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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF L-2-HYDROXYISOCAPROATE DEHYDROGENASE FR LACTOBACILLUS CONFUSUS AT 2.2 ANGSTROMS RESOLUTION-AN EXAMP STRONG ASYMMETRY BETWEEN SUBUNITS
Keywords L-2-HYDROXYCARBOXYLATE DEHYDROGENASE, L-LACTATE DEHYDROGENAS OXIDOREDUCTASE (CHOH(D)-NAD+(A))
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1HYH     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   L-2-HYDROXYISOCAPROATE DEHYDROGENASE  A 297 2216 0
2  Protein   L-2-HYDROXYISOCAPROATE DEHYDROGENASE  B 294 2183 0
3  Protein   L-2-HYDROXYISOCAPROATE DEHYDROGENASE  C 297 2207 0
4  Protein   L-2-HYDROXYISOCAPROATE DEHYDROGENASE  D 297 2205 0
5  Ligand   L-2-HYDROXYISOCAPROATE DEHYDROGENASE  A 2 0 49
6  Ligand   L-2-HYDROXYISOCAPROATE DEHYDROGENASE  B 2 0 49
7  Ligand   L-2-HYDROXYISOCAPROATE DEHYDROGENASE  C 2 0 49
8  Ligand   L-2-HYDROXYISOCAPROATE DEHYDROGENASE  D 2 0 49
9 Water     309 0 309
total       1502 8811 505
Proteins
Unit 1 ALA21 ARG22 LYS23 ILE24 GLY25 ILE26 ILE27 GLY28 LEU29 GLY30 ASN31 VAL32 GLY33 ALA34 ALA35 VAL36 ALA37 HIS38 GLY39 LEU40 ILE41 ALA42 GLN43 GLY44 VAL45 ALA46 ASP47 ASP48 TYR49 VAL50 PHE51 ILE52 ASP53 ALA54 ASN55 GLU56 ALA57 LYS58 VAL59 LYS60 ALA61 ASP62 GLN63 ILE64 ASP65 PHE66 GLN67 ASP68 ALA69 MET70 ALA71 ASN72 LEU73 GLU74 ALA75 HIS76 GLY77 ASN78 ILE79 VAL80 ILE81 ASN82 ASP83 TRP84 ALA85 ALA86 LEU87 ALA88 ASP89 ALA90 ASP91 VAL92 VAL93 ILE94 SER95 THR96 LEU97 GLY98 ASN99 ILE100 LYS101 LEU102 GLN103 GLN104 PHE112 ALA113 GLU114 LEU115 LYS116 PHE117 THR118 SER119 SER120 MET121 VAL122 GLN123 SER124 VAL125 GLY126 THR127 ASN128 LEU129 LYS130 GLU131 SER132 GLY133 PHE134 HIS135 GLY136 VAL137 LEU138 VAL139 VAL140 ILE141 SER142 ASN143 PRO144 VAL145 ASP146 VAL147 ILE148 THR149 ALA150 LEU151 PHE152 GLN153 HIS154 VAL155 THR156 GLY157 PHE158 PRO159 ALA160 HIS161 LYS162 VAL163 ILE164 GLY165 THR166 GLY167 THR168 LEU169 LEU170 ASP171 THR172 ALA173 ARG174 MET175 GLN176 ARG177 ALA178 VAL179 GLY180 GLU181 ALA182 PHE183 ASP184 LEU185 ASP186 PRO187 ARG188 SER189 VAL190 SER191 GLY192 TYR193 ASN194 LEU195 GLY196 GLU197 HIS198 GLY199 ASN200 SER201 GLN202 PHE203 VAL204 ALA205 TRP206 SER207 THR208 VAL209 ARG210 VAL211 MET212 GLY213 GLN214 PRO215 ILE216 VAL217 THR218 LEU219 ILE225 ASP226 LEU227 ALA228 ALA229 ILE230 GLU231 GLU232 GLU233 ALA234 ARG235 LYS236 GLY237 GLY238 PHE239 THR240 VAL241 LEU242 ASN243 GLY244 LYS245 GLY246 TYR247 THR248 SER249 TYR250 GLY251 VAL252 ALA253 THR254 SER255 ALA256 ILE257 ARG258 ILE259 ALA260 LYS261 ALA262 VAL263 MET264 ALA265 ASP266 ALA267 HIS268 ALA269 GLU270 LEU271 VAL272 VAL273 SER274 ASN275 ARG276 ARG277 ASP278 ASP279 MET280 GLY281 MET282 TYR283 LEU284 SER285 TYR286 PRO287 ALA288 ILE289 ILE290 GLY291 ARG292 ASP293 GLY294 VAL295 LEU296 ALA297 GLU298 THR299 THR300 LEU301 ASP302 LEU303 THR304 THR305 ASP306 GLU307 GLN308 GLU309 LYS310 LEU311 LEU312 GLN313 SER314 ARG315 ASP316 TYR317 ILE318 GLN319 GLN320 ARG321 PHE322 ASP323 GLU324 ILE325 VAL326 ASP327 THR328 LEU329
Unit 2 ALA21 ARG22 LYS23 ILE24 GLY25 ILE26 ILE27 GLY28 LEU29 GLY30 ASN31 VAL32 GLY33 ALA34 ALA35 VAL36 ALA37 HIS38 GLY39 LEU40 ILE41 ALA42 GLN43 GLY44 VAL45 ALA46 ASP47 ASP48 TYR49 VAL50 PHE51 ILE52 ASP53 ALA54 ASN55 GLU56 ALA57 LYS58 VAL59 LYS60 ALA61 ASP62 GLN63 ILE64 ASP65 PHE66 GLN67 ASP68 ALA69 MET70 ALA71 ASN72 LEU73 GLU74 ALA75 HIS76 GLY77 ASN78 ILE79 VAL80 ILE81 ASN82 ASP83 TRP84 ALA85 ALA86 LEU87 ALA88 ASP89 ALA90 ASP91 VAL92 VAL93 ILE94 SER95 THR96 LEU97 GLY98 ASN99 ILE100 LYS101 LEU102 GLN103 GLN104 PHE112 ALA113 GLU114 LEU115 LYS116 PHE117 THR118 SER119 SER120 MET121 VAL122 GLN123 SER124 VAL125 GLY126 THR127 ASN128 LEU129 LYS130 GLU131 SER132 GLY133 PHE134 HIS135 GLY136 VAL137 LEU138 VAL139 VAL140 ILE141 SER142 ASN143 PRO144 VAL145 ASP146 VAL147 ILE148 THR149 ALA150 LEU151 PHE152 GLN153 HIS154 VAL155 THR156 GLY157 PHE158 PRO159 ALA160 HIS161 LYS162 VAL163 ILE164 GLY165 THR166 GLY167 THR168 LEU169 LEU170 ASP171 THR172 ALA173 ARG174 MET175 GLN176 ARG177 ALA178 VAL179 GLY180 GLU181 ALA182 PHE183 ASP184 LEU185 ASP186 PRO187 ARG188 SER189 VAL190 SER191 GLY192 TYR193 ASN194 LEU195 GLY196 GLU197 HIS198 GLY199 ASN200 SER201 GLN202 PHE203 VAL204 ALA205 TRP206 SER207 THR208 VAL209 ARG210 VAL211 MET212 GLY213 GLN214 PRO215 ILE216 VAL217 THR218 LEU219 ILE225 ASP226 LEU227 ALA228 ALA229 ILE230 GLU231 GLU232 GLU233 ALA234 ARG235 LYS236 GLY237 GLY238 PHE239 THR240 VAL241 LEU242 ASN243 GLY244 LYS245 GLY246 TYR247 THR248 SER249 TYR250 GLY251 VAL252 ALA253 THR254 SER255 ALA256 ILE257 ARG258 ILE259 ALA260 LYS261 ALA262 VAL263 MET264 ALA265 ASP266 ALA267 HIS268 ALA269 GLU270 LEU271 VAL272 VAL273 SER274 ASN275 ARG276 ARG277 ASP278 ASP279 MET280 GLY281 MET282 TYR283 LEU284 SER285 TYR286 PRO287 ALA288 ILE289 ILE290 GLY291 ARG292 ASP293 GLY294 VAL295 LEU296 ALA297 GLU298 THR299 THR300 LEU301 ASP302 LEU303 THR304 THR305 ASP306 GLU307 GLN308 GLU309 LYS310 LEU311 LEU312 GLN313 SER314 ARG315 ASP316 TYR317 ILE318 GLN319 GLN320 ARG321 PHE322 ASP323 GLU324 ILE325 VAL326
Unit 3 ALA21 ARG22 LYS23 ILE24 GLY25 ILE26 ILE27 GLY28 LEU29 GLY30 ASN31 VAL32 GLY33 ALA34 ALA35 VAL36 ALA37 HIS38 GLY39 LEU40 ILE41 ALA42 GLN43 GLY44 VAL45 ALA46 ASP47 ASP48 TYR49 VAL50 PHE51 ILE52 ASP53 ALA54 ASN55 GLU56 ALA57 LYS58 VAL59 LYS60 ALA61 ASP62 GLN63 ILE64 ASP65 PHE66 GLN67 ASP68 ALA69 MET70 ALA71 ASN72 LEU73 GLU74 ALA75 HIS76 GLY77 ASN78 ILE79 VAL80 ILE81 ASN82 ASP83 TRP84 ALA85 ALA86 LEU87 ALA88 ASP89 ALA90 ASP91 VAL92 VAL93 ILE94 SER95 THR96 LEU97 GLY98 GLY109 ASP110 ARG111 PHE112 ALA113 GLU114 LEU115 LYS116 PHE117 THR118 SER119 SER120 MET121 VAL122 GLN123 SER124 VAL125 GLY126 THR127 ASN128 LEU129 LYS130 GLU131 SER132 GLY133 PHE134 HIS135 GLY136 VAL137 LEU138 VAL139 VAL140 ILE141 SER142 ASN143 PRO144 VAL145 ASP146 VAL147 ILE148 THR149 ALA150 LEU151 PHE152 GLN153 HIS154 VAL155 THR156 GLY157 PHE158 PRO159 ALA160 HIS161 LYS162 VAL163 ILE164 GLY165 THR166 GLY167 THR168 LEU169 LEU170 ASP171 THR172 ALA173 ARG174 MET175 GLN176 ARG177 ALA178 VAL179 GLY180 GLU181 ALA182 PHE183 ASP184 LEU185 ASP186 PRO187 ARG188 SER189 VAL190 SER191 GLY192 TYR193 ASN194 LEU195 GLY196 GLU197 HIS198 GLY199 ASN200 SER201 GLN202 PHE203 VAL204 ALA205 TRP206 SER207 THR208 VAL209 ARG210 VAL211 MET212 GLY213 GLN214 PRO215 ILE216 VAL217 THR218 LEU219 ALA220 ASP221 ALA222 ILE225 ASP226 LEU227 ALA228 ALA229 ILE230 GLU231 GLU232 GLU233 ALA234 ARG235 LYS236 GLY237 GLY238 PHE239 THR240 VAL241 LEU242 ASN243 GLY244 LYS245 GLY246 TYR247 THR248 SER249 TYR250 GLY251 VAL252 ALA253 THR254 SER255 ALA256 ILE257 ARG258 ILE259 ALA260 LYS261 ALA262 VAL263 MET264 ALA265 ASP266 ALA267 HIS268 ALA269 GLU270 LEU271 VAL272 VAL273 SER274 ASN275 ARG276 ARG277 ASP278 ASP279 MET280 GLY281 MET282 TYR283 LEU284 SER285 TYR286 PRO287 ALA288 ILE289 ILE290 GLY291 ARG292 ASP293 GLY294 VAL295 LEU296 ALA297 GLU298 THR299 THR300 LEU301 ASP302 LEU303 THR304 THR305 ASP306 GLU307 GLN308 GLU309 LYS310 LEU311 LEU312 GLN313 SER314 ARG315 ASP316 TYR317 ILE318 GLN319 GLN320 ARG321 PHE322 ASP323 GLU324 ILE325 VAL326 ASP327 THR328 LEU329
Unit 4 ALA21 ARG22 LYS23 ILE24 GLY25 ILE26 ILE27 GLY28 LEU29 GLY30 ASN31 VAL32 GLY33 ALA34 ALA35 VAL36 ALA37 HIS38 GLY39 LEU40 ILE41 ALA42 GLN43 GLY44 VAL45 ALA46 ASP47 ASP48 TYR49 VAL50 PHE51 ILE52 ASP53 ALA54 ASN55 GLU56 ALA57 LYS58 VAL59 LYS60 ALA61 ASP62 GLN63 ILE64 ASP65 PHE66 GLN67 ASP68 ALA69 MET70 ALA71 ASN72 LEU73 GLU74 ALA75 HIS76 GLY77 ASN78 ILE79 VAL80 ILE81 ASN82 ASP83 TRP84 ALA85 ALA86 LEU87 ALA88 ASP89 ALA90 ASP91 VAL92 VAL93 ILE94 SER95 THR96 LEU97 GLY98 GLY109 ASP110 ARG111 PHE112 ALA113 GLU114 LEU115 LYS116 PHE117 THR118 SER119 SER120 MET121 VAL122 GLN123 SER124 VAL125 GLY126 THR127 ASN128 LEU129 LYS130 GLU131 SER132 GLY133 PHE134 HIS135 GLY136 VAL137 LEU138 VAL139 VAL140 ILE141 SER142 ASN143 PRO144 VAL145 ASP146 VAL147 ILE148 THR149 ALA150 LEU151 PHE152 GLN153 HIS154 VAL155 THR156 GLY157 PHE158 PRO159 ALA160 HIS161 LYS162 VAL163 ILE164 GLY165 THR166 GLY167 THR168 LEU169 LEU170 ASP171 THR172 ALA173 ARG174 MET175 GLN176 ARG177 ALA178 VAL179 GLY180 GLU181 ALA182 PHE183 ASP184 LEU185 ASP186 PRO187 ARG188 SER189 VAL190 SER191 GLY192 TYR193 ASN194 LEU195 GLY196 GLU197 HIS198 GLY199 ASN200 SER201 GLN202 PHE203 VAL204 ALA205 TRP206 SER207 THR208 VAL209 ARG210 VAL211 MET212 GLY213 GLN214 PRO215 ILE216 VAL217 THR218 LEU219 ALA220 ASP221 ALA222 ILE225 ASP226 LEU227 ALA228 ALA229 ILE230 GLU231 GLU232 GLU233 ALA234 ARG235 LYS236 GLY237 GLY238 PHE239 THR240 VAL241 LEU242 ASN243 GLY244 LYS245 GLY246 TYR247 THR248 SER249 TYR250 GLY251 VAL252 ALA253 THR254 SER255 ALA256 ILE257 ARG258 ILE259 ALA260 LYS261 ALA262 VAL263 MET264 ALA265 ASP266 ALA267 HIS268 ALA269 GLU270 LEU271 VAL272 VAL273 SER274 ASN275 ARG276 ARG277 ASP278 ASP279 MET280 GLY281 MET282 TYR283 LEU284 SER285 TYR286 PRO287 ALA288 ILE289 ILE290 GLY291 ARG292 ASP293 GLY294 VAL295 LEU296 ALA297 GLU298 THR299 THR300 LEU301 ASP302 LEU303 THR304 THR305 ASP306 GLU307 GLN308 GLU309 LYS310 LEU311 LEU312 GLN313 SER314 ARG315 ASP316 TYR317 ILE318 GLN319 GLN320 ARG321 PHE322 ASP323 GLU324 ILE325 VAL326 ASP327 THR328 LEU329
Ligands
Unit 5 NAD330 SO4331
Unit 6 NAD330 SO4331
Unit 7 NAD330 SO4331
Unit 8 NAD330 SO4331
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany