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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TRKB-D5 BOUND TO NEUROTROPHIN-4/5
Keywords TRANSFERASE/HORMONE, COMPLEX(TRANSFERASE/GROWTH FACTOR), NEUROTROPHIN-4/5, TRKB RECEPTOR, NGF-BETA SUPERFAMILY, IMMUNOGLOBULIN DOMAIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1HCF     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NEUROTROPHIN-4  A 121 893 0
2  Protein   NEUROTROPHIN-4  B 121 909 0
3  Protein    X 101 809 0
4  Protein   BDNF/NT-3 GROWTH FACTORS RECEPTOR  Y 101 808 0
5  Ligand   NEUROTROPHIN-4  A 1 0 5
6  Ligand   NEUROTROPHIN-4  B 3 0 15
7 Water     60 0 60
total       508 3419 80

Proteins
Unit 1 GLY1 VAL2 SER3 GLU4 THR5 ALA6 PRO7 ALA8 SER9 ARG10 ARG11 GLY12 GLU13 LEU14 ALA15 VAL16 CYS17 ASP18 ALA19 VAL20 SER21 GLY22 TRP23 VAL24 THR25 ASP26 ARG27 ARG28 THR29 ALA30 VAL31 ASP32 LEU33 ARG34 GLY35 ARG36 GLU37 VAL38 GLU39 VAL40 LEU41 GLY42 GLU43 VAL44 PRO45 ALA46 ALA47 GLY48 GLY49 SER50 PRO51 LEU52 ARG53 GLN54 TYR55 PHE56 PHE57 GLU58 THR59 ARG60 CYS61 LYS62 ALA63 ASP64 PRO71 GLY72 ALA73 GLY74 GLY75 GLY76 GLY77 CYS78 ARG79 GLY80 VAL81 ASP82 ARG83 ARG84 HIS85 TRP86 VAL87 SER88 GLU89 CYS90 LYS91 ALA92 LYS93 GLN94 SER95 TYR96 VAL97 ARG98 ALA99 LEU100 THR101 ALA102 ASP103 ALA104 GLN105 GLY106 ARG107 VAL108 GLY109 TRP110 ARG111 TRP112 ILE113 ARG114 ILE115 ASP116 THR117 ALA118 CYS119 VAL120 CYS121 THR122 LEU123 LEU124 SER125 ARG126 THR127
Unit 2 THR5 ALA6 PRO7 ALA8 SER9 ARG10 ARG11 GLY12 GLU13 LEU14 ALA15 VAL16 CYS17 ASP18 ALA19 VAL20 SER21 GLY22 TRP23 VAL24 THR25 ASP26 ARG27 ARG28 THR29 ALA30 VAL31 ASP32 LEU33 ARG34 GLY35 ARG36 GLU37 VAL38 GLU39 VAL40 LEU41 GLY42 GLU43 VAL44 PRO45 ALA46 ALA47 SER50 PRO51 LEU52 ARG53 GLN54 TYR55 PHE56 PHE57 GLU58 THR59 ARG60 CYS61 LYS62 ALA63 ASP64 ALA66 GLU67 GLU68 GLY69 GLY70 PRO71 GLY72 ALA73 GLY74 GLY75 GLY76 GLY77 CYS78 ARG79 GLY80 VAL81 ASP82 ARG83 ARG84 HIS85 TRP86 VAL87 SER88 GLU89 CYS90 LYS91 ALA92 LYS93 GLN94 SER95 TYR96 VAL97 ARG98 ALA99 LEU100 THR101 ALA102 ASP103 ALA104 GLN105 GLY106 ARG107 VAL108 GLY109 TRP110 ARG111 TRP112 ILE113 ARG114 ILE115 ASP116 THR117 ALA118 CYS119 VAL120 CYS121 THR122 LEU123 LEU124 SER125 ARG126 THR127 GLY128
Unit 3 SER283 HIS284 MET285 ALA286 PRO287 THR288 ILE289 THR290 PHE291 LEU292 GLU293 SER294 PRO295 THR296 SER297 ASP298 HIS299 HIS300 TRP301 CYS302 ILE303 PRO304 PHE305 THR306 VAL307 LYS308 GLY309 ASN310 PRO311 LYS312 PRO313 ALA314 LEU315 GLN316 TRP317 PHE318 TYR319 ASN320 GLY321 ALA322 ILE323 LEU324 ASN325 GLU326 SER327 LYS328 TYR329 ILE330 CYS331 THR332 LYS333 ILE334 HIS335 VAL336 THR337 ASN338 HIS339 THR340 GLU341 TYR342 HIS343 GLY344 CYS345 LEU346 GLN347 LEU348 ASP349 ASN350 PRO351 THR352 HIS353 MET354 ASN355 ASN356 GLY357 ASP358 TYR359 THR360 LEU361 ILE362 ALA363 LYS364 ASN365 GLU366 TYR367 GLY368 LYS369 ASP370 GLU371 LYS372 GLN373 ILE374 SER375 ALA376 HIS377 PHE378 MET379 GLY380 TRP381 PRO382 GLY383
Unit 4 SER283 HIS284 MET285 ALA286 PRO287 THR288 ILE289 THR290 PHE291 LEU292 GLU293 SER294 PRO295 THR296 SER297 ASP298 HIS299 HIS300 TRP301 CYS302 ILE303 PRO304 PHE305 THR306 VAL307 LYS308 GLY309 ASN310 PRO311 LYS312 PRO313 ALA314 LEU315 GLN316 TRP317 PHE318 TYR319 ASN320 GLY321 ALA322 ILE323 LEU324 ASN325 GLU326 SER327 LYS328 TYR329 ILE330 CYS331 THR332 LYS333 ILE334 HIS335 VAL336 THR337 ASN338 HIS339 THR340 GLU341 TYR342 HIS343 GLY344 CYS345 LEU346 GLN347 LEU348 ASP349 ASN350 PRO351 THR352 HIS353 MET354 ASN355 ASN356 GLY357 ASP358 TYR359 THR360 LEU361 ILE362 ALA363 LYS364 ASN365 GLU366 TYR367 GLY368 LYS369 ASP370 GLU371 LYS372 GLN373 ILE374 SER375 ALA376 HIS377 PHE378 MET379 GLY380 TRP381 PRO382 GLY383

Ligands
Unit 5 SO41128
Unit 6 SO41129 SO41130 SO41131

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany