VAL7105 ARG7106 GLU7107 ILE7108 ALA7109 GLU7110 LEU7111 LYS7112 MET7113 PRO7114 ASP7115 LEU7116 ASN7117 ALA7118 ALA7119 SER7120 ILE7121 GLU7122 ALA7123 ALA7124 MET7125 ARG7126 MET7127 ILE7128 GLU7129 GLY7130 THR7131 ALA7132 ARG7133 SER7134 MET7135 GLY7136 ILE7137 VAL7138 VAL7139 GLU7140 ASP7141
Unit 8 VAL8005 GLU8006 TYR8007 ASP8008 LEU8009 LYS8010 ARG8011 LEU8012 ARG8013 ASN8014 ILE8015 GLY8016 ILE8017 ALA8018 ALA8019 HIS8020 ILE8021 ASP8022 ALA8023 GLY8024 LYS8025 THR8026 THR8027 THR8028 THR8029 GLU8030 ARG8031 ILE8032 LEU8033 TYR8034 TYR8035 THR8036 GLY8037 ARG8038 ILE8039 ALA8068 VAL8069 THR8070 THR8071 CYS8072 PHE8073 TRP8074 LYS8075 ASP8076 HIS8077 ARG8078 ILE8079 ASN8080 ILE8081 ILE8082 ASP8083 THR8084 PRO8085 GLY8086 HIS8087 VAL8088 ASP8089 PHE8090 THR8091 ILE8092 GLU8093 VAL8094 GLU8095 ARG8096 SER8097 MET8098 ARG8099 VAL8100 LEU8101 ASP8102 GLY8103 ALA8104 ILE8105 VAL8106 VAL8107 PHE8108 ASP8109 SER8110 SER8111 GLN8112 GLY8113 VAL8114 GLU8115 PRO8116 GLN8117 SER8118 GLU8119 THR8120 VAL8121 TRP8122 ARG8123 GLN8124 ALA8125 GLU8126 LYS8127 TYR8128 LYS8129 VAL8130 PRO8131 ARG8132 ILE8133 ALA8134 PHE8135 ALA8136 ASN8137 LYS8138 MET8139 ASP8140 LYS8141 THR8142 GLY8143 ALA8144 ASP8145 LEU8146 TRP8147 LEU8148 VAL8149 ILE8150 ARG8151 THR8152 MET8153 GLN8154 GLU8155 ARG8156 LEU8157 GLY8158 ALA8159 ARG8160 PRO8161 VAL8162 VAL8163 MET8164 GLN8165 LEU8166 PRO8167 ILE8168 GLY8169 ARG8170 GLU8171 ASP8172 THR8173 PHE8174 SER8175 GLY8176 ILE8177 ILE8178 ASP8179 VAL8180 LEU8181 ARG8182 MET8183 LYS8184 ALA8185 TYR8186 THR8187 TYR8188 GLY8189 ASN8190 ASP8191 LEU8192 GLY8193 THR8194 ASP8195 ILE8196 ARG8197 GLU8198 ILE8199 PRO8200 ILE8201 PRO8202 GLU8203 GLU8204 TYR8205 LEU8206 ASP8207 GLN8208 ALA8209 ARG8210 GLU8211 TYR8212 HIS8213 GLU8214 LYS8215 LEU8216 VAL8217 GLU8218 VAL8219 ALA8220 ALA8221 ASP8222 PHE8223 ASP8224 GLU8225 ASN8226 ILE8227 MET8228 LEU8229 LYS8230 TYR8231 LEU8232 GLU8233 GLY8234 GLU8235 GLU8236 PRO8237 THR8238 GLU8239 GLU8240 GLU8241 LEU8242 VAL8243 ALA8244 ALA8245 ILE8246 ARG8247 LYS8248 GLY8249 THR8250 ILE8251 ASP8252 LEU8253 LYS8254 ILE8255 THR8256 PRO8257 VAL8258 PHE8259 LEU8260 GLY8261 SER8262 ALA8263 LEU8264 LYS8265 ASN8266 LYS8267 GLY8268 VAL8269 GLN8270 LEU8271 LEU8272 LEU8273 ASP8274 ALA8275 VAL8276 VAL8277 ASP8278 TYR8279 LEU8280 PRO8281 SER8282 PRO8283 LEU8284 ASP8285 ILE8286 PRO8287 PRO8288 ILE8289 LYS8290 GLY8291 THR8292 THR8293 PRO8294 GLU8295 GLY8296 GLU8297 VAL8298 VAL8299 GLU8300 ILE8301 HIS8302 PRO8303 ASP8304 PRO8305 ASN8306 GLY8307 PRO8308 LEU8309 ALA8310 ALA8311 LEU8312 ALA8313 PHE8314 LYS8315 ILE8316 MET8317 ALA8318 ASP8319 PRO8320 TYR8321 VAL8322 GLY8323 ARG8324 LEU8325 THR8326 PHE8327 ILE8328 ARG8329 VAL8330 TYR8331 SER8332 GLY8333 THR8334 LEU8335 THR8336 SER8337 GLY8338 SER8339 TYR8340 VAL8341 TYR8342 ASN8343 THR8344 THR8345 LYS8346 GLY8347 ARG8348 LYS8349 GLU8350 ARG8351 VAL8352 ALA8353 ARG8354 LEU8355 LEU8356 ARG8357 MET8358 HIS8359 ALA8360 ASN8361 HIS8362 ARG8363 GLU8364 GLU8365 VAL8366 GLU8367 GLU8368 LEU8369 LYS8370 ALA8371 GLY8372 ASP8373 LEU8374 GLY8375 ALA8376 VAL8377 VAL8378 GLY8379 LEU8380 LYS8381 GLU8382 THR8383 ILE8384 THR8385 GLY8386 ASP8387 THR8388 LEU8389 VAL8390 GLY8391 GLU8392 ASP8393 ALA8394 PRO8395 ARG8396 VAL8397 ILE8398 LEU8399 ILE8409 ASP8410 VAL8411 ALA8412 ILE8413 GLU8414 PRO8415 LYS8416 SER8425 GLN8426 ALA8427 LEU8428 ALA8429 ARG8430 LEU8431 ALA8432 GLU8433 GLU8434 ASP8435 PRO8436 THR8437 PHE8438 ARG8439 VAL8440 SER8441 THR8442 HIS8443 PRO8444 GLN8448 THR8449 ILE8450 ILE8451 SER8452 GLY8453 MET8454 GLY8455 GLU8456 LEU8457 HIS8458 LEU8459 GLU8460 ILE8461 ILE8462 VAL8463 ASP8464 ARG8465 LEU8466 LYS8467 ARG8468 GLU8469 PHE8470 VAL8476 GLY8477 LYS8478 PRO8479 GLN8480 VAL8481 ALA8482 TYR8483 ARG8484 GLU8485 THR8486 ILE8487 THR8488 LYS8489 PRO8490 VAL8491 ASP8492 VAL8493 GLU8494 GLY8495 LYS8496 PHE8497 ILE8498 ARG8499 GLN8500 THR8501 GLY8502 GLY8503 ARG8504 GLY8505 GLN8506 TYR8507 GLY8508 HIS8509 VAL8510 LYS8511 ILE8512 LYS8513 VAL8514 GLU8515 PRO8516 LEU8517 PRO8518 ARG8519 GLY8520 SER8521 GLY8522 PHE8523 GLU8524 PHE8525 VAL8526 ASN8527 ALA8528 ILE8529 VAL8530 GLY8531 GLY8532 VAL8533 ILE8534 PRO8535 LYS8536 GLU8537 TYR8538 ILE8539 PRO8540 ALA8541 VAL8542 GLN8543 LYS8544 GLY8545 ILE8546 GLU8547 GLU8548 ALA8549 MET8550 GLN8551 SER8552 GLY8553 PRO8554 LEU8555 ILE8556 GLY8557 PHE8558 PRO8559 VAL8560 VAL8561 ASP8562 ILE8563 LYS8564 VAL8565 THR8566 LEU8567 TYR8568 ASP8569 GLY8570 SER8571 TYR8572 HIS8573 GLU8574 VAL8575 ASP8576 SER8577 SER8578 GLU8579 MET8580 ALA8581 PHE8582 LYS8583 ILE8584 ALA8585 GLY8586 SER8587 MET8588 ALA8589 ILE8590 LYS8591 GLU8592 ALA8593 VAL8594 GLN8595 LYS8596 GLY8597 ASP8598 PRO8599 VAL8600 ILE8601 LEU8602 GLU8603 PRO8604 ILE8605 MET8606 ARG8607 VAL8608 GLU8609 VAL8610 THR8611 THR8612 PRO8613 GLU8614 GLU8615 TYR8616 MET8617 GLY8618 ASP8619 VAL8620 ILE8621 GLY8622 ASP8623 LEU8624 ASN8625 ALA8626 ARG8627 ARG8628 GLY8629 GLN8630 ILE8631 LEU8632 GLY8633 MET8634 GLU8635 PRO8636 ARG8637 GLY8638 ASN8639 ALA8640 GLN8641 VAL8642 ILE8643 ARG8644 ALA8645 PHE8646 VAL8647 PRO8648 LEU8649 ALA8650 GLU8651 MET8652 PHE8653 GLY8654 TYR8655 ALA8656 THR8657 ASP8658 LEU8659 ARG8660 SER8661 LYS8662 THR8663 GLN8664 GLY8665 ARG8666 GLY8667 SER8668 PHE8669 VAL8670 MET8671 PHE8672 PHE8673 ASP8674 HIS8675 TYR8676 GLN8677 GLU8678 VAL8679 PRO8680 LYS8681 GLN8682 VAL8683 GLN8684 GLU8685 LYS8686 LEU8687 ILE8688 LYS8689
Unit 9 GTP1000 TYR2000

Nucleic acids
Unit 1 G9 A10 G11 U12 U13 U14 G15 A16 U17 C18 A19 U20 G21 G22 C23 U24 C25 A26 G27 A28 U29 U30 G31 A32 A33 C34 G35 C36 U37 G38 G39 C40 G41 G42 C43 A44 G45 G46 C47 C48 U49 A50 A51 C52 A53 C54 A55 U56 G57 C58 A59 A60 G61 U62 C63 G64 A65 A66 C67 G68 G69 U70 A71 A72 C73 A74 G75 G76 A77 A78 G79 A80 A81 G82 C83 U84 U85 G86 C87 U88 U89 C90 U91 U92 U93 G94 C95 U96 G97 A98 C99 G100 A101 G102 U103 G104 G105 C106 G107 G108 A109 C110 G111 G112 G113 U114 G115 A116 G117 U118 A119 A120 U121 G122 U123 C124 U125 G126 G127 G128 A129 A130 A131 C132 U133 G134 C135 C136 U137 G138 A139 U140 G141 G142 A143 G144 G145 G146 G147 G148 A149 U150 A151 A152 C153 U154 A155 C156 U157 G158 G159 A160 A161 A162 C163 G164 G165 U166 A167 G168 C169 U170 A171 A172 U173 A174 C175 C176 G177 C178 A179 U180 A181 A182 C183 G184 U185 C186 G187 C188 A189 A190 G191 A192 C193 C194 A195 A196 A197 G198 A199 G200 G201 G202 G203 G204 A205 C206 C207 U208 U209 C210 G211 G212 G213 C214 C215 U216 C217 U218 U219 G220 C221 C222 A223 U224 C225 G226 G227 A228 U229 G230 U231 G232 C233 C234 C235 A236 G237 A238 U239 G240 G241 G242 A243 U244 U245 A246 G247 C248 U249 A250 G251 U252 A253 G254 G255 U256 G257 G258 G259 G260 U261 A262 A263 C264 G265 G266 C267 U268 C269 A270 C271 C272 U273 A274 G275 G276 C277 G278 A279 C280 G281 A282 U283 C284 C285 C286 U287 A288 G289 C290 U291 G292 G293 U294 C295 U296 G297 A298 G299 A300 G301 G302 A303 U304 G305 A306 C307 C308 A309 G310 C311 C312 A313 C314 A315 C316 U317 G318 G319 A320 A321 C322 U323 G324 A325 G326 A327 C328 A329 C330 G331 G332 U333 C334 C335 A336 G337 A338 C339 U340 C341 C342 U343 A344 C345 G346 G347 G348 A349 G350 G351 C352 A353 G354 C355 A356 G357 U358 G359 G360 G361 G362 A363 A364 U365 A366 U367 U368 G369 C370 A371 C372 A373 A374 U375 G376 G377 G378 C379 G380 C381 A382 A383 G384 C385 C386 U387 G388 A389 U390 G391 C392 A393 G394 C395 C396 A397 U398 G399 C400 C401 G402 C403 G404 U405 G406 U407 A408 U409 G410 A411 A412 G413 A414 A415 G416 G417 C418 C419 U420 U421 C422 G423 G424 G425 U426 U427 G428 U429 A430 A431 A432 G433 U434 A435 C436 U437 U438 U439 C440 A441 G442 C443 G444 G445 G446 G447 A448 G449 G450 A451 A452 G453 G454 G455 A456 G457 U458 A459 A460 A461 G462 U463 U464 A465 A466 U467 A468 C469 C470 U471 U472 U473 G474 C475 U476 C477 A478 U479 U480 G481 A482 C483 G484 U485 U486 A487 C488 C489 C490 G491 C492 A493 G494 A495 A496 G497 A498 A499 G500 C501 A502 C503 C504 G505 G506 C507 U508 A509 A510 C511 U512 C513 C514 G515 OMU516 G517 C518 C519 A520 G521 C522 A523 G524 C525 C526 7MG527 C528 G529 G530 U531 A532 A533 U534 A535 C536 G537 G538 A539 G540 G541 G542 U543 G544 C545 A546 A547 G548 C549 G550 U551 U552 A553 A554 U555 C556 G557 G558 A559 A560 U561 U562 A563 C564 U565 G566 G567 G568 C569 G654 A655 G656 U657 C658 U659 C660 G661 U662 A663 G664 A665 G666 G667 G668 G669 G670 G671 U672 A673 G674 A675 A676 U677 U678 C679 C680 A681 G682 G683 U684 G685 U686 A687 G688 C689 G690 G691 U692 G693 A694 A695 A696 U697 G698 C699 G700 U701 A702 G703 A704 G705 A706 U707 C708 U709 G710 G711 A712 G713 G714 A715 A716 U717 A718 C719 C720 G721 G722 U723 G724 G725 C726 G727 A728 A729 G730 G731 C732 G733 G734 C735 C736 C737 C738 C739 U740 G741 G742 A743 C744 G745 A746 A747 G748 A749 C750 U751 G752 A768 G769 C770 G771 U772 G773 G774 G775 G776 A777 G778 C779 A780 A781 A782 C783 A784 G785 G786 A787 U788 U789 A790 G791 A792 U793 A794 C795 C796 C797 U798 G799 G800 U801 A802 G803 U804 C805 C806 A807 C808 G809 C810 C811 C880 G881 C882 C883 U884 G885 G886 G887 G888 A889 G890 U891 A892 C893 G894 G895 C896 C897 G898 C899 A900 A901 G902 G903 U904 U905 A906 A907 A908 A909 C910 U911 C912 A913 A914 A915 U916 G917 A918 A919 U920 U921 G922 A923 C924 G925 G926 G927 G928 G929 C930 C931 C932 G933 C934 A935 C936 A937 A938 G939 C940 G941 G942 U943 G944 G945 A946 G947 C948 A949 U950 G951 U952 G953 G954 U955 U956 U957 A958 A959 U960 U961 C962 G963 A964 U965 OMG966 OMC967 A968 A969 C970 G971 C972 G973 A974 A975 G976 A977 A978 C979 C980 U981 U982 A983 C984 C985 U986 G987 G988 U989 C990 U991 U992 G993 A994 C995 A996 U997 C998 C999 A1000 C1001 G1002 G1003 A1004 A1005 G1006 U1007 U1008 U1009 U1010 C1011 A1012 G1013 A1014 G1015 A1016 U1017 G1018 A1019 G1020 A1021 A1022 U1023 G1024 U1025 G1026 C1027 C1028 U1029 U1030 C1031 G1032 G1033 G1034 A1035 A1036 C1037 C1038 G1039 U1040 G1041 A1042 G1043 A1044 C1045 A1046 G1047 G1048 U1049 G1050 C1051 U1052 G1053 C1054 A1055 U1056 G1057 G1058 C1059 U1060 G1061 U1062 C1063 G1064 U1065 C1066 A1067 G1068 C1069 U1070 C1071 G1072 U1073 G1074 U1075 U1076 G1077 U1078 G1079 A1080 A1081 A1082 U1083 G1084 U1085 U1086 G1087 G1088 G1089 U1090 U1091 A1092 A1093 G1094 U1095 C1096 C1097 C1098 G1099 C1100 A1101 A1102 C1103 G1104 A1105 G1106 C1107 G1108 C1109 A1110 A1111 C1112 C1113 C1114 U1115 U1116 A1117 U1118 C1119 C1120 U1121 U1122 U1123 G1124 U1125 U1126 G1127 C1128 C1129 A1130 G1131 C1132 G1133 G1134 U1135 C1136 C1137 G1138 G1139 C1140 C1141 G1142 G1143 G1144 A1145 A1146 C1147 U1148 C1149 A1150 A1151 A1152 G1153 G1154 A1155 G1156 A1157 C1158 U1159 G1160 C1161 C1162 A1163 G1164 U1165 G1166 A1167 U1168 A1169 A1170 A1171 C1172 U1173 G1174 G1175 A1176 G1177 G1178 A1179 A1180 G1181 G1182 U1183 G1184 G1185 G1186 G1187 A1188 U1189 G1190 A1191 C1192 G1193 U1194 C1195 A1196 A1197 G1198 U1199 C1200 A1201 U1202 C1203 A1204 U1205 G1206 OMG1207 C1208 C1209 C1210 U1211 U1212 A1213 C1214 G1215 A1216 C1217 C1218 A1219 G1220 G1221 G1222 C1223 U1224 A1225 C1226 A1227 C1228 A1229 C1230 G1231 U1232 G1233 C1234 U1235 A1236 C1237 A1238 A1239 U1240 G1241 G1242 C1243 G1244 C1245 A1246 U1247 A1248 C1249 A1250 A1251 A1252 G1253 A1254 G1255 A1256 A1257 G1258 C1259 G1260 A1261 C1262 C1263 U1264 C1265 G1266 C1267 G1268 A1269 G1270 A1271 G1272 C1273 A1274 A1275 G1276 C1277 G1278 G1279 A1280 C1281 C1282 U1283 C1284 A1285 U1286 A1287 A1288 A1289 G1290 U1291 G1292 C1293 G1294 U1295 C1296 G1297 U1298 A1299 G1300 U1301 C1302 C1303 G1304 G1305 A1306 U1307 U1308 G1309 G1310 A1311 G1312 U1313 C1314 U1315 G1316 C1317 A1318 A1319 C1320 U1321 C1322 G1323 A1324 C1325 U1326 C1327 C1328 A1329 U1330 G1331 A1332 A1333 G1334 U1335 C1336 G1337 G1338 A1339 A1340 U1341 C1342 G1343 C1344 U1345 A1346 G1347 U1348 A1349 A1350 U1351 C1352 G1353 U1354 G1355 G1356 A1357 U1358 C1359 A1360 G1361 A1362 A1363 U1364 G1365 C1366 C1367 A1368 C1369 G1370 G1371 U1372 G1373 A1374 A1375 U1376 A1377 C1378 G1379 U1380 U1381 C1382 C1383 C1384 G1385 G1386 G1387 C1388 C1389 U1390 U1391 G1392 U1393 A1394 C1395 A1396 C1397 A1398 C1399 C1400 G1401 OMC1402 C1403 C1404 G1405 U1406 OMC1407 A1408 C1409 A1410 U1490 G1491 A1492 A1493 G1494 U1495 C1496 G1497 OMU1498 A1499 A1500 C1501 A1502 A1503 G1504 G1505 U1506 A1507 A1508 C1509 C1510 G1511 U1512 A1513 G1514 G1515 OMG1516 G1517 MA61518 MA61519 C1520 C1521 U1522 G1523 C1524 G1525 G1526 U1527 U1528 G1529 G1530 A1531 U1532 C1533 A1534 C1535 C1536 U1537 C1538 C1539 U1540 U1541 A1542
Unit 2 U1623 U1624 U1625 U1626 U1627 U1628 U1629 U1630 U1631 U1632 U1633 U1634 U1635 U1636 U1637 U1638 U1639 U1640 U1641 U1642 U1643 U1644 U1645
Unit 3 G1801 C1802 G1803 G1804 A1805 U1806 U1807 U1808 A1809 2MG1810 C1811 U1812 C1813 A1814 G1815 H2U1816 H2U1817 G1818 G1819 G1820 A1821 G1822 A1823 G1824 C1825 M2G1826 C1827 C1828 A1829 G1830 A1831 OMC1832 U1833 OMG1834 A1835 A1836 YG1837 A1838 PSU1839 5MC1840 U1841 G1842 G1843 A1844 A1845 U1846 G1847 C1848 G1849 G1850 U1851 C1852 A1853 A1854 A1855 A1856 G1857 C1858 U1859 G1860 C1861 A1862 U1863 C1864 5MC1865 U1866 G1867 U1868 G1869 5MU1870 PSU1871 C1872 G1873 1MA1874 U1875 C1876 C1877 A1878 C1879 A1880 G1881 A1882 A1883 U1884 U1885 C1886 G1887 C1888 A1889 C1890 C1891 A1892
Unit 4 G1901 C1902 G1903 G1904 A1905 U1906 U1907 U1908 A1909 2MG1910 C1911 U1912 C1913 A1914 G1915 H2U1916 H2U1917 G1918 G1919 G1920 A1921 G1922 A1923 G1924 C1925 M2G1926 C1927 C1928 A1929 G1930 A1931 OMC1932 U1933 OMG1934 A1935 A1936 YG1937 A1938 PSU1939 5MC1940 U1941 G1942 G1943 A1944 A1945 U1946 G1947 C1948 G1949 G1950 U1951 C1952 A1953 A1954 A1955 A1956 G1957 C1958 U1959 G1960 C1961 A1962 U1963 C1964 5MC1965 U1966 G1967 U1968 G1969 5MU1970 PSU1971 C1972 G1973 1MA1974 U1975 C1976 C1977 A1978 C1979 A1980 G1981 A1982 A1983 U1984 U1985 C1986 G1987 C1988 A1989 C1990 C1991 A1992
Unit 5 G2406 G2407 G2408 G2409 G2410 G2411 A2412 C2413 C2414 A2415 U2416 C2417 C2418 U2419 C2420 C2421 G2862 A2863 G2864 C2865 A2866 C2867 U2868 G2869 U2870 U2871 U2872 C2873 G2874 G2875 C2876 A2877 A2878 G2879 G2880 G2881 G2882 G2883 U2884 C2885 A2886 U2887 C2888 C2889 C2890 G2891 A2892 C2893 U2894 U2895 A2896 C2897 C2898 A2899 A2900 C2901 C2902 C2903 G2904 A2905 U2906 G2907 C2908 A2909 A2910 A2911 C2912 U2913 G2914 C2915 G3051 C3052 C3053 A3054 G3055 G3056 A3057 U3058 G3059 U3060 U3061 G3062 G3063 C3064 U3065 U3066 A3067 G3068 A3069 A3070 G3071 C3072 A3073 G3074 C3075 C3076 A3077 U3078 C3079 A3080 U3081 U3082 U3083 A3084 A3085 A3086 G3087 A3088 A3089 A3090 G3091 C3092 G3093 U3094 A3095 A3096 U3097 A3098 G3099 C3100 U3101 C3102 A3103 C3104 U3105 G3106 G3107 U3108 A3829 C3830 G3831 C3832 C3833 U3834 G3835 C3836 C3837 C3838 G3839 G3840 U3841 G3842 C3843 C3844 G3845 G3846 A3847 A3848 G3849 G3850 U3851 U3852 A3853 A3854 U3855 U3856 G3857 A3858 U3859 G3860 G3861 G3862 G3863 U3864 U3865 A3866 G3867 C3868 G3869 C3870 A3871 A3872 G3873 C3874 G3875 A3876 A3877 G3878 C3879 U3880 C3881 U3882 U3883 G3884 A3885 U3886 C3887 G3888 A3889 A3890 G3891 C3892 C3893 C3894 C3895 G3896 G3897 U3898 A3899 A3900 A3901 C3902 G3903 G3904 C3905 G3906 G3907 C3908 C3909 G3910 PSU3911 A3912 A3913 C3914 OMU3915 A3916 PSU3917 A3918 A3919 C3920 G3921 G3922 U3923 C3924 C3925 U3926 A3927 A3928 G3929 G3930 U3931 A3932 G3933 C3934 G3935 A3936 A3937 A3938 2MU3939 U3940 C3941 C3942 U3943 U3944 G3945 U3946 C3947 G3948 G3949 G3950 U3951 A3952 A3953 G3954 U3955 U3956 C3957 C3958 G3959 A3960 C3961 OMC3962 U3963 G3964 C3965 A3966 C3967 G3968 A3969 A3970 U3971 G3972 G3973 C3974 G3975 U3976 C4023 G4024 C4025 U4026 G4027 U4028 G4029 A4030 A4031 G4032 A4033 U4034 G4035 C4036 A4037 G4038 U4039 G4040 U4041 A4042 C4043 C4044 C4045 G4046 C4047 G4048 G4049 C4050 A4051 A4052 G4053 A4054 C4055 G4056 G4057 A4058 A4059 A4060 G4061 A4062 C4063 C4064 C4065 C4066 G4067 U4068 G4069 A4070 A4071 C4072 C4073 U4074 U4075 U4076 A4077 C4078 U4079 A4080 U4081 A4082 G4083 C4084 U4085 G4234 G4235 U4236 G4237 G4238 G4239 U4240 A4241 G4242 U4243 U4244 U4245 G4246 A4247 C4248 U4249 G4250 G4251 G4252 G4253 C4254 G4255 G4256 U4257 C4258 U4259 C4260 C4261 U4262 C4263 C4264 U4265 A4266 A4267 A4268 G4269 A4270 G4271 U4272 A4273 A4274 C4275 G4276 G4277 A4278 G4279 G4280 A4281 G4282 C4283 A4284 C4285 G4286 A4287 A4288 G4289 G4290 U4291 U4292 G4293 G4294 C4295 U4296 A4297 A4298 U4299 C4300 C4301 U4302 G4303 G4304 U4305 C4306 G4307 G4308 A4309 C4310 A4311 U4312 C4313 A4314 G4315 G4316 A4317 G4318 G4319 U4320 U4321 A4322 G4323 U4324 G4325 C4326 A4327 A4328 U4329 G4330 G4331 C4332 A4333 U4334 A4335 A4336 G4337 C4338 C4339 A4340 G4341 C4342 U4343 U4344 G4345 A4346 C4347 U4348 G4349 C4350 G4351 A4352 G4353 C4354 G4355 U4356 G4357 A4358 C4359 G4360 G4361 C4362 G4363 C4364 G4365 A4366 G4367 C4368 A4369 G4370 G4371 U4372 G4373 C4374 G4375 A4376 A4377 A4378 G4379 C4380 A4381 G4382 G4383 U4384 C4385 A4386 U4387 A4388 G4389 U4390 G4391 A4392 U4393 C4394 C4395 G4396 G4397 U4398 G4399 G4400 U4401 U4402 C4403 U4404 G4405 A4406 A4407 U4408 G4409 G4410 A4411 A4412 G4413 G4414 G4415 C4416 C4417 A4418 U4419 C4420 G4421 C4422 U4423 C4424 A4425 A4426 C4427 G4428 G4429 A4430 U4431 A4432 A4433 A4434 A4435 G4436 G4437 U4438 A4439 C4440 U4441 C4442 C4443 G4444 G4445 G4446 G4447 A4448 U4449 A4450 A4451 C4452 A4453 G4454 G4455 C4456 U4457 G4458 A4459 U4460 A4461 C4462 C4463 G4464 C4465 C4466 C4467 A4468 A4469 G4470 A4471 G4472 U4473 U4474 C4475 A4476 U4477 A4478 U4479 C4480 G4481 A4482 C4483 G4484 G4485 C4486 G4487 G4488 U4489 G4490 U4491 U4492 U4493 G4494 G4495 C4496 A4497 OMC4498 C4499 U4500 C4501 G4502 A4503 U4504 G4505 U4506 C4507 G4508 G4509 C4510 U4511 C4512 A4513 U4514 C4515 A4516 C4517 A4518 U4519 C4520 C4521 U4522 G4523 G4524 G4525 G4526 C4527 U4528 G4529 A4530 A4531 G4532 U4533 A4534 G4535 G4536 U4537 C4538 C4539 C4540 A4541 A4542 G4543 G4544 G4545 U4546 A4547 U4548 G4549 G4550 C4551 OMU4552 G4553 U4554 U4555 C4556 G4557 C4558 C4559 A4560 U4561 U4562 U4563 A4564 A4565 A4566 G4567 U4568 G4569 G4570 U4571 A4572 C4573 G4574 C4575 G4576 A4577 G4578 C4579 U4580 G4581 G4582 G4583 U4584 U4585 U4586 A4587 G4588 A4589 A4590 C4591 G4592 U4593 C4594 G4595 U4596 G4597 A4598 G4599 A4600 C4601 A4602 G4603 U4604 U4605 C4606 G4607 G4608 U4609 C4610 C4611 C4612 U4613 A4614 U4615 C4616 U4617 G4618 C4619 C4620 G4621 U4622 G4623 G4624 G4625 C4626 G4627 C4628 U4629 G4630 G4631 A4632 G4633 A4634 A4635 C4636 U4637 G4638 A4639 G4640 G4641 G4642 G4643 G4644 G4645 C4646 U4647 G4648 C4649 U4650 C4651 C4652 U4653 A4654 G4655 U4656 A4657 C4658 G4659 A4660 G4661 A4662 G4663 G4664 A4665 C4666 C4667 G4668 G4669 A4670 G4671 U4672 G4673 G4674 A4675 C4676 G4677 C4678 A4679 U4680 C4681 A4682 C4683 U4684 G4685 G4686 U4687 G4688 U4689 U4690 C4691 G4692 G4693 G4694 U4695 U4696 G4697 U4698 C4699 A4700 U4701 G4702 C4703 C4704 A4705 A4706 U4707 G4708 G4709 C4710 A4711 C4712 U4713 G4714 C4715 C4716 C4717 G4718 G4719 U4720 A4721 G4722 C4723 U4724 A4725 A4726 A4727 U4728 G4729 C4730 G4731 G4732 A4733 A4734 G4735 A4736 G4737 A4738 U4739 A4740 A4741 G4742 U4743 G4744 C4745 U4746 G4747 A4748 A4749 A4750 G4751 C4752 A4753 U4754 C4755 U4756 A4757 A4758 G4759 C4760 A4761 C4762 G4763 A4764 A4765 A4766 C4767 U4768 U4769 G4770 C4771 C4772 C4773 C4774 G4775 A4776 G4777 A4778 U4779 G4780 A4781 G4782 U4783 U4784 C4785 U4786 C4787 C4788

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany