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Sequence, Chains, Asymmetric and Biological Units

Title BINDING OF NUCLEOTIDES TO NDP KINASE
Keywords METABOLIC ROLE, TRANSFERASE, KINASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1HIY     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  A 150 1147 0
2  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  B 150 1147 0
3  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  C 150 1147 0
4  Ligand   NUCLEOSIDE DIPHOSPHATE KINASE  A 1 0 27
5  Ligand   NUCLEOSIDE DIPHOSPHATE KINASE  B 1 0 27
6  Ligand   NUCLEOSIDE DIPHOSPHATE KINASE  C 1 0 27
7 Water     41 0 41
total       494 3441 122

Proteins
Unit 1 VAL6 ASN7 LYS8 GLU9 ARG10 THR11 PHE12 LEU13 ALA14 VAL15 LYS16 PRO17 ASP18 GLY19 VAL20 ALA21 ARG22 GLY23 LEU24 VAL25 GLY26 GLU27 ILE28 ILE29 ALA30 ARG31 TYR32 GLU33 LYS34 LYS35 GLY36 PHE37 VAL38 LEU39 VAL40 GLY41 LEU42 LYS43 GLN44 LEU45 VAL46 PRO47 THR48 LYS49 ASP50 LEU51 ALA52 GLU53 SER54 HIS55 TYR56 ALA57 GLU58 HIS59 LYS60 GLU61 ARG62 PRO63 PHE64 PHE65 GLY66 GLY67 LEU68 VAL69 SER70 PHE71 ILE72 THR73 SER74 GLY75 PRO76 VAL77 VAL78 ALA79 MET80 VAL81 PHE82 GLU83 GLY84 LYS85 GLY86 VAL87 VAL88 ALA89 SER90 ALA91 ARG92 LEU93 MET94 ILE95 GLY96 VAL97 THR98 ASN99 PRO100 LEU101 ALA102 SER103 ALA104 PRO105 GLY106 SER107 ILE108 ARG109 GLY110 ASP111 PHE112 GLY113 VAL114 ASP115 VAL116 GLY117 ARG118 ASN119 ILE120 ILE121 HIS122 GLY123 SER124 ASP125 SER126 VAL127 GLU128 SER129 ALA130 ASN131 ARG132 GLU133 ILE134 ALA135 LEU136 TRP137 PHE138 LYS139 PRO140 GLU141 GLU142 LEU143 LEU144 THR145 GLU146 VAL147 LYS148 PRO149 ASN150 PRO151 ASN152 LEU153 TYR154 GLU155
Unit 2 VAL206 ASN207 LYS208 GLU209 ARG210 THR211 PHE212 LEU213 ALA214 VAL215 LYS216 PRO217 ASP218 GLY219 VAL220 ALA221 ARG222 GLY223 LEU224 VAL225 GLY226 GLU227 ILE228 ILE229 ALA230 ARG231 TYR232 GLU233 LYS234 LYS235 GLY236 PHE237 VAL238 LEU239 VAL240 GLY241 LEU242 LYS243 GLN244 LEU245 VAL246 PRO247 THR248 LYS249 ASP250 LEU251 ALA252 GLU253 SER254 HIS255 TYR256 ALA257 GLU258 HIS259 LYS260 GLU261 ARG262 PRO263 PHE264 PHE265 GLY266 GLY267 LEU268 VAL269 SER270 PHE271 ILE272 THR273 SER274 GLY275 PRO276 VAL277 VAL278 ALA279 MET280 VAL281 PHE282 GLU283 GLY284 LYS285 GLY286 VAL287 VAL288 ALA289 SER290 ALA291 ARG292 LEU293 MET294 ILE295 GLY296 VAL297 THR298 ASN299 PRO300 LEU301 ALA302 SER303 ALA304 PRO305 GLY306 SER307 ILE308 ARG309 GLY310 ASP311 PHE312 GLY313 VAL314 ASP315 VAL316 GLY317 ARG318 ASN319 ILE320 ILE321 HIS322 GLY323 SER324 ASP325 SER326 VAL327 GLU328 SER329 ALA330 ASN331 ARG332 GLU333 ILE334 ALA335 LEU336 TRP337 PHE338 LYS339 PRO340 GLU341 GLU342 LEU343 LEU344 THR345 GLU346 VAL347 LYS348 PRO349 ASN350 PRO351 ASN352 LEU353 TYR354 GLU355
Unit 3 VAL406 ASN407 LYS408 GLU409 ARG410 THR411 PHE412 LEU413 ALA414 VAL415 LYS416 PRO417 ASP418 GLY419 VAL420 ALA421 ARG422 GLY423 LEU424 VAL425 GLY426 GLU427 ILE428 ILE429 ALA430 ARG431 TYR432 GLU433 LYS434 LYS435 GLY436 PHE437 VAL438 LEU439 VAL440 GLY441 LEU442 LYS443 GLN444 LEU445 VAL446 PRO447 THR448 LYS449 ASP450 LEU451 ALA452 GLU453 SER454 HIS455 TYR456 ALA457 GLU458 HIS459 LYS460 GLU461 ARG462 PRO463 PHE464 PHE465 GLY466 GLY467 LEU468 VAL469 SER470 PHE471 ILE472 THR473 SER474 GLY475 PRO476 VAL477 VAL478 ALA479 MET480 VAL481 PHE482 GLU483 GLY484 LYS485 GLY486 VAL487 VAL488 ALA489 SER490 ALA491 ARG492 LEU493 MET494 ILE495 GLY496 VAL497 THR498 ASN499 PRO500 LEU501 ALA502 SER503 ALA504 PRO505 GLY506 SER507 ILE508 ARG509 GLY510 ASP511 PHE512 GLY513 VAL514 ASP515 VAL516 GLY517 ARG518 ASN519 ILE520 ILE521 HIS522 GLY523 SER524 ASP525 SER526 VAL527 GLU528 SER529 ALA530 ASN531 ARG532 GLU533 ILE534 ALA535 LEU536 TRP537 PHE538 LYS539 PRO540 GLU541 GLU542 LEU543 LEU544 THR545 GLU546 VAL547 LYS548 PRO549 ASN550 PRO551 ASN552 LEU553 TYR554 GLU555

Ligands
Unit 4 3AN1156
Unit 5 3AN1356
Unit 6 3AN1556

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany