[Image Library Home] | [Helix Analysis Home] | |
[Image Library Entry] | [Analyse Helix] |
Title | SOLUTION STRUCTURE OF THE METHYL-CPG-BINDING DOMAIN OF HUMAN MBD1 IN COMPLEX WITH METHYLATED DNA | |
Keywords | PROTEIN-DNA COMPLEX, ALPHA-BETA, DOUBLE HELIX, RECOGNITION VIA BETA-SHEET, TRANSCRIPTION/DNA COMPLEX | |
Experiment | NMR | |
Number of Models | 20 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1IG4 | released | available | available | Quaternary Structure Server |
NDB | 1IG4 | ||||
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | METHYL-CPG BINDING PROTEIN | A | 75 | 1183 | 0 |
2 | Other macromolecule | 5'-D(*GP*TP*AP*TP*CP*(5CM)P*GP*GP*AP*TP*AP*C)-3' | B | 12 | 350 | 33 |
3 | Other macromolecule | 5'-D(*GP*TP*AP*TP*CP*(5CM)P*GP*GP*AP*TP*AP*C)-3' | C | 12 | 350 | 33 |
total | 99 | 1883 | 66 |
Unit 1 | MET1 ALA2 GLU3 ASP4 TRP5 LEU6 ASP7 CYS8 PRO9 ALA10 LEU11 GLY12 PRO13 GLY14 TRP15 LYS16 ARG17 ARG18 GLU19 VAL20 PHE21 ARG22 LYS23 SER24 GLY25 ALA26 THR27 CYS28 GLY29 ARG30 SER31 ASP32 THR33 TYR34 TYR35 GLN36 SER37 PRO38 THR39 GLY40 ASP41 ARG42 ILE43 ARG44 SER45 LYS46 VAL47 GLU48 LEU49 THR50 ARG51 TYR52 LEU53 GLY54 PRO55 ALA56 CYS57 ASP58 LEU59 THR60 LEU61 PHE62 ASP63 PHE64 LYS65 GLN66 GLY67 ILE68 LEU69 CYS70 TYR71 PRO72 ALA73 PRO74 LYS75 |
Unit 2 | DG101 DT102 DA103 DT104 DC105 5CM106 DG107 DG108 DA109 DT110 DA111 DC112 |
Unit 3 | DG113 DT114 DA115 DT116 DC117 5CM118 DG119 DG120 DA121 DT122 DA123 DC124 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |