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Sequence, Chains, Asymmetric and Biological Units

Title (3R)-HYDROXYACYL-COA DEHYDROGENASE FRAGMENT OF RAT PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE 2
Keywords DEHYDROGENASE, 17BETA-HSD4, MFE-2, BETA-OXIDATION, PEROXISOME, SDR, STEROID BIOSYNTHESIS, OXIDOREDUCTASE, NADP, MULTIGENE FAMIL
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1GZ6     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ESTRADIOL 17 BETA-DEHYDROGENASE 4  A 302 2262 40
2  Protein   ESTRADIOL 17 BETA-DEHYDROGENASE 4  B 279 2111 24
3  Protein   ESTRADIOL 17 BETA-DEHYDROGENASE 4  C 288 2180 24
4  Protein   ESTRADIOL 17 BETA-DEHYDROGENASE 4  D 302 2262 40
5  Ligand   ESTRADIOL 17 BETA-DEHYDROGENASE 4  A 4 0 59
6  Ligand   ESTRADIOL 17 BETA-DEHYDROGENASE 4  B 1 0 44
7  Ligand   ESTRADIOL 17 BETA-DEHYDROGENASE 4  C 1 0 44
8  Ligand   ESTRADIOL 17 BETA-DEHYDROGENASE 4  D 3 0 54
9 Water     817 0 817
total       1997 8815 1146

Proteins
Unit 1 SER3 PRO4 LEU5 ARG6 PHE7 ASP8 GLY9 ARG10 VAL11 VAL12 LEU13 VAL14 THR15 GLY16 ALA17 GLY18 GLY19 GLY20 LEU21 GLY22 ARG23 ALA24 TYR25 ALA26 LEU27 ALA28 PHE29 ALA30 GLU31 ARG32 GLY33 ALA34 LEU35 VAL36 VAL37 VAL38 ASN39 ASP40 LEU41 GLY42 GLY43 ASP44 PHE45 LYS46 GLY47 VAL48 GLY49 LYS50 GLY51 SER52 SER53 ALA54 ALA55 ASP56 LYS57 VAL58 VAL59 GLU60 GLU61 ILE62 ARG63 ARG64 ARG65 GLY66 GLY67 LYS68 ALA69 VAL70 ALA71 ASN72 TYR73 ASP74 SER75 VAL76 GLU77 ALA78 GLY79 GLU80 LYS81 LEU82 VAL83 LYS84 THR85 ALA86 LEU87 ASP88 THR89 PHE90 GLY91 ARG92 ILE93 ASP94 VAL95 VAL96 VAL97 ASN98 ASN99 ALA100 GLY101 ILE102 LEU103 ARG104 ASP105 ARG106 SER107 PHE108 SER109 ARG110 ILE111 SER112 ASP113 GLU114 ASP115 TRP116 ASP117 ILE118 ILE119 GLN120 ARG121 VAL122 HIS123 LEU124 ARG125 GLY126 SER127 PHE128 GLN129 VAL130 THR131 ARG132 ALA133 ALA134 TRP135 ASP136 HIS137 MSE138 LYS139 LYS140 GLN141 ASN142 TYR143 GLY144 ARG145 ILE146 ILE147 MSE148 THR149 ALA150 SER151 ALA152 SER153 GLY154 ILE155 TYR156 GLY157 ASN158 PHE159 GLY160 GLN161 ALA162 ASN163 TYR164 SER165 ALA166 ALA167 LYS168 LEU169 GLY170 LEU171 LEU172 GLY173 LEU174 ALA175 ASN176 THR177 LEU178 VAL179 ILE180 GLU181 GLY182 ARG183 LYS184 ASN185 ASN186 ILE187 HIS188 CYS189 ASN190 THR191 ILE192 ALA193 PRO194 ASN195 ALA196 GLY197 SER198 ARG199 MSE200 THR201 GLU202 THR203 VAL204 MSE205 PRO206 GLU207 ASP208 LEU209 VAL210 GLU211 ALA212 LEU213 LYS214 PRO215 GLU216 TYR217 VAL218 ALA219 PRO220 LEU221 VAL222 LEU223 TRP224 LEU225 CYS226 HIS227 GLU228 SER229 CYS230 GLU231 GLU232 ASN233 GLY234 GLY235 LEU236 PHE237 GLU238 VAL239 GLY240 ALA241 GLY242 TRP243 ILE244 GLY245 LYS246 LEU247 ARG248 TRP249 GLU250 ARG251 THR252 LEU253 GLY254 ALA255 ILE256 VAL257 ARG258 LYS259 ARG260 ASN261 GLN262 PRO263 MSE264 THR265 PRO266 GLU267 ALA268 VAL269 ARG270 ASP271 ASN272 TRP273 VAL274 LYS275 ILE276 CYS277 ASP278 PHE279 SER280 ASN281 ALA282 SER283 LYS284 PRO285 LYS286 SER287 ILE288 GLN289 GLU290 SER291 THR292 GLY293 GLY294 ILE295 ILE296 GLU297 VAL298 LEU299 HIS300 LYS301 ILE302 ASP303 SER304
Unit 2 SER3 PRO4 LEU5 ARG6 PHE7 ASP8 GLY9 ARG10 VAL11 VAL12 LEU13 VAL14 THR15 GLY16 ALA17 GLY18 GLY19 GLY20 LEU21 GLY22 ARG23 ALA24 TYR25 ALA26 LEU27 ALA28 PHE29 ALA30 GLU31 ARG32 GLY33 ALA34 LEU35 VAL36 VAL37 VAL38 ASN39 ASP40 LEU41 GLY42 GLY43 SER52 SER53 ALA54 ALA55 ASP56 LYS57 VAL58 VAL59 GLU60 GLU61 ILE62 ARG63 ARG64 ARG65 GLY66 GLY67 LYS68 ALA69 VAL70 ALA71 ASN72 TYR73 ASP74 SER75 VAL76 GLU77 ALA78 GLY79 GLU80 LYS81 LEU82 VAL83 LYS84 THR85 ALA86 LEU87 ASP88 THR89 PHE90 GLY91 ARG92 ILE93 ASP94 VAL95 VAL96 VAL97 ASN98 ASN99 ALA100 GLY101 ILE102 LEU103 ARG104 ASP105 ARG106 SER107 PHE108 SER109 ARG110 ILE111 SER112 ASP113 GLU114 ASP115 TRP116 ASP117 ILE118 ILE119 GLN120 ARG121 VAL122 HIS123 LEU124 ARG125 GLY126 SER127 PHE128 GLN129 VAL130 THR131 ARG132 ALA133 ALA134 TRP135 ASP136 HIS137 MSE138 LYS139 LYS140 GLN141 ASN142 TYR143 GLY144 ARG145 ILE146 ILE147 MSE148 THR149 ALA150 SER151 ALA152 SER153 GLY154 ILE155 TYR156 GLY157 ASN158 PHE159 GLY160 GLN161 ALA162 ASN163 TYR164 SER165 ALA166 ALA167 LYS168 LEU169 GLY170 LEU171 LEU172 GLY173 LEU174 ALA175 ASN176 THR177 LEU178 VAL179 ILE180 GLU181 GLY182 ARG183 LYS184 ASN185 ASN186 ILE187 HIS188 CYS189 ASN190 THR191 ILE192 ALA193 PRO194 ASN195 GLU211 ALA212 LEU213 LYS214 PRO215 GLU216 TYR217 VAL218 ALA219 PRO220 LEU221 VAL222 LEU223 TRP224 LEU225 CYS226 HIS227 GLU228 SER229 CYS230 GLU231 GLU232 ASN233 GLY234 GLY235 LEU236 PHE237 GLU238 VAL239 GLY240 ALA241 GLY242 TRP243 ILE244 GLY245 LYS246 LEU247 ARG248 TRP249 GLU250 ARG251 THR252 LEU253 GLY254 ALA255 ILE256 VAL257 ARG258 LYS259 ARG260 ASN261 GLN262 PRO263 MSE264 THR265 PRO266 GLU267 ALA268 VAL269 ARG270 ASP271 ASN272 TRP273 VAL274 LYS275 ILE276 CYS277 ASP278 PHE279 SER280 ASN281 ALA282 SER283 LYS284 PRO285 LYS286 SER287 ILE288 GLN289 GLU290 SER291 THR292 GLY293 GLY294 ILE295 ILE296 GLU297 VAL298 LEU299 HIS300 LYS301 ILE302 ASP303 SER304
Unit 3 PRO4 LEU5 ARG6 PHE7 ASP8 GLY9 ARG10 VAL11 VAL12 LEU13 VAL14 THR15 GLY16 ALA17 GLY18 GLY19 GLY20 LEU21 GLY22 ARG23 ALA24 TYR25 ALA26 LEU27 ALA28 PHE29 ALA30 GLU31 ARG32 GLY33 ALA34 LEU35 VAL36 VAL37 VAL38 ASN39 ASP40 LEU41 GLY42 GLY43 ASP44 PHE45 LYS46 GLY47 VAL48 GLY49 LYS50 SER52 SER53 ALA54 ALA55 ASP56 LYS57 VAL58 VAL59 GLU60 GLU61 ILE62 ARG63 ARG64 ARG65 GLY66 GLY67 LYS68 ALA69 VAL70 ALA71 ASN72 TYR73 ASP74 SER75 VAL76 GLU77 ALA78 GLY79 GLU80 LYS81 LEU82 VAL83 LYS84 THR85 ALA86 LEU87 ASP88 THR89 PHE90 GLY91 ARG92 ILE93 ASP94 VAL95 VAL96 VAL97 ASN98 ASN99 ALA100 GLY101 ILE102 LEU103 ARG104 ASP105 ARG106 SER107 PHE108 SER109 ARG110 ILE111 SER112 ASP113 GLU114 ASP115 TRP116 ASP117 ILE118 ILE119 GLN120 ARG121 VAL122 HIS123 LEU124 ARG125 GLY126 SER127 PHE128 GLN129 VAL130 THR131 ARG132 ALA133 ALA134 TRP135 ASP136 HIS137 MSE138 LYS139 LYS140 GLN141 ASN142 TYR143 GLY144 ARG145 ILE146 ILE147 MSE148 THR149 ALA150 SER151 ALA152 SER153 GLY154 ILE155 TYR156 GLY157 ASN158 PHE159 GLY160 GLN161 ALA162 ASN163 TYR164 SER165 ALA166 ALA167 LYS168 LEU169 GLY170 LEU171 LEU172 GLY173 LEU174 ALA175 ASN176 THR177 LEU178 VAL179 ILE180 GLU181 GLY182 ARG183 LYS184 ASN185 ASN186 ILE187 HIS188 CYS189 ASN190 THR191 ILE192 ALA193 PRO194 ASN195 ASP208 LEU209 VAL210 GLU211 ALA212 LEU213 LYS214 PRO215 GLU216 TYR217 VAL218 ALA219 PRO220 LEU221 VAL222 LEU223 TRP224 LEU225 CYS226 HIS227 GLU228 SER229 CYS230 GLU231 GLU232 ASN233 GLY234 GLY235 LEU236 PHE237 GLU238 VAL239 GLY240 ALA241 GLY242 TRP243 ILE244 GLY245 LYS246 LEU247 ARG248 TRP249 GLU250 ARG251 THR252 LEU253 GLY254 ALA255 ILE256 VAL257 ARG258 LYS259 ARG260 ASN261 GLN262 PRO263 MSE264 THR265 PRO266 GLU267 ALA268 VAL269 ARG270 ASP271 ASN272 TRP273 VAL274 LYS275 ILE276 CYS277 ASP278 PHE279 SER280 ASN281 ALA282 SER283 LYS284 PRO285 LYS286 SER287 ILE288 GLN289 GLU290 SER291 THR292 GLY293 GLY294 ILE295 ILE296 GLU297 VAL298 LEU299 HIS300 LYS301 ILE302 ASP303 SER304
Unit 4 SER3 PRO4 LEU5 ARG6 PHE7 ASP8 GLY9 ARG10 VAL11 VAL12 LEU13 VAL14 THR15 GLY16 ALA17 GLY18 GLY19 GLY20 LEU21 GLY22 ARG23 ALA24 TYR25 ALA26 LEU27 ALA28 PHE29 ALA30 GLU31 ARG32 GLY33 ALA34 LEU35 VAL36 VAL37 VAL38 ASN39 ASP40 LEU41 GLY42 GLY43 ASP44 PHE45 LYS46 GLY47 VAL48 GLY49 LYS50 GLY51 SER52 SER53 ALA54 ALA55 ASP56 LYS57 VAL58 VAL59 GLU60 GLU61 ILE62 ARG63 ARG64 ARG65 GLY66 GLY67 LYS68 ALA69 VAL70 ALA71 ASN72 TYR73 ASP74 SER75 VAL76 GLU77 ALA78 GLY79 GLU80 LYS81 LEU82 VAL83 LYS84 THR85 ALA86 LEU87 ASP88 THR89 PHE90 GLY91 ARG92 ILE93 ASP94 VAL95 VAL96 VAL97 ASN98 ASN99 ALA100 GLY101 ILE102 LEU103 ARG104 ASP105 ARG106 SER107 PHE108 SER109 ARG110 ILE111 SER112 ASP113 GLU114 ASP115 TRP116 ASP117 ILE118 ILE119 GLN120 ARG121 VAL122 HIS123 LEU124 ARG125 GLY126 SER127 PHE128 GLN129 VAL130 THR131 ARG132 ALA133 ALA134 TRP135 ASP136 HIS137 MSE138 LYS139 LYS140 GLN141 ASN142 TYR143 GLY144 ARG145 ILE146 ILE147 MSE148 THR149 ALA150 SER151 ALA152 SER153 GLY154 ILE155 TYR156 GLY157 ASN158 PHE159 GLY160 GLN161 ALA162 ASN163 TYR164 SER165 ALA166 ALA167 LYS168 LEU169 GLY170 LEU171 LEU172 GLY173 LEU174 ALA175 ASN176 THR177 LEU178 VAL179 ILE180 GLU181 GLY182 ARG183 LYS184 ASN185 ASN186 ILE187 HIS188 CYS189 ASN190 THR191 ILE192 ALA193 PRO194 ASN195 ALA196 GLY197 SER198 ARG199 MSE200 THR201 GLU202 THR203 VAL204 MSE205 PRO206 GLU207 ASP208 LEU209 VAL210 GLU211 ALA212 LEU213 LYS214 PRO215 GLU216 TYR217 VAL218 ALA219 PRO220 LEU221 VAL222 LEU223 TRP224 LEU225 CYS226 HIS227 GLU228 SER229 CYS230 GLU231 GLU232 ASN233 GLY234 GLY235 LEU236 PHE237 GLU238 VAL239 GLY240 ALA241 GLY242 TRP243 ILE244 GLY245 LYS246 LEU247 ARG248 TRP249 GLU250 ARG251 THR252 LEU253 GLY254 ALA255 ILE256 VAL257 ARG258 LYS259 ARG260 ASN261 GLN262 PRO263 MSE264 THR265 PRO266 GLU267 ALA268 VAL269 ARG270 ASP271 ASN272 TRP273 VAL274 LYS275 ILE276 CYS277 ASP278 PHE279 SER280 ASN281 ALA282 SER283 LYS284 PRO285 LYS286 SER287 ILE288 GLN289 GLU290 SER291 THR292 GLY293 GLY294 ILE295 ILE296 GLU297 VAL298 LEU299 HIS300 LYS301 ILE302 ASP303 SER304

Ligands
Unit 5 SO41303 SO41304 SO41305 NAI1306
Unit 6 NAI1304
Unit 7 NAI1304
Unit 8 SO41303 SO41304 NAI1305

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany