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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A HUMAN VGAMMA9/VDELTA2 T CELL RECEPTOR
Keywords IG DOMAIN, T CELL RECEPTOR, TCR, GDTCR, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1HXM     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GAMMA-DELTA T-CELL RECEPTOR  A 206 1611 0
2  Protein   GAMMA-DELTA T-CELL RECEPTOR  B 230 1828 0
3  Protein   GAMMA-DELTA T-CELL RECEPTOR  C 206 1611 0
4  Protein   GAMMA-DELTA T-CELL RECEPTOR  D 230 1828 0
5  Protein   GAMMA-DELTA T-CELL RECEPTOR  E 206 1611 0
6  Protein   GAMMA-DELTA T-CELL RECEPTOR  F 230 1828 0
7  Protein   GAMMA-DELTA T-CELL RECEPTOR  G 206 1611 0
8  Protein   GAMMA-DELTA T-CELL RECEPTOR  H 230 1828 0
9  Ligand   GAMMA-DELTA T-CELL RECEPTOR  D 1 0 5
10  Ligand   GAMMA-DELTA T-CELL RECEPTOR  F 1 0 5
11 Water     54 0 54
total       1800 13756 64
Proteins
Unit 1 ALA1 ILE2 GLU3 LEU4 VAL5 PRO6 GLU7 HIS8 GLN9 THR10 VAL11 PRO12 VAL13 SER14 ILE15 GLY16 VAL17 PRO18 ALA19 THR20 LEU21 ARG22 CYS23 SER24 MET25 LYS26 GLY27 GLU28 ALA29 ILE30 GLY31 ASN32 TYR33 TYR34 ILE35 ASN36 TRP37 TYR38 ARG39 LYS40 THR41 GLN42 GLY43 ASN44 THR45 MET46 THR47 PHE48 ILE49 TYR50 ARG51 GLU52 LYS53 ASP54 ILE55 TYR56 GLY57 PRO58 GLY59 PHE60 LYS61 ASP62 ASN63 PHE64 GLN65 GLY66 ASP67 ILE68 ASP69 ILE70 ALA71 LYS72 ASN73 LEU74 ALA75 VAL76 LEU77 LYS78 ILE79 LEU80 ALA81 PRO82 SER83 GLU84 ARG85 ASP86 GLU87 GLY88 SER89 TYR90 TYR91 CYS92 ALA93 CYS94 ASP95 THR96 LEU97 GLY98 MET99 GLY100 GLY101 GLU102 TYR103 THR104 ASP105 LYS106 LEU107 ILE108 PHE109 GLY110 LYS111 GLY112 THR113 ARG114 VAL115 THR116 VAL117 GLU118 PRO119 ARG120 SER121 GLN122 PRO123 HIS124 THR125 LYS126 PRO127 SER128 VAL129 PHE130 VAL131 MET132 LYS133 ASN134 GLY135 THR136 ASN137 VAL138 ALA139 CYS140 LEU141 VAL142 LYS143 GLU144 PHE145 TYR146 PRO147 LYS148 ASP149 ILE150 ARG151 ILE152 ASN153 LEU154 VAL155 SER156 SER157 LYS158 LYS159 ILE160 THR161 GLU162 PHE163 ASP164 PRO165 ALA166 ILE167 VAL168 ILE169 SER170 PRO171 SER172 GLY173 LYS174 TYR175 ASN176 ALA177 VAL178 LYS179 LEU180 GLY181 LYS182 TYR183 GLU184 ASP185 SER186 ASN187 SER188 VAL189 THR190 CYS191 SER192 VAL193 GLN194 HIS195 ASP196 ASN197 LYS198 THR199 VAL200 HIS201 SER202 THR203 ASP204 PHE205 GLU206
Unit 2 ALA1 GLY2 HIS3 LEU4 GLU5 GLN6 PRO7 GLN8 ILE9 SER10 SER11 THR12 LYS13 THR14 LEU15 SER16 LYS17 THR18 ALA19 ARG20 LEU21 GLU22 CYS23 VAL24 VAL25 SER26 GLY27 ILE28 THR29 ILE30 SER31 ALA32 THR33 SER34 VAL35 TYR36 TRP37 TYR38 ARG39 GLU40 ARG41 PRO42 GLY43 GLU44 VAL45 ILE46 GLN47 PHE48 LEU49 VAL50 SER51 ILE52 SER53 TYR54 ASP55 GLY56 THR57 VAL58 ARG59 LYS60 GLU61 SER62 GLY63 ILE64 PRO65 SER66 GLY67 LYS68 PHE69 GLU70 VAL71 ASP72 ARG73 ILE74 PRO75 GLU76 THR77 SER78 THR79 SER80 THR81 LEU82 THR83 ILE84 HIS85 ASN86 VAL87 GLU88 LYS89 GLN90 ASP91 ILE92 ALA93 THR94 TYR95 TYR96 CYS97 ALA98 LEU99 TRP100 GLU101 ALA102 GLN103 GLN104 GLU105 LEU106 GLY107 LYS108 LYS109 ILE110 LYS111 VAL112 PHE113 GLY114 PRO115 GLY116 THR117 LYS118 LEU119 ILE120 ILE121 THR122 ASP123 LYS124 GLN125 LEU126 ASP127 ALA128 ASP129 VAL130 SER131 PRO132 LYS133 PRO134 THR135 ILE136 PHE137 LEU138 PRO139 SER140 ILE141 ALA142 GLU143 THR144 LYS145 LEU146 GLN147 LYS148 ALA149 GLY150 THR151 TYR152 LEU153 CYS154 LEU155 LEU156 GLU157 LYS158 PHE159 PHE160 PRO161 ASP162 VAL163 ILE164 LYS165 ILE166 HIS167 TRP168 GLU169 GLU170 LYS171 LYS172 SER173 ASN174 THR175 ILE176 LEU177 GLY178 SER179 GLN180 GLU181 GLY182 ASN183 THR184 MET185 LYS186 THR187 ASN188 ASP189 THR190 TYR191 MET192 LYS193 PHE194 SER195 TRP196 LEU197 THR198 VAL199 PRO200 GLU201 LYS202 SER203 LEU204 ASP205 LYS206 GLU207 HIS208 ARG209 CYS210 ILE211 VAL212 ARG213 HIS214 GLU215 ASN216 ASN217 LYS218 ASN219 GLY220 VAL221 ASP222 GLN223 GLU224 ILE225 ILE226 PHE227 PRO228 PRO229 ILE230
Unit 3 ALA1 ILE2 GLU3 LEU4 VAL5 PRO6 GLU7 HIS8 GLN9 THR10 VAL11 PRO12 VAL13 SER14 ILE15 GLY16 VAL17 PRO18 ALA19 THR20 LEU21 ARG22 CYS23 SER24 MET25 LYS26 GLY27 GLU28 ALA29 ILE30 GLY31 ASN32 TYR33 TYR34 ILE35 ASN36 TRP37 TYR38 ARG39 LYS40 THR41 GLN42 GLY43 ASN44 THR45 MET46 THR47 PHE48 ILE49 TYR50 ARG51 GLU52 LYS53 ASP54 ILE55 TYR56 GLY57 PRO58 GLY59 PHE60 LYS61 ASP62 ASN63 PHE64 GLN65 GLY66 ASP67 ILE68 ASP69 ILE70 ALA71 LYS72 ASN73 LEU74 ALA75 VAL76 LEU77 LYS78 ILE79 LEU80 ALA81 PRO82 SER83 GLU84 ARG85 ASP86 GLU87 GLY88 SER89 TYR90 TYR91 CYS92 ALA93 CYS94 ASP95 THR96 LEU97 GLY98 MET99 GLY100 GLY101 GLU102 TYR103 THR104 ASP105 LYS106 LEU107 ILE108 PHE109 GLY110 LYS111 GLY112 THR113 ARG114 VAL115 THR116 VAL117 GLU118 PRO119 ARG120 SER121 GLN122 PRO123 HIS124 THR125 LYS126 PRO127 SER128 VAL129 PHE130 VAL131 MET132 LYS133 ASN134 GLY135 THR136 ASN137 VAL138 ALA139 CYS140 LEU141 VAL142 LYS143 GLU144 PHE145 TYR146 PRO147 LYS148 ASP149 ILE150 ARG151 ILE152 ASN153 LEU154 VAL155 SER156 SER157 LYS158 LYS159 ILE160 THR161 GLU162 PHE163 ASP164 PRO165 ALA166 ILE167 VAL168 ILE169 SER170 PRO171 SER172 GLY173 LYS174 TYR175 ASN176 ALA177 VAL178 LYS179 LEU180 GLY181 LYS182 TYR183 GLU184 ASP185 SER186 ASN187 SER188 VAL189 THR190 CYS191 SER192 VAL193 GLN194 HIS195 ASP196 ASN197 LYS198 THR199 VAL200 HIS201 SER202 THR203 ASP204 PHE205 GLU206
Unit 4 ALA1 GLY2 HIS3 LEU4 GLU5 GLN6 PRO7 GLN8 ILE9 SER10 SER11 THR12 LYS13 THR14 LEU15 SER16 LYS17 THR18 ALA19 ARG20 LEU21 GLU22 CYS23 VAL24 VAL25 SER26 GLY27 ILE28 THR29 ILE30 SER31 ALA32 THR33 SER34 VAL35 TYR36 TRP37 TYR38 ARG39 GLU40 ARG41 PRO42 GLY43 GLU44 VAL45 ILE46 GLN47 PHE48 LEU49 VAL50 SER51 ILE52 SER53 TYR54 ASP55 GLY56 THR57 VAL58 ARG59 LYS60 GLU61 SER62 GLY63 ILE64 PRO65 SER66 GLY67 LYS68 PHE69 GLU70 VAL71 ASP72 ARG73 ILE74 PRO75 GLU76 THR77 SER78 THR79 SER80 THR81 LEU82 THR83 ILE84 HIS85 ASN86 VAL87 GLU88 LYS89 GLN90 ASP91 ILE92 ALA93 THR94 TYR95 TYR96 CYS97 ALA98 LEU99 TRP100 GLU101 ALA102 GLN103 GLN104 GLU105 LEU106 GLY107 LYS108 LYS109 ILE110 LYS111 VAL112 PHE113 GLY114 PRO115 GLY116 THR117 LYS118 LEU119 ILE120 ILE121 THR122 ASP123 LYS124 GLN125 LEU126 ASP127 ALA128 ASP129 VAL130 SER131 PRO132 LYS133 PRO134 THR135 ILE136 PHE137 LEU138 PRO139 SER140 ILE141 ALA142 GLU143 THR144 LYS145 LEU146 GLN147 LYS148 ALA149 GLY150 THR151 TYR152 LEU153 CYS154 LEU155 LEU156 GLU157 LYS158 PHE159 PHE160 PRO161 ASP162 VAL163 ILE164 LYS165 ILE166 HIS167 TRP168 GLU169 GLU170 LYS171 LYS172 SER173 ASN174 THR175 ILE176 LEU177 GLY178 SER179 GLN180 GLU181 GLY182 ASN183 THR184 MET185 LYS186 THR187 ASN188 ASP189 THR190 TYR191 MET192 LYS193 PHE194 SER195 TRP196 LEU197 THR198 VAL199 PRO200 GLU201 LYS202 SER203 LEU204 ASP205 LYS206 GLU207 HIS208 ARG209 CYS210 ILE211 VAL212 ARG213 HIS214 GLU215 ASN216 ASN217 LYS218 ASN219 GLY220 VAL221 ASP222 GLN223 GLU224 ILE225 ILE226 PHE227 PRO228 PRO229 ILE230
Unit 5 ALA1 ILE2 GLU3 LEU4 VAL5 PRO6 GLU7 HIS8 GLN9 THR10 VAL11 PRO12 VAL13 SER14 ILE15 GLY16 VAL17 PRO18 ALA19 THR20 LEU21 ARG22 CYS23 SER24 MET25 LYS26 GLY27 GLU28 ALA29 ILE30 GLY31 ASN32 TYR33 TYR34 ILE35 ASN36 TRP37 TYR38 ARG39 LYS40 THR41 GLN42 GLY43 ASN44 THR45 MET46 THR47 PHE48 ILE49 TYR50 ARG51 GLU52 LYS53 ASP54 ILE55 TYR56 GLY57 PRO58 GLY59 PHE60 LYS61 ASP62 ASN63 PHE64 GLN65 GLY66 ASP67 ILE68 ASP69 ILE70 ALA71 LYS72 ASN73 LEU74 ALA75 VAL76 LEU77 LYS78 ILE79 LEU80 ALA81 PRO82 SER83 GLU84 ARG85 ASP86 GLU87 GLY88 SER89 TYR90 TYR91 CYS92 ALA93 CYS94 ASP95 THR96 LEU97 GLY98 MET99 GLY100 GLY101 GLU102 TYR103 THR104 ASP105 LYS106 LEU107 ILE108 PHE109 GLY110 LYS111 GLY112 THR113 ARG114 VAL115 THR116 VAL117 GLU118 PRO119 ARG120 SER121 GLN122 PRO123 HIS124 THR125 LYS126 PRO127 SER128 VAL129 PHE130 VAL131 MET132 LYS133 ASN134 GLY135 THR136 ASN137 VAL138 ALA139 CYS140 LEU141 VAL142 LYS143 GLU144 PHE145 TYR146 PRO147 LYS148 ASP149 ILE150 ARG151 ILE152 ASN153 LEU154 VAL155 SER156 SER157 LYS158 LYS159 ILE160 THR161 GLU162 PHE163 ASP164 PRO165 ALA166 ILE167 VAL168 ILE169 SER170 PRO171 SER172 GLY173 LYS174 TYR175 ASN176 ALA177 VAL178 LYS179 LEU180 GLY181 LYS182 TYR183 GLU184 ASP185 SER186 ASN187 SER188 VAL189 THR190 CYS191 SER192 VAL193 GLN194 HIS195 ASP196 ASN197 LYS198 THR199 VAL200 HIS201 SER202 THR203 ASP204 PHE205 GLU206
Unit 6 ALA1 GLY2 HIS3 LEU4 GLU5 GLN6 PRO7 GLN8 ILE9 SER10 SER11 THR12 LYS13 THR14 LEU15 SER16 LYS17 THR18 ALA19 ARG20 LEU21 GLU22 CYS23 VAL24 VAL25 SER26 GLY27 ILE28 THR29 ILE30 SER31 ALA32 THR33 SER34 VAL35 TYR36 TRP37 TYR38 ARG39 GLU40 ARG41 PRO42 GLY43 GLU44 VAL45 ILE46 GLN47 PHE48 LEU49 VAL50 SER51 ILE52 SER53 TYR54 ASP55 GLY56 THR57 VAL58 ARG59 LYS60 GLU61 SER62 GLY63 ILE64 PRO65 SER66 GLY67 LYS68 PHE69 GLU70 VAL71 ASP72 ARG73 ILE74 PRO75 GLU76 THR77 SER78 THR79 SER80 THR81 LEU82 THR83 ILE84 HIS85 ASN86 VAL87 GLU88 LYS89 GLN90 ASP91 ILE92 ALA93 THR94 TYR95 TYR96 CYS97 ALA98 LEU99 TRP100 GLU101 ALA102 GLN103 GLN104 GLU105 LEU106 GLY107 LYS108 LYS109 ILE110 LYS111 VAL112 PHE113 GLY114 PRO115 GLY116 THR117 LYS118 LEU119 ILE120 ILE121 THR122 ASP123 LYS124 GLN125 LEU126 ASP127 ALA128 ASP129 VAL130 SER131 PRO132 LYS133 PRO134 THR135 ILE136 PHE137 LEU138 PRO139 SER140 ILE141 ALA142 GLU143 THR144 LYS145 LEU146 GLN147 LYS148 ALA149 GLY150 THR151 TYR152 LEU153 CYS154 LEU155 LEU156 GLU157 LYS158 PHE159 PHE160 PRO161 ASP162 VAL163 ILE164 LYS165 ILE166 HIS167 TRP168 GLU169 GLU170 LYS171 LYS172 SER173 ASN174 THR175 ILE176 LEU177 GLY178 SER179 GLN180 GLU181 GLY182 ASN183 THR184 MET185 LYS186 THR187 ASN188 ASP189 THR190 TYR191 MET192 LYS193 PHE194 SER195 TRP196 LEU197 THR198 VAL199 PRO200 GLU201 LYS202 SER203 LEU204 ASP205 LYS206 GLU207 HIS208 ARG209 CYS210 ILE211 VAL212 ARG213 HIS214 GLU215 ASN216 ASN217 LYS218 ASN219 GLY220 VAL221 ASP222 GLN223 GLU224 ILE225 ILE226 PHE227 PRO228 PRO229 ILE230
Unit 7 ALA1 ILE2 GLU3 LEU4 VAL5 PRO6 GLU7 HIS8 GLN9 THR10 VAL11 PRO12 VAL13 SER14 ILE15 GLY16 VAL17 PRO18 ALA19 THR20 LEU21 ARG22 CYS23 SER24 MET25 LYS26 GLY27 GLU28 ALA29 ILE30 GLY31 ASN32 TYR33 TYR34 ILE35 ASN36 TRP37 TYR38 ARG39 LYS40 THR41 GLN42 GLY43 ASN44 THR45 MET46 THR47 PHE48 ILE49 TYR50 ARG51 GLU52 LYS53 ASP54 ILE55 TYR56 GLY57 PRO58 GLY59 PHE60 LYS61 ASP62 ASN63 PHE64 GLN65 GLY66 ASP67 ILE68 ASP69 ILE70 ALA71 LYS72 ASN73 LEU74 ALA75 VAL76 LEU77 LYS78 ILE79 LEU80 ALA81 PRO82 SER83 GLU84 ARG85 ASP86 GLU87 GLY88 SER89 TYR90 TYR91 CYS92 ALA93 CYS94 ASP95 THR96 LEU97 GLY98 MET99 GLY100 GLY101 GLU102 TYR103 THR104 ASP105 LYS106 LEU107 ILE108 PHE109 GLY110 LYS111 GLY112 THR113 ARG114 VAL115 THR116 VAL117 GLU118 PRO119 ARG120 SER121 GLN122 PRO123 HIS124 THR125 LYS126 PRO127 SER128 VAL129 PHE130 VAL131 MET132 LYS133 ASN134 GLY135 THR136 ASN137 VAL138 ALA139 CYS140 LEU141 VAL142 LYS143 GLU144 PHE145 TYR146 PRO147 LYS148 ASP149 ILE150 ARG151 ILE152 ASN153 LEU154 VAL155 SER156 SER157 LYS158 LYS159 ILE160 THR161 GLU162 PHE163 ASP164 PRO165 ALA166 ILE167 VAL168 ILE169 SER170 PRO171 SER172 GLY173 LYS174 TYR175 ASN176 ALA177 VAL178 LYS179 LEU180 GLY181 LYS182 TYR183 GLU184 ASP185 SER186 ASN187 SER188 VAL189 THR190 CYS191 SER192 VAL193 GLN194 HIS195 ASP196 ASN197 LYS198 THR199 VAL200 HIS201 SER202 THR203 ASP204 PHE205 GLU206
Unit 8 ALA1 GLY2 HIS3 LEU4 GLU5 GLN6 PRO7 GLN8 ILE9 SER10 SER11 THR12 LYS13 THR14 LEU15 SER16 LYS17 THR18 ALA19 ARG20 LEU21 GLU22 CYS23 VAL24 VAL25 SER26 GLY27 ILE28 THR29 ILE30 SER31 ALA32 THR33 SER34 VAL35 TYR36 TRP37 TYR38 ARG39 GLU40 ARG41 PRO42 GLY43 GLU44 VAL45 ILE46 GLN47 PHE48 LEU49 VAL50 SER51 ILE52 SER53 TYR54 ASP55 GLY56 THR57 VAL58 ARG59 LYS60 GLU61 SER62 GLY63 ILE64 PRO65 SER66 GLY67 LYS68 PHE69 GLU70 VAL71 ASP72 ARG73 ILE74 PRO75 GLU76 THR77 SER78 THR79 SER80 THR81 LEU82 THR83 ILE84 HIS85 ASN86 VAL87 GLU88 LYS89 GLN90 ASP91 ILE92 ALA93 THR94 TYR95 TYR96 CYS97 ALA98 LEU99 TRP100 GLU101 ALA102 GLN103 GLN104 GLU105 LEU106 GLY107 LYS108 LYS109 ILE110 LYS111 VAL112 PHE113 GLY114 PRO115 GLY116 THR117 LYS118 LEU119 ILE120 ILE121 THR122 ASP123 LYS124 GLN125 LEU126 ASP127 ALA128 ASP129 VAL130 SER131 PRO132 LYS133 PRO134 THR135 ILE136 PHE137 LEU138 PRO139 SER140 ILE141 ALA142 GLU143 THR144 LYS145 LEU146 GLN147 LYS148 ALA149 GLY150 THR151 TYR152 LEU153 CYS154 LEU155 LEU156 GLU157 LYS158 PHE159 PHE160 PRO161 ASP162 VAL163 ILE164 LYS165 ILE166 HIS167 TRP168 GLU169 GLU170 LYS171 LYS172 SER173 ASN174 THR175 ILE176 LEU177 GLY178 SER179 GLN180 GLU181 GLY182 ASN183 THR184 MET185 LYS186 THR187 ASN188 ASP189 THR190 TYR191 MET192 LYS193 PHE194 SER195 TRP196 LEU197 THR198 VAL199 PRO200 GLU201 LYS202 SER203 LEU204 ASP205 LYS206 GLU207 HIS208 ARG209 CYS210 ILE211 VAL212 ARG213 HIS214 GLU215 ASN216 ASN217 LYS218 ASN219 GLY220 VAL221 ASP222 GLN223 GLU224 ILE225 ILE226 PHE227 PRO228 PRO229 ILE230
Ligands
Unit 9 SO41002
Unit 10 SO41001
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany