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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE ANALYSIS OF NORWALK VIRUS CAPSID
Keywords BETA-BARREL, EF-TU-LIKE DOMAIN CALICIVIRIDAE, T=3 ICOSAHEDRA ICOSAHEDRAL VIRUS, VIRUS
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1IHM     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CAPSID PROTEIN  A 492 3721 0
2  Protein   CAPSID PROTEIN  B 511 3842 0
3  Protein   CAPSID PROTEIN  C 492 3721 0
total       1495 11284 0
Proteins
Unit 1 ASP1029 PRO1030 LEU1031 ALA1032 MET1033 ASP1034 PRO1035 VAL1036 ALA1037 GLY1038 SER1039 SER1040 THR1041 ALA1042 VAL1043 ALA1044 THR1045 ALA1046 GLY1047 GLN1048 VAL1049 ASN1050 PRO1051 ILE1052 ASP1053 PRO1054 TRP1055 ILE1056 ILE1057 ASN1058 ASN1059 PHE1060 VAL1061 GLN1062 ALA1063 PRO1064 GLN1065 GLY1066 GLU1067 PHE1068 THR1069 ILE1070 SER1071 PRO1072 ASN1073 ASN1074 THR1075 PRO1076 GLY1077 ASP1078 VAL1079 LEU1080 PHE1081 ASP1082 LEU1083 SER1084 LEU1085 GLY1086 PRO1087 HIS1088 LEU1089 ASN1090 PRO1091 PHE1092 LEU1093 LEU1094 HIS1095 LEU1096 SER1097 GLN1098 MET1099 TYR1100 ASN1101 GLY1102 TRP1103 VAL1104 GLY1105 ASN1106 MET1107 ARG1108 VAL1109 ARG1110 ILE1111 MET1112 LEU1113 ALA1114 GLY1115 ASN1116 ALA1117 PHE1118 THR1119 ALA1120 GLY1121 LYS1122 ILE1123 ILE1124 VAL1125 SER1126 CYS1127 ILE1128 PRO1129 PRO1130 GLY1131 PHE1132 GLY1133 SER1134 HIS1135 ASN1136 LEU1137 THR1138 ILE1139 ALA1140 GLN1141 ALA1142 THR1143 LEU1144 PHE1145 PRO1146 HIS1147 VAL1148 ILE1149 ALA1150 ASP1151 VAL1152 ARG1153 THR1154 LEU1155 ASP1156 PRO1157 ILE1158 GLU1159 VAL1160 PRO1161 LEU1162 GLU1163 ASP1164 VAL1165 ARG1166 ASN1167 VAL1168 LEU1169 PHE1170 HIS1171 ASN1172 ASN1173 ASP1174 ARG1175 ASN1176 GLN1177 GLN1178 THR1179 MET1180 ARG1181 LEU1182 VAL1183 CYS1184 MET1185 LEU1186 TYR1187 THR1188 PRO1189 LEU1190 ARG1191 THR1192 GLY1193 GLY1194 GLY1195 THR1196 GLY1197 ASP1198 SER1199 PHE1200 VAL1201 VAL1202 ALA1203 GLY1204 ARG1205 VAL1206 MET1207 THR1208 CYS1209 PRO1210 SER1211 PRO1212 ASP1213 PHE1214 ASN1215 PHE1216 LEU1217 PHE1218 LEU1219 VAL1220 PRO1221 PRO1222 THR1223 VAL1224 GLU1225 GLN1226 LYS1227 THR1228 ARG1229 PRO1230 PHE1231 THR1232 LEU1233 PRO1234 ASN1235 LEU1236 PRO1237 LEU1238 SER1239 SER1240 LEU1241 SER1242 ASN1243 SER1244 ARG1245 ALA1246 PRO1247 LEU1248 PRO1249 ILE1250 SER1251 SER1252 MET1253 GLY1254 ILE1255 SER1256 PRO1257 ASP1258 ASN1259 VAL1260 GLN1261 SER1262 VAL1263 GLN1264 PHE1265 GLN1266 ASN1267 GLY1268 ARG1269 CYS1270 THR1271 LEU1272 ASP1273 GLY1274 ARG1275 LEU1276 VAL1277 GLY1278 THR1279 THR1280 PRO1281 VAL1282 SER1283 LEU1284 SER1285 HIS1286 VAL1287 ALA1288 LYS1289 ILE1290 ARG1291 GLY1292 THR1293 SER1294 ASN1295 GLY1296 THR1297 VAL1298 ILE1299 ASN1300 LEU1301 THR1302 GLU1303 LEU1304 ASP1305 GLY1306 THR1307 PRO1308 PHE1309 HIS1310 PRO1311 PHE1312 GLU1313 GLY1314 PRO1315 ALA1316 PRO1317 ILE1318 GLY1319 PHE1320 PRO1321 ASP1322 LEU1323 GLY1324 GLY1325 CYS1326 ASP1327 TRP1328 HIS1329 ILE1330 ASN1331 MET1332 THR1333 GLN1334 PHE1335 GLY1336 HIS1337 SER1338 SER1339 GLN1340 THR1341 GLN1342 TYR1343 ASP1344 VAL1345 ASP1346 THR1347 THR1348 PRO1349 ASP1350 THR1351 PHE1352 VAL1353 PRO1354 HIS1355 LEU1356 GLY1357 SER1358 ILE1359 GLN1360 ALA1361 ASN1362 GLY1363 ILE1364 GLY1365 SER1366 GLY1367 ASN1368 TYR1369 VAL1370 GLY1371 VAL1372 LEU1373 SER1374 TRP1375 ILE1376 SER1377 PRO1378 PRO1379 SER1380 HIS1381 PRO1382 SER1383 GLY1384 SER1385 GLN1386 VAL1387 ASP1388 LEU1389 TRP1390 LYS1391 ILE1392 PRO1393 ASN1394 TYR1395 GLY1396 SER1397 SER1398 ILE1399 THR1400 GLU1401 ALA1402 THR1403 HIS1404 LEU1405 ALA1406 PRO1407 SER1408 VAL1409 TYR1410 PRO1411 PRO1412 GLY1413 PHE1414 GLY1415 GLU1416 VAL1417 LEU1418 VAL1419 PHE1420 PHE1421 MET1422 SER1423 LYS1424 MET1425 PRO1426 GLY1427 PRO1428 GLY1429 ALA1430 TYR1431 ASN1432 LEU1433 PRO1434 CYS1435 LEU1436 LEU1437 PRO1438 GLN1439 GLU1440 TYR1441 ILE1442 SER1443 HIS1444 LEU1445 ALA1446 SER1447 GLU1448 GLN1449 ALA1450 PRO1451 THR1452 VAL1453 GLY1454 GLU1455 ALA1456 ALA1457 LEU1458 LEU1459 HIS1460 TYR1461 VAL1462 ASP1463 PRO1464 ASP1465 THR1466 GLY1467 ARG1468 ASN1469 LEU1470 GLY1471 GLU1472 PHE1473 LYS1474 ALA1475 TYR1476 PRO1477 ASP1478 GLY1479 PHE1480 LEU1481 THR1482 CYS1483 VAL1484 PRO1485 ASN1486 GLY1487 ALA1488 SER1489 SER1490 GLY1491 PRO1492 GLN1493 GLN1494 LEU1495 PRO1496 ILE1497 ASN1498 GLY1499 VAL1500 PHE1501 VAL1502 PHE1503 VAL1504 SER1505 TRP1506 VAL1507 SER1508 ARG1509 PHE1510 TYR1511 GLN1512 LEU1513 LYS1514 PRO1515 VAL1516 GLY1517 THR1518 ALA1519 SER1520
Unit 2 SER2010 SER2011 VAL2012 ASP2013 GLY2014 ALA2015 SER2016 GLY2017 ALA2018 GLY2019 GLN2020 LEU2021 VAL2022 PRO2023 GLU2024 VAL2025 ASN2026 ALA2027 SER2028 ASP2029 PRO2030 LEU2031 ALA2032 MET2033 ASP2034 PRO2035 VAL2036 ALA2037 GLY2038 SER2039 SER2040 THR2041 ALA2042 VAL2043 ALA2044 THR2045 ALA2046 GLY2047 GLN2048 VAL2049 ASN2050 PRO2051 ILE2052 ASP2053 PRO2054 TRP2055 ILE2056 ILE2057 ASN2058 ASN2059 PHE2060 VAL2061 GLN2062 ALA2063 PRO2064 GLN2065 GLY2066 GLU2067 PHE2068 THR2069 ILE2070 SER2071 PRO2072 ASN2073 ASN2074 THR2075 PRO2076 GLY2077 ASP2078 VAL2079 LEU2080 PHE2081 ASP2082 LEU2083 SER2084 LEU2085 GLY2086 PRO2087 HIS2088 LEU2089 ASN2090 PRO2091 PHE2092 LEU2093 LEU2094 HIS2095 LEU2096 SER2097 GLN2098 MET2099 TYR2100 ASN2101 GLY2102 TRP2103 VAL2104 GLY2105 ASN2106 MET2107 ARG2108 VAL2109 ARG2110 ILE2111 MET2112 LEU2113 ALA2114 GLY2115 ASN2116 ALA2117 PHE2118 THR2119 ALA2120 GLY2121 LYS2122 ILE2123 ILE2124 VAL2125 SER2126 CYS2127 ILE2128 PRO2129 PRO2130 GLY2131 PHE2132 GLY2133 SER2134 HIS2135 ASN2136 LEU2137 THR2138 ILE2139 ALA2140 GLN2141 ALA2142 THR2143 LEU2144 PHE2145 PRO2146 HIS2147 VAL2148 ILE2149 ALA2150 ASP2151 VAL2152 ARG2153 THR2154 LEU2155 ASP2156 PRO2157 ILE2158 GLU2159 VAL2160 PRO2161 LEU2162 GLU2163 ASP2164 VAL2165 ARG2166 ASN2167 VAL2168 LEU2169 PHE2170 HIS2171 ASN2172 ASN2173 ASP2174 ARG2175 ASN2176 GLN2177 GLN2178 THR2179 MET2180 ARG2181 LEU2182 VAL2183 CYS2184 MET2185 LEU2186 TYR2187 THR2188 PRO2189 LEU2190 ARG2191 THR2192 GLY2193 GLY2194 GLY2195 THR2196 GLY2197 ASP2198 SER2199 PHE2200 VAL2201 VAL2202 ALA2203 GLY2204 ARG2205 VAL2206 MET2207 THR2208 CYS2209 PRO2210 SER2211 PRO2212 ASP2213 PHE2214 ASN2215 PHE2216 LEU2217 PHE2218 LEU2219 VAL2220 PRO2221 PRO2222 THR2223 VAL2224 GLU2225 GLN2226 LYS2227 THR2228 ARG2229 PRO2230 PHE2231 THR2232 LEU2233 PRO2234 ASN2235 LEU2236 PRO2237 LEU2238 SER2239 SER2240 LEU2241 SER2242 ASN2243 SER2244 ARG2245 ALA2246 PRO2247 LEU2248 PRO2249 ILE2250 SER2251 SER2252 MET2253 GLY2254 ILE2255 SER2256 PRO2257 ASP2258 ASN2259 VAL2260 GLN2261 SER2262 VAL2263 GLN2264 PHE2265 GLN2266 ASN2267 GLY2268 ARG2269 CYS2270 THR2271 LEU2272 ASP2273 GLY2274 ARG2275 LEU2276 VAL2277 GLY2278 THR2279 THR2280 PRO2281 VAL2282 SER2283 LEU2284 SER2285 HIS2286 VAL2287 ALA2288 LYS2289 ILE2290 ARG2291 GLY2292 THR2293 SER2294 ASN2295 GLY2296 THR2297 VAL2298 ILE2299 ASN2300 LEU2301 THR2302 GLU2303 LEU2304 ASP2305 GLY2306 THR2307 PRO2308 PHE2309 HIS2310 PRO2311 PHE2312 GLU2313 GLY2314 PRO2315 ALA2316 PRO2317 ILE2318 GLY2319 PHE2320 PRO2321 ASP2322 LEU2323 GLY2324 GLY2325 CYS2326 ASP2327 TRP2328 HIS2329 ILE2330 ASN2331 MET2332 THR2333 GLN2334 PHE2335 GLY2336 HIS2337 SER2338 SER2339 GLN2340 THR2341 GLN2342 TYR2343 ASP2344 VAL2345 ASP2346 THR2347 THR2348 PRO2349 ASP2350 THR2351 PHE2352 VAL2353 PRO2354 HIS2355 LEU2356 GLY2357 SER2358 ILE2359 GLN2360 ALA2361 ASN2362 GLY2363 ILE2364 GLY2365 SER2366 GLY2367 ASN2368 TYR2369 VAL2370 GLY2371 VAL2372 LEU2373 SER2374 TRP2375 ILE2376 SER2377 PRO2378 PRO2379 SER2380 HIS2381 PRO2382 SER2383 GLY2384 SER2385 GLN2386 VAL2387 ASP2388 LEU2389 TRP2390 LYS2391 ILE2392 PRO2393 ASN2394 TYR2395 GLY2396 SER2397 SER2398 ILE2399 THR2400 GLU2401 ALA2402 THR2403 HIS2404 LEU2405 ALA2406 PRO2407 SER2408 VAL2409 TYR2410 PRO2411 PRO2412 GLY2413 PHE2414 GLY2415 GLU2416 VAL2417 LEU2418 VAL2419 PHE2420 PHE2421 MET2422 SER2423 LYS2424 MET2425 PRO2426 GLY2427 PRO2428 GLY2429 ALA2430 TYR2431 ASN2432 LEU2433 PRO2434 CYS2435 LEU2436 LEU2437 PRO2438 GLN2439 GLU2440 TYR2441 ILE2442 SER2443 HIS2444 LEU2445 ALA2446 SER2447 GLU2448 GLN2449 ALA2450 PRO2451 THR2452 VAL2453 GLY2454 GLU2455 ALA2456 ALA2457 LEU2458 LEU2459 HIS2460 TYR2461 VAL2462 ASP2463 PRO2464 ASP2465 THR2466 GLY2467 ARG2468 ASN2469 LEU2470 GLY2471 GLU2472 PHE2473 LYS2474 ALA2475 TYR2476 PRO2477 ASP2478 GLY2479 PHE2480 LEU2481 THR2482 CYS2483 VAL2484 PRO2485 ASN2486 GLY2487 ALA2488 SER2489 SER2490 GLY2491 PRO2492 GLN2493 GLN2494 LEU2495 PRO2496 ILE2497 ASN2498 GLY2499 VAL2500 PHE2501 VAL2502 PHE2503 VAL2504 SER2505 TRP2506 VAL2507 SER2508 ARG2509 PHE2510 TYR2511 GLN2512 LEU2513 LYS2514 PRO2515 VAL2516 GLY2517 THR2518 ALA2519 SER2520
Unit 3 ASP3029 PRO3030 LEU3031 ALA3032 MET3033 ASP3034 PRO3035 VAL3036 ALA3037 GLY3038 SER3039 SER3040 THR3041 ALA3042 VAL3043 ALA3044 THR3045 ALA3046 GLY3047 GLN3048 VAL3049 ASN3050 PRO3051 ILE3052 ASP3053 PRO3054 TRP3055 ILE3056 ILE3057 ASN3058 ASN3059 PHE3060 VAL3061 GLN3062 ALA3063 PRO3064 GLN3065 GLY3066 GLU3067 PHE3068 THR3069 ILE3070 SER3071 PRO3072 ASN3073 ASN3074 THR3075 PRO3076 GLY3077 ASP3078 VAL3079 LEU3080 PHE3081 ASP3082 LEU3083 SER3084 LEU3085 GLY3086 PRO3087 HIS3088 LEU3089 ASN3090 PRO3091 PHE3092 LEU3093 LEU3094 HIS3095 LEU3096 SER3097 GLN3098 MET3099 TYR3100 ASN3101 GLY3102 TRP3103 VAL3104 GLY3105 ASN3106 MET3107 ARG3108 VAL3109 ARG3110 ILE3111 MET3112 LEU3113 ALA3114 GLY3115 ASN3116 ALA3117 PHE3118 THR3119 ALA3120 GLY3121 LYS3122 ILE3123 ILE3124 VAL3125 SER3126 CYS3127 ILE3128 PRO3129 PRO3130 GLY3131 PHE3132 GLY3133 SER3134 HIS3135 ASN3136 LEU3137 THR3138 ILE3139 ALA3140 GLN3141 ALA3142 THR3143 LEU3144 PHE3145 PRO3146 HIS3147 VAL3148 ILE3149 ALA3150 ASP3151 VAL3152 ARG3153 THR3154 LEU3155 ASP3156 PRO3157 ILE3158 GLU3159 VAL3160 PRO3161 LEU3162 GLU3163 ASP3164 VAL3165 ARG3166 ASN3167 VAL3168 LEU3169 PHE3170 HIS3171 ASN3172 ASN3173 ASP3174 ARG3175 ASN3176 GLN3177 GLN3178 THR3179 MET3180 ARG3181 LEU3182 VAL3183 CYS3184 MET3185 LEU3186 TYR3187 THR3188 PRO3189 LEU3190 ARG3191 THR3192 GLY3193 GLY3194 GLY3195 THR3196 GLY3197 ASP3198 SER3199 PHE3200 VAL3201 VAL3202 ALA3203 GLY3204 ARG3205 VAL3206 MET3207 THR3208 CYS3209 PRO3210 SER3211 PRO3212 ASP3213 PHE3214 ASN3215 PHE3216 LEU3217 PHE3218 LEU3219 VAL3220 PRO3221 PRO3222 THR3223 VAL3224 GLU3225 GLN3226 LYS3227 THR3228 ARG3229 PRO3230 PHE3231 THR3232 LEU3233 PRO3234 ASN3235 LEU3236 PRO3237 LEU3238 SER3239 SER3240 LEU3241 SER3242 ASN3243 SER3244 ARG3245 ALA3246 PRO3247 LEU3248 PRO3249 ILE3250 SER3251 SER3252 MET3253 GLY3254 ILE3255 SER3256 PRO3257 ASP3258 ASN3259 VAL3260 GLN3261 SER3262 VAL3263 GLN3264 PHE3265 GLN3266 ASN3267 GLY3268 ARG3269 CYS3270 THR3271 LEU3272 ASP3273 GLY3274 ARG3275 LEU3276 VAL3277 GLY3278 THR3279 THR3280 PRO3281 VAL3282 SER3283 LEU3284 SER3285 HIS3286 VAL3287 ALA3288 LYS3289 ILE3290 ARG3291 GLY3292 THR3293 SER3294 ASN3295 GLY3296 THR3297 VAL3298 ILE3299 ASN3300 LEU3301 THR3302 GLU3303 LEU3304 ASP3305 GLY3306 THR3307 PRO3308 PHE3309 HIS3310 PRO3311 PHE3312 GLU3313 GLY3314 PRO3315 ALA3316 PRO3317 ILE3318 GLY3319 PHE3320 PRO3321 ASP3322 LEU3323 GLY3324 GLY3325 CYS3326 ASP3327 TRP3328 HIS3329 ILE3330 ASN3331 MET3332 THR3333 GLN3334 PHE3335 GLY3336 HIS3337 SER3338 SER3339 GLN3340 THR3341 GLN3342 TYR3343 ASP3344 VAL3345 ASP3346 THR3347 THR3348 PRO3349 ASP3350 THR3351 PHE3352 VAL3353 PRO3354 HIS3355 LEU3356 GLY3357 SER3358 ILE3359 GLN3360 ALA3361 ASN3362 GLY3363 ILE3364 GLY3365 SER3366 GLY3367 ASN3368 TYR3369 VAL3370 GLY3371 VAL3372 LEU3373 SER3374 TRP3375 ILE3376 SER3377 PRO3378 PRO3379 SER3380 HIS3381 PRO3382 SER3383 GLY3384 SER3385 GLN3386 VAL3387 ASP3388 LEU3389 TRP3390 LYS3391 ILE3392 PRO3393 ASN3394 TYR3395 GLY3396 SER3397 SER3398 ILE3399 THR3400 GLU3401 ALA3402 THR3403 HIS3404 LEU3405 ALA3406 PRO3407 SER3408 VAL3409 TYR3410 PRO3411 PRO3412 GLY3413 PHE3414 GLY3415 GLU3416 VAL3417 LEU3418 VAL3419 PHE3420 PHE3421 MET3422 SER3423 LYS3424 MET3425 PRO3426 GLY3427 PRO3428 GLY3429 ALA3430 TYR3431 ASN3432 LEU3433 PRO3434 CYS3435 LEU3436 LEU3437 PRO3438 GLN3439 GLU3440 TYR3441 ILE3442 SER3443 HIS3444 LEU3445 ALA3446 SER3447 GLU3448 GLN3449 ALA3450 PRO3451 THR3452 VAL3453 GLY3454 GLU3455 ALA3456 ALA3457 LEU3458 LEU3459 HIS3460 TYR3461 VAL3462 ASP3463 PRO3464 ASP3465 THR3466 GLY3467 ARG3468 ASN3469 LEU3470 GLY3471 GLU3472 PHE3473 LYS3474 ALA3475 TYR3476 PRO3477 ASP3478 GLY3479 PHE3480 LEU3481 THR3482 CYS3483 VAL3484 PRO3485 ASN3486 GLY3487 ALA3488 SER3489 SER3490 GLY3491 PRO3492 GLN3493 GLN3494 LEU3495 PRO3496 ILE3497 ASN3498 GLY3499 VAL3500 PHE3501 VAL3502 PHE3503 VAL3504 SER3505 TRP3506 VAL3507 SER3508 ARG3509 PHE3510 TYR3511 GLN3512 LEU3513 LYS3514 PRO3515 VAL3516 GLY3517 THR3518 ALA3519 SER3520
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany