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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TETRAMERIC TIM FROM PYROCOCCUS WOESEI.
Keywords ISOMERASE, THERMOSTABILITY, PYROCOCCUS, TRIOSEPHOSPHATE ISOM TETRAMERIC
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1HG3     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRIOSEPHOSPHATE ISOMERASE  A 224 1654 0
2  Protein   TRIOSEPHOSPHATE ISOMERASE  B 224 1654 0
3  Protein   TRIOSEPHOSPHATE ISOMERASE  C 224 1654 0
4  Protein   TRIOSEPHOSPHATE ISOMERASE  D 224 1654 0
5  Protein   TRIOSEPHOSPHATE ISOMERASE  E 224 1654 0
6  Protein   TRIOSEPHOSPHATE ISOMERASE  F 224 1654 0
7  Protein   TRIOSEPHOSPHATE ISOMERASE  G 224 1654 0
8  Protein   TRIOSEPHOSPHATE ISOMERASE  H 224 1654 0
9  Ligand   TRIOSEPHOSPHATE ISOMERASE  A 1 0 9
10  Ligand   TRIOSEPHOSPHATE ISOMERASE  B 1 0 9
11  Ligand   TRIOSEPHOSPHATE ISOMERASE  C 1 0 9
12  Ligand   TRIOSEPHOSPHATE ISOMERASE  D 1 0 9
13  Ligand   TRIOSEPHOSPHATE ISOMERASE  E 1 0 9
14  Ligand   TRIOSEPHOSPHATE ISOMERASE  F 1 0 9
15  Ligand   TRIOSEPHOSPHATE ISOMERASE  G 1 0 9
16  Ligand   TRIOSEPHOSPHATE ISOMERASE  H 1 0 9
17 Water     346 0 346
total       2146 13232 418

Proteins
Unit 1 ALA2 LYS3 LEU4 LYS5 GLU6 PRO7 ILE8 ILE9 ALA10 ILE11 ASN12 PHE13 LYS14 THR15 TYR16 ILE17 GLU18 ALA19 THR20 GLY21 LYS22 ARG23 ALA24 LEU25 GLU26 ILE27 ALA28 LYS29 ALA30 ALA31 GLU32 LYS33 VAL34 TYR35 LYS36 GLU37 THR38 GLY39 VAL40 THR41 ILE42 VAL43 VAL44 ALA45 PRO46 GLN47 LEU48 VAL49 ASP50 LEU51 ARG52 MET53 ILE54 ALA55 GLU56 SER57 VAL58 GLU59 ILE60 PRO61 VAL62 PHE63 ALA64 GLN65 HIS66 ILE67 ASP68 PRO69 ILE70 LYS71 PRO72 GLY73 SER74 HIS75 THR76 GLY77 HIS78 VAL79 LEU80 PRO81 GLU82 ALA83 VAL84 LYS85 GLU86 ALA87 GLY88 ALA89 VAL90 GLY91 THR92 LEU93 LEU94 ASN95 HIS96 SER97 GLU98 ASN99 ARG100 MET101 ILE102 LEU103 ALA104 ASP105 LEU106 GLU107 ALA108 ALA109 ILE110 ARG111 ARG112 ALA113 GLU114 GLU115 VAL116 GLY117 LEU118 MET119 THR120 MET121 VAL122 CYS123 SER124 ASN125 ASN126 PRO127 ALA128 VAL129 SER130 ALA131 ALA132 VAL133 ALA134 ALA135 LEU136 ASN137 PRO138 ASP139 TYR140 VAL141 ALA142 VAL143 GLU144 PRO145 PRO146 GLU147 LEU148 ILE149 GLY150 THR151 GLY152 ILE153 PRO154 VAL155 SER156 LYS157 ALA158 LYS159 PRO160 GLU161 VAL162 ILE163 THR164 ASN165 THR166 VAL167 GLU168 LEU169 VAL170 LYS171 LYS172 VAL173 ASN174 PRO175 GLU176 VAL177 LYS178 VAL179 LEU180 CYS181 GLY182 ALA183 GLY184 ILE185 SER186 THR187 GLY188 GLU189 ASP190 VAL191 LYS192 LYS193 ALA194 ILE195 GLU196 LEU197 GLY198 THR199 VAL200 GLY201 VAL202 LEU203 LEU204 ALA205 SER206 GLY207 VAL208 THR209 LYS210 ALA211 LYS212 ASP213 PRO214 GLU215 LYS216 ALA217 ILE218 TRP219 ASP220 LEU221 VAL222 SER223 GLY224 ILE225
Unit 2 ALA2 LYS3 LEU4 LYS5 GLU6 PRO7 ILE8 ILE9 ALA10 ILE11 ASN12 PHE13 LYS14 THR15 TYR16 ILE17 GLU18 ALA19 THR20 GLY21 LYS22 ARG23 ALA24 LEU25 GLU26 ILE27 ALA28 LYS29 ALA30 ALA31 GLU32 LYS33 VAL34 TYR35 LYS36 GLU37 THR38 GLY39 VAL40 THR41 ILE42 VAL43 VAL44 ALA45 PRO46 GLN47 LEU48 VAL49 ASP50 LEU51 ARG52 MET53 ILE54 ALA55 GLU56 SER57 VAL58 GLU59 ILE60 PRO61 VAL62 PHE63 ALA64 GLN65 HIS66 ILE67 ASP68 PRO69 ILE70 LYS71 PRO72 GLY73 SER74 HIS75 THR76 GLY77 HIS78 VAL79 LEU80 PRO81 GLU82 ALA83 VAL84 LYS85 GLU86 ALA87 GLY88 ALA89 VAL90 GLY91 THR92 LEU93 LEU94 ASN95 HIS96 SER97 GLU98 ASN99 ARG100 MET101 ILE102 LEU103 ALA104 ASP105 LEU106 GLU107 ALA108 ALA109 ILE110 ARG111 ARG112 ALA113 GLU114 GLU115 VAL116 GLY117 LEU118 MET119 THR120 MET121 VAL122 CYS123 SER124 ASN125 ASN126 PRO127 ALA128 VAL129 SER130 ALA131 ALA132 VAL133 ALA134 ALA135 LEU136 ASN137 PRO138 ASP139 TYR140 VAL141 ALA142 VAL143 GLU144 PRO145 PRO146 GLU147 LEU148 ILE149 GLY150 THR151 GLY152 ILE153 PRO154 VAL155 SER156 LYS157 ALA158 LYS159 PRO160 GLU161 VAL162 ILE163 THR164 ASN165 THR166 VAL167 GLU168 LEU169 VAL170 LYS171 LYS172 VAL173 ASN174 PRO175 GLU176 VAL177 LYS178 VAL179 LEU180 CYS181 GLY182 ALA183 GLY184 ILE185 SER186 THR187 GLY188 GLU189 ASP190 VAL191 LYS192 LYS193 ALA194 ILE195 GLU196 LEU197 GLY198 THR199 VAL200 GLY201 VAL202 LEU203 LEU204 ALA205 SER206 GLY207 VAL208 THR209 LYS210 ALA211 LYS212 ASP213 PRO214 GLU215 LYS216 ALA217 ILE218 TRP219 ASP220 LEU221 VAL222 SER223 GLY224 ILE225
Unit 3 ALA2 LYS3 LEU4 LYS5 GLU6 PRO7 ILE8 ILE9 ALA10 ILE11 ASN12 PHE13 LYS14 THR15 TYR16 ILE17 GLU18 ALA19 THR20 GLY21 LYS22 ARG23 ALA24 LEU25 GLU26 ILE27 ALA28 LYS29 ALA30 ALA31 GLU32 LYS33 VAL34 TYR35 LYS36 GLU37 THR38 GLY39 VAL40 THR41 ILE42 VAL43 VAL44 ALA45 PRO46 GLN47 LEU48 VAL49 ASP50 LEU51 ARG52 MET53 ILE54 ALA55 GLU56 SER57 VAL58 GLU59 ILE60 PRO61 VAL62 PHE63 ALA64 GLN65 HIS66 ILE67 ASP68 PRO69 ILE70 LYS71 PRO72 GLY73 SER74 HIS75 THR76 GLY77 HIS78 VAL79 LEU80 PRO81 GLU82 ALA83 VAL84 LYS85 GLU86 ALA87 GLY88 ALA89 VAL90 GLY91 THR92 LEU93 LEU94 ASN95 HIS96 SER97 GLU98 ASN99 ARG100 MET101 ILE102 LEU103 ALA104 ASP105 LEU106 GLU107 ALA108 ALA109 ILE110 ARG111 ARG112 ALA113 GLU114 GLU115 VAL116 GLY117 LEU118 MET119 THR120 MET121 VAL122 CYS123 SER124 ASN125 ASN126 PRO127 ALA128 VAL129 SER130 ALA131 ALA132 VAL133 ALA134 ALA135 LEU136 ASN137 PRO138 ASP139 TYR140 VAL141 ALA142 VAL143 GLU144 PRO145 PRO146 GLU147 LEU148 ILE149 GLY150 THR151 GLY152 ILE153 PRO154 VAL155 SER156 LYS157 ALA158 LYS159 PRO160 GLU161 VAL162 ILE163 THR164 ASN165 THR166 VAL167 GLU168 LEU169 VAL170 LYS171 LYS172 VAL173 ASN174 PRO175 GLU176 VAL177 LYS178 VAL179 LEU180 CYS181 GLY182 ALA183 GLY184 ILE185 SER186 THR187 GLY188 GLU189 ASP190 VAL191 LYS192 LYS193 ALA194 ILE195 GLU196 LEU197 GLY198 THR199 VAL200 GLY201 VAL202 LEU203 LEU204 ALA205 SER206 GLY207 VAL208 THR209 LYS210 ALA211 LYS212 ASP213 PRO214 GLU215 LYS216 ALA217 ILE218 TRP219 ASP220 LEU221 VAL222 SER223 GLY224 ILE225
Unit 4 ALA2 LYS3 LEU4 LYS5 GLU6 PRO7 ILE8 ILE9 ALA10 ILE11 ASN12 PHE13 LYS14 THR15 TYR16 ILE17 GLU18 ALA19 THR20 GLY21 LYS22 ARG23 ALA24 LEU25 GLU26 ILE27 ALA28 LYS29 ALA30 ALA31 GLU32 LYS33 VAL34 TYR35 LYS36 GLU37 THR38 GLY39 VAL40 THR41 ILE42 VAL43 VAL44 ALA45 PRO46 GLN47 LEU48 VAL49 ASP50 LEU51 ARG52 MET53 ILE54 ALA55 GLU56 SER57 VAL58 GLU59 ILE60 PRO61 VAL62 PHE63 ALA64 GLN65 HIS66 ILE67 ASP68 PRO69 ILE70 LYS71 PRO72 GLY73 SER74 HIS75 THR76 GLY77 HIS78 VAL79 LEU80 PRO81 GLU82 ALA83 VAL84 LYS85 GLU86 ALA87 GLY88 ALA89 VAL90 GLY91 THR92 LEU93 LEU94 ASN95 HIS96 SER97 GLU98 ASN99 ARG100 MET101 ILE102 LEU103 ALA104 ASP105 LEU106 GLU107 ALA108 ALA109 ILE110 ARG111 ARG112 ALA113 GLU114 GLU115 VAL116 GLY117 LEU118 MET119 THR120 MET121 VAL122 CYS123 SER124 ASN125 ASN126 PRO127 ALA128 VAL129 SER130 ALA131 ALA132 VAL133 ALA134 ALA135 LEU136 ASN137 PRO138 ASP139 TYR140 VAL141 ALA142 VAL143 GLU144 PRO145 PRO146 GLU147 LEU148 ILE149 GLY150 THR151 GLY152 ILE153 PRO154 VAL155 SER156 LYS157 ALA158 LYS159 PRO160 GLU161 VAL162 ILE163 THR164 ASN165 THR166 VAL167 GLU168 LEU169 VAL170 LYS171 LYS172 VAL173 ASN174 PRO175 GLU176 VAL177 LYS178 VAL179 LEU180 CYS181 GLY182 ALA183 GLY184 ILE185 SER186 THR187 GLY188 GLU189 ASP190 VAL191 LYS192 LYS193 ALA194 ILE195 GLU196 LEU197 GLY198 THR199 VAL200 GLY201 VAL202 LEU203 LEU204 ALA205 SER206 GLY207 VAL208 THR209 LYS210 ALA211 LYS212 ASP213 PRO214 GLU215 LYS216 ALA217 ILE218 TRP219 ASP220 LEU221 VAL222 SER223 GLY224 ILE225
Unit 5 ALA2 LYS3 LEU4 LYS5 GLU6 PRO7 ILE8 ILE9 ALA10 ILE11 ASN12 PHE13 LYS14 THR15 TYR16 ILE17 GLU18 ALA19 THR20 GLY21 LYS22 ARG23 ALA24 LEU25 GLU26 ILE27 ALA28 LYS29 ALA30 ALA31 GLU32 LYS33 VAL34 TYR35 LYS36 GLU37 THR38 GLY39 VAL40 THR41 ILE42 VAL43 VAL44 ALA45 PRO46 GLN47 LEU48 VAL49 ASP50 LEU51 ARG52 MET53 ILE54 ALA55 GLU56 SER57 VAL58 GLU59 ILE60 PRO61 VAL62 PHE63 ALA64 GLN65 HIS66 ILE67 ASP68 PRO69 ILE70 LYS71 PRO72 GLY73 SER74 HIS75 THR76 GLY77 HIS78 VAL79 LEU80 PRO81 GLU82 ALA83 VAL84 LYS85 GLU86 ALA87 GLY88 ALA89 VAL90 GLY91 THR92 LEU93 LEU94 ASN95 HIS96 SER97 GLU98 ASN99 ARG100 MET101 ILE102 LEU103 ALA104 ASP105 LEU106 GLU107 ALA108 ALA109 ILE110 ARG111 ARG112 ALA113 GLU114 GLU115 VAL116 GLY117 LEU118 MET119 THR120 MET121 VAL122 CYS123 SER124 ASN125 ASN126 PRO127 ALA128 VAL129 SER130 ALA131 ALA132 VAL133 ALA134 ALA135 LEU136 ASN137 PRO138 ASP139 TYR140 VAL141 ALA142 VAL143 GLU144 PRO145 PRO146 GLU147 LEU148 ILE149 GLY150 THR151 GLY152 ILE153 PRO154 VAL155 SER156 LYS157 ALA158 LYS159 PRO160 GLU161 VAL162 ILE163 THR164 ASN165 THR166 VAL167 GLU168 LEU169 VAL170 LYS171 LYS172 VAL173 ASN174 PRO175 GLU176 VAL177 LYS178 VAL179 LEU180 CYS181 GLY182 ALA183 GLY184 ILE185 SER186 THR187 GLY188 GLU189 ASP190 VAL191 LYS192 LYS193 ALA194 ILE195 GLU196 LEU197 GLY198 THR199 VAL200 GLY201 VAL202 LEU203 LEU204 ALA205 SER206 GLY207 VAL208 THR209 LYS210 ALA211 LYS212 ASP213 PRO214 GLU215 LYS216 ALA217 ILE218 TRP219 ASP220 LEU221 VAL222 SER223 GLY224 ILE225
Unit 6 ALA2 LYS3 LEU4 LYS5 GLU6 PRO7 ILE8 ILE9 ALA10 ILE11 ASN12 PHE13 LYS14 THR15 TYR16 ILE17 GLU18 ALA19 THR20 GLY21 LYS22 ARG23 ALA24 LEU25 GLU26 ILE27 ALA28 LYS29 ALA30 ALA31 GLU32 LYS33 VAL34 TYR35 LYS36 GLU37 THR38 GLY39 VAL40 THR41 ILE42 VAL43 VAL44 ALA45 PRO46 GLN47 LEU48 VAL49 ASP50 LEU51 ARG52 MET53 ILE54 ALA55 GLU56 SER57 VAL58 GLU59 ILE60 PRO61 VAL62 PHE63 ALA64 GLN65 HIS66 ILE67 ASP68 PRO69 ILE70 LYS71 PRO72 GLY73 SER74 HIS75 THR76 GLY77 HIS78 VAL79 LEU80 PRO81 GLU82 ALA83 VAL84 LYS85 GLU86 ALA87 GLY88 ALA89 VAL90 GLY91 THR92 LEU93 LEU94 ASN95 HIS96 SER97 GLU98 ASN99 ARG100 MET101 ILE102 LEU103 ALA104 ASP105 LEU106 GLU107 ALA108 ALA109 ILE110 ARG111 ARG112 ALA113 GLU114 GLU115 VAL116 GLY117 LEU118 MET119 THR120 MET121 VAL122 CYS123 SER124 ASN125 ASN126 PRO127 ALA128 VAL129 SER130 ALA131 ALA132 VAL133 ALA134 ALA135 LEU136 ASN137 PRO138 ASP139 TYR140 VAL141 ALA142 VAL143 GLU144 PRO145 PRO146 GLU147 LEU148 ILE149 GLY150 THR151 GLY152 ILE153 PRO154 VAL155 SER156 LYS157 ALA158 LYS159 PRO160 GLU161 VAL162 ILE163 THR164 ASN165 THR166 VAL167 GLU168 LEU169 VAL170 LYS171 LYS172 VAL173 ASN174 PRO175 GLU176 VAL177 LYS178 VAL179 LEU180 CYS181 GLY182 ALA183 GLY184 ILE185 SER186 THR187 GLY188 GLU189 ASP190 VAL191 LYS192 LYS193 ALA194 ILE195 GLU196 LEU197 GLY198 THR199 VAL200 GLY201 VAL202 LEU203 LEU204 ALA205 SER206 GLY207 VAL208 THR209 LYS210 ALA211 LYS212 ASP213 PRO214 GLU215 LYS216 ALA217 ILE218 TRP219 ASP220 LEU221 VAL222 SER223 GLY224 ILE225
Unit 7 ALA2 LYS3 LEU4 LYS5 GLU6 PRO7 ILE8 ILE9 ALA10 ILE11 ASN12 PHE13 LYS14 THR15 TYR16 ILE17 GLU18 ALA19 THR20 GLY21 LYS22 ARG23 ALA24 LEU25 GLU26 ILE27 ALA28 LYS29 ALA30 ALA31 GLU32 LYS33 VAL34 TYR35 LYS36 GLU37 THR38 GLY39 VAL40 THR41 ILE42 VAL43 VAL44 ALA45 PRO46 GLN47 LEU48 VAL49 ASP50 LEU51 ARG52 MET53 ILE54 ALA55 GLU56 SER57 VAL58 GLU59 ILE60 PRO61 VAL62 PHE63 ALA64 GLN65 HIS66 ILE67 ASP68 PRO69 ILE70 LYS71 PRO72 GLY73 SER74 HIS75 THR76 GLY77 HIS78 VAL79 LEU80 PRO81 GLU82 ALA83 VAL84 LYS85 GLU86 ALA87 GLY88 ALA89 VAL90 GLY91 THR92 LEU93 LEU94 ASN95 HIS96 SER97 GLU98 ASN99 ARG100 MET101 ILE102 LEU103 ALA104 ASP105 LEU106 GLU107 ALA108 ALA109 ILE110 ARG111 ARG112 ALA113 GLU114 GLU115 VAL116 GLY117 LEU118 MET119 THR120 MET121 VAL122 CYS123 SER124 ASN125 ASN126 PRO127 ALA128 VAL129 SER130 ALA131 ALA132 VAL133 ALA134 ALA135 LEU136 ASN137 PRO138 ASP139 TYR140 VAL141 ALA142 VAL143 GLU144 PRO145 PRO146 GLU147 LEU148 ILE149 GLY150 THR151 GLY152 ILE153 PRO154 VAL155 SER156 LYS157 ALA158 LYS159 PRO160 GLU161 VAL162 ILE163 THR164 ASN165 THR166 VAL167 GLU168 LEU169 VAL170 LYS171 LYS172 VAL173 ASN174 PRO175 GLU176 VAL177 LYS178 VAL179 LEU180 CYS181 GLY182 ALA183 GLY184 ILE185 SER186 THR187 GLY188 GLU189 ASP190 VAL191 LYS192 LYS193 ALA194 ILE195 GLU196 LEU197 GLY198 THR199 VAL200 GLY201 VAL202 LEU203 LEU204 ALA205 SER206 GLY207 VAL208 THR209 LYS210 ALA211 LYS212 ASP213 PRO214 GLU215 LYS216 ALA217 ILE218 TRP219 ASP220 LEU221 VAL222 SER223 GLY224 ILE225
Unit 8 ALA2 LYS3 LEU4 LYS5 GLU6 PRO7 ILE8 ILE9 ALA10 ILE11 ASN12 PHE13 LYS14 THR15 TYR16 ILE17 GLU18 ALA19 THR20 GLY21 LYS22 ARG23 ALA24 LEU25 GLU26 ILE27 ALA28 LYS29 ALA30 ALA31 GLU32 LYS33 VAL34 TYR35 LYS36 GLU37 THR38 GLY39 VAL40 THR41 ILE42 VAL43 VAL44 ALA45 PRO46 GLN47 LEU48 VAL49 ASP50 LEU51 ARG52 MET53 ILE54 ALA55 GLU56 SER57 VAL58 GLU59 ILE60 PRO61 VAL62 PHE63 ALA64 GLN65 HIS66 ILE67 ASP68 PRO69 ILE70 LYS71 PRO72 GLY73 SER74 HIS75 THR76 GLY77 HIS78 VAL79 LEU80 PRO81 GLU82 ALA83 VAL84 LYS85 GLU86 ALA87 GLY88 ALA89 VAL90 GLY91 THR92 LEU93 LEU94 ASN95 HIS96 SER97 GLU98 ASN99 ARG100 MET101 ILE102 LEU103 ALA104 ASP105 LEU106 GLU107 ALA108 ALA109 ILE110 ARG111 ARG112 ALA113 GLU114 GLU115 VAL116 GLY117 LEU118 MET119 THR120 MET121 VAL122 CYS123 SER124 ASN125 ASN126 PRO127 ALA128 VAL129 SER130 ALA131 ALA132 VAL133 ALA134 ALA135 LEU136 ASN137 PRO138 ASP139 TYR140 VAL141 ALA142 VAL143 GLU144 PRO145 PRO146 GLU147 LEU148 ILE149 GLY150 THR151 GLY152 ILE153 PRO154 VAL155 SER156 LYS157 ALA158 LYS159 PRO160 GLU161 VAL162 ILE163 THR164 ASN165 THR166 VAL167 GLU168 LEU169 VAL170 LYS171 LYS172 VAL173 ASN174 PRO175 GLU176 VAL177 LYS178 VAL179 LEU180 CYS181 GLY182 ALA183 GLY184 ILE185 SER186 THR187 GLY188 GLU189 ASP190 VAL191 LYS192 LYS193 ALA194 ILE195 GLU196 LEU197 GLY198 THR199 VAL200 GLY201 VAL202 LEU203 LEU204 ALA205 SER206 GLY207 VAL208 THR209 LYS210 ALA211 LYS212 ASP213 PRO214 GLU215 LYS216 ALA217 ILE218 TRP219 ASP220 LEU221 VAL222 SER223 GLY224 ILE225

Ligands
Unit 9 3PP1226
Unit 10 3PP1226
Unit 11 3PP1226
Unit 12 3PP1226
Unit 13 3PP1226
Unit 14 3PP1226
Unit 15 3PP1226
Unit 16 3PP1226

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany