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Sequence, Chains, Asymmetric and Biological Units

Title 23S RIBOSOMAL RNA G2251 2'O-METHYLTRANSFERASE RLMB
Keywords TRANSFERASE, METHYLTRANSFERASE, 2'O-METHYLTRANSFERASE, KNOT, MONTREAL- KINGSTON BACTERIAL STRUCTURAL GENOMICS INITIATIVE, BSGI, STRUCTURAL GENOMICS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1GZ0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH  A 242 1795 56
2  Protein   HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH  B 244 1805 64
3  Protein   HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH  C 242 1795 56
4  Protein   HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH  D 244 1805 64
5  Protein   HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH  E 166 1200 48
6  Protein   HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH  F 253 1864 64
7  Protein   HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH  G 166 1200 48
8  Protein   HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH  H 250 1848 64
9 Water     177 0 177
total       1984 13312 641

Proteins
Unit 1 SER2 GLU3 MSE4 ILE5 TYR6 GLY7 ILE8 HIS9 ALA10 VAL11 GLN12 ALA13 LEU14 LEU15 GLU16 ARG17 ALA18 PRO19 GLU20 ARG21 PHE22 GLN23 GLU24 VAL25 PHE26 ILE27 LEU28 LYS29 GLY30 ARG31 GLU32 ASP33 LYS34 ARG35 LEU36 LEU37 PRO38 LEU39 ILE40 HIS41 ALA42 LEU43 GLU44 SER45 GLN46 GLY47 VAL48 VAL49 ILE50 GLN51 LEU52 ALA53 ASN54 ARG55 GLN56 TYR57 LEU58 ASP59 GLU60 LYS61 SER62 ASP63 GLY64 ALA65 VAL66 HIS67 GLN68 GLY69 ILE70 ILE71 ALA72 ARG73 VAL74 LYS75 PRO76 GLY77 ARG78 GLN79 TYR80 GLN81 GLU82 ASN83 ASP84 LEU85 PRO86 ASP87 LEU88 ILE89 ALA90 SER91 LEU92 ASP93 GLN94 PRO95 PHE96 LEU97 LEU98 ILE99 LEU100 ASP101 GLY102 VAL103 THR104 ASP105 PRO106 HIS107 ASN108 LEU109 GLY110 ALA111 CYS112 LEU113 ARG114 SER115 ALA116 ASP117 ALA118 ALA119 GLY120 VAL121 HIS122 ALA123 VAL124 ILE125 VAL126 PRO127 LYS128 ASP129 ARG130 SER131 ALA132 GLN133 LEU134 ASN135 ALA136 THR137 ALA138 LYS139 LYS140 VAL141 ALA142 CYS143 GLY144 ALA145 ALA146 GLU147 SER148 VAL149 PRO150 LEU151 ILE152 ARG153 VAL154 THR155 ASN156 LEU157 ALA158 ARG159 THR160 MSE161 ARG162 MSE163 LEU164 GLN165 GLU166 GLU167 ASN168 ILE169 TRP170 ILE171 VAL172 GLY173 THR174 ALA175 GLY176 GLU177 ALA178 ASP179 HIS180 THR181 LEU182 TYR183 GLN184 SER185 LYS186 MSE187 THR188 GLY189 ARG190 LEU191 ALA192 LEU193 VAL194 MSE195 GLY196 ALA197 GLU198 GLY199 GLU200 GLY201 MSE202 ARG203 ARG204 LEU205 THR206 ARG207 GLU208 HIS209 CYS210 ASP211 GLU212 LEU213 ILE214 SER215 ILE216 PRO217 MSE218 ALA219 GLY220 SER221 VAL222 SER223 SER224 LEU225 ASN226 VAL227 SER228 VAL229 ALA230 THR231 GLY232 ILE233 CYS234 LEU235 PHE236 GLU237 ALA238 VAL239 ARG240 GLN241 ARG242 SER243
Unit 2 HIS-1 MSE1 SER2 GLU3 MSE4 ILE5 TYR6 GLY7 ILE8 HIS9 ALA10 VAL11 GLN12 ALA13 LEU14 LEU15 GLU16 ARG17 ALA18 PRO19 GLU20 ARG21 PHE22 GLN23 GLU24 VAL25 PHE26 ILE27 LEU28 LYS29 GLY30 ARG31 GLU32 ASP33 LYS34 ARG35 LEU36 LEU37 PRO38 LEU39 ILE40 HIS41 ALA42 LEU43 GLU44 SER45 GLN46 GLY47 VAL48 VAL49 ILE50 GLN51 LEU52 ALA53 ASN54 ARG55 GLN56 TYR57 LEU58 ASP59 GLU60 LYS61 SER62 ASP63 GLY64 ALA65 VAL66 HIS67 GLN68 GLY69 ILE70 ILE71 ALA72 ARG73 VAL74 LYS75 PRO76 GLY77 ARG78 GLN79 TYR80 GLN81 GLU82 ASN83 ASP84 LEU85 PRO86 ASP87 LEU88 ILE89 ALA90 SER91 LEU92 ASP93 GLN94 PRO95 PHE96 LEU97 LEU98 ILE99 LEU100 ASP101 GLY102 VAL103 THR104 ASP105 PRO106 HIS107 ASN108 LEU109 GLY110 ALA111 CYS112 LEU113 ARG114 SER115 ALA116 ASP117 ALA118 ALA119 GLY120 VAL121 HIS122 ALA123 VAL124 ILE125 VAL126 PRO127 LYS128 ASP129 ARG130 SER131 ALA132 GLN133 LEU134 ASN135 ALA136 THR137 ALA138 LYS139 LYS140 VAL141 ALA142 CYS143 GLY144 ALA145 ALA146 GLU147 SER148 VAL149 PRO150 LEU151 ILE152 ARG153 VAL154 THR155 ASN156 LEU157 ALA158 ARG159 THR160 MSE161 ARG162 MSE163 LEU164 GLN165 GLU166 GLU167 ASN168 ILE169 TRP170 ILE171 VAL172 GLY173 THR174 ALA175 GLY176 GLU177 ALA178 ASP179 HIS180 THR181 LEU182 TYR183 GLN184 SER185 LYS186 MSE187 THR188 GLY189 ARG190 LEU191 ALA192 LEU193 VAL194 MSE195 GLY196 ALA197 GLU198 GLY199 GLU200 GLY201 MSE202 ARG203 ARG204 LEU205 THR206 ARG207 GLU208 HIS209 CYS210 ASP211 GLU212 LEU213 ILE214 SER215 ILE216 PRO217 MSE218 ALA219 GLY220 SER221 VAL222 SER223 SER224 LEU225 ASN226 VAL227 SER228 VAL229 ALA230 THR231 GLY232 ILE233 CYS234 LEU235 PHE236 GLU237 ALA238 VAL239 ARG240 GLN241 ARG242 SER243
Unit 3 SER2 GLU3 MSE4 ILE5 TYR6 GLY7 ILE8 HIS9 ALA10 VAL11 GLN12 ALA13 LEU14 LEU15 GLU16 ARG17 ALA18 PRO19 GLU20 ARG21 PHE22 GLN23 GLU24 VAL25 PHE26 ILE27 LEU28 LYS29 GLY30 ARG31 GLU32 ASP33 LYS34 ARG35 LEU36 LEU37 PRO38 LEU39 ILE40 HIS41 ALA42 LEU43 GLU44 SER45 GLN46 GLY47 VAL48 VAL49 ILE50 GLN51 LEU52 ALA53 ASN54 ARG55 GLN56 TYR57 LEU58 ASP59 GLU60 LYS61 SER62 ASP63 GLY64 ALA65 VAL66 HIS67 GLN68 GLY69 ILE70 ILE71 ALA72 ARG73 VAL74 LYS75 PRO76 GLY77 ARG78 GLN79 TYR80 GLN81 GLU82 ASN83 ASP84 LEU85 PRO86 ASP87 LEU88 ILE89 ALA90 SER91 LEU92 ASP93 GLN94 PRO95 PHE96 LEU97 LEU98 ILE99 LEU100 ASP101 GLY102 VAL103 THR104 ASP105 PRO106 HIS107 ASN108 LEU109 GLY110 ALA111 CYS112 LEU113 ARG114 SER115 ALA116 ASP117 ALA118 ALA119 GLY120 VAL121 HIS122 ALA123 VAL124 ILE125 VAL126 PRO127 LYS128 ASP129 ARG130 SER131 ALA132 GLN133 LEU134 ASN135 ALA136 THR137 ALA138 LYS139 LYS140 VAL141 ALA142 CYS143 GLY144 ALA145 ALA146 GLU147 SER148 VAL149 PRO150 LEU151 ILE152 ARG153 VAL154 THR155 ASN156 LEU157 ALA158 ARG159 THR160 MSE161 ARG162 MSE163 LEU164 GLN165 GLU166 GLU167 ASN168 ILE169 TRP170 ILE171 VAL172 GLY173 THR174 ALA175 GLY176 GLU177 ALA178 ASP179 HIS180 THR181 LEU182 TYR183 GLN184 SER185 LYS186 MSE187 THR188 GLY189 ARG190 LEU191 ALA192 LEU193 VAL194 MSE195 GLY196 ALA197 GLU198 GLY199 GLU200 GLY201 MSE202 ARG203 ARG204 LEU205 THR206 ARG207 GLU208 HIS209 CYS210 ASP211 GLU212 LEU213 ILE214 SER215 ILE216 PRO217 MSE218 ALA219 GLY220 SER221 VAL222 SER223 SER224 LEU225 ASN226 VAL227 SER228 VAL229 ALA230 THR231 GLY232 ILE233 CYS234 LEU235 PHE236 GLU237 ALA238 VAL239 ARG240 GLN241 ARG242 SER243
Unit 4 HIS-1 MSE1 SER2 GLU3 MSE4 ILE5 TYR6 GLY7 ILE8 HIS9 ALA10 VAL11 GLN12 ALA13 LEU14 LEU15 GLU16 ARG17 ALA18 PRO19 GLU20 ARG21 PHE22 GLN23 GLU24 VAL25 PHE26 ILE27 LEU28 LYS29 GLY30 ARG31 GLU32 ASP33 LYS34 ARG35 LEU36 LEU37 PRO38 LEU39 ILE40 HIS41 ALA42 LEU43 GLU44 SER45 GLN46 GLY47 VAL48 VAL49 ILE50 GLN51 LEU52 ALA53 ASN54 ARG55 GLN56 TYR57 LEU58 ASP59 GLU60 LYS61 SER62 ASP63 GLY64 ALA65 VAL66 HIS67 GLN68 GLY69 ILE70 ILE71 ALA72 ARG73 VAL74 LYS75 PRO76 GLY77 ARG78 GLN79 TYR80 GLN81 GLU82 ASN83 ASP84 LEU85 PRO86 ASP87 LEU88 ILE89 ALA90 SER91 LEU92 ASP93 GLN94 PRO95 PHE96 LEU97 LEU98 ILE99 LEU100 ASP101 GLY102 VAL103 THR104 ASP105 PRO106 HIS107 ASN108 LEU109 GLY110 ALA111 CYS112 LEU113 ARG114 SER115 ALA116 ASP117 ALA118 ALA119 GLY120 VAL121 HIS122 ALA123 VAL124 ILE125 VAL126 PRO127 LYS128 ASP129 ARG130 SER131 ALA132 GLN133 LEU134 ASN135 ALA136 THR137 ALA138 LYS139 LYS140 VAL141 ALA142 CYS143 GLY144 ALA145 ALA146 GLU147 SER148 VAL149 PRO150 LEU151 ILE152 ARG153 VAL154 THR155 ASN156 LEU157 ALA158 ARG159 THR160 MSE161 ARG162 MSE163 LEU164 GLN165 GLU166 GLU167 ASN168 ILE169 TRP170 ILE171 VAL172 GLY173 THR174 ALA175 GLY176 GLU177 ALA178 ASP179 HIS180 THR181 LEU182 TYR183 GLN184 SER185 LYS186 MSE187 THR188 GLY189 ARG190 LEU191 ALA192 LEU193 VAL194 MSE195 GLY196 ALA197 GLU198 GLY199 GLU200 GLY201 MSE202 ARG203 ARG204 LEU205 THR206 ARG207 GLU208 HIS209 CYS210 ASP211 GLU212 LEU213 ILE214 SER215 ILE216 PRO217 MSE218 ALA219 GLY220 SER221 VAL222 SER223 SER224 LEU225 ASN226 VAL227 SER228 VAL229 ALA230 THR231 GLY232 ILE233 CYS234 LEU235 PHE236 GLU237 ALA238 VAL239 ARG240 GLN241 ARG242 SER243
Unit 5 ARG78 GLN79 TYR80 GLN81 GLU82 ASN83 ASP84 LEU85 PRO86 ASP87 LEU88 ILE89 ALA90 SER91 LEU92 ASP93 GLN94 PRO95 PHE96 LEU97 LEU98 ILE99 LEU100 ASP101 GLY102 VAL103 THR104 ASP105 PRO106 HIS107 ASN108 LEU109 GLY110 ALA111 CYS112 LEU113 ARG114 SER115 ALA116 ASP117 ALA118 ALA119 GLY120 VAL121 HIS122 ALA123 VAL124 ILE125 VAL126 PRO127 LYS128 ASP129 ARG130 SER131 ALA132 GLN133 LEU134 ASN135 ALA136 THR137 ALA138 LYS139 LYS140 VAL141 ALA142 CYS143 GLY144 ALA145 ALA146 GLU147 SER148 VAL149 PRO150 LEU151 ILE152 ARG153 VAL154 THR155 ASN156 LEU157 ALA158 ARG159 THR160 MSE161 ARG162 MSE163 LEU164 GLN165 GLU166 GLU167 ASN168 ILE169 TRP170 ILE171 VAL172 GLY173 THR174 ALA175 GLY176 GLU177 ALA178 ASP179 HIS180 THR181 LEU182 TYR183 GLN184 SER185 LYS186 MSE187 THR188 GLY189 ARG190 LEU191 ALA192 LEU193 VAL194 MSE195 GLY196 ALA197 GLU198 GLY199 GLU200 GLY201 MSE202 ARG203 ARG204 LEU205 THR206 ARG207 GLU208 HIS209 CYS210 ASP211 GLU212 LEU213 ILE214 SER215 ILE216 PRO217 MSE218 ALA219 GLY220 SER221 VAL222 SER223 SER224 LEU225 ASN226 VAL227 SER228 VAL229 ALA230 THR231 GLY232 ILE233 CYS234 LEU235 PHE236 GLU237 ALA238 VAL239 ARG240 GLN241 ARG242 SER243
Unit 6 SER-10 SER-9 GLY-8 LEU-7 VAL-6 PRO-5 ARG-4 GLY-3 SER-2 HIS-1 MSE1 SER2 GLU3 MSE4 ILE5 TYR6 GLY7 ILE8 HIS9 ALA10 VAL11 GLN12 ALA13 LEU14 LEU15 GLU16 ARG17 ALA18 PRO19 GLU20 ARG21 PHE22 GLN23 GLU24 VAL25 PHE26 ILE27 LEU28 LYS29 GLY30 ARG31 GLU32 ASP33 LYS34 ARG35 LEU36 LEU37 PRO38 LEU39 ILE40 HIS41 ALA42 LEU43 GLU44 SER45 GLN46 GLY47 VAL48 VAL49 ILE50 GLN51 LEU52 ALA53 ASN54 ARG55 GLN56 TYR57 LEU58 ASP59 GLU60 LYS61 SER62 ASP63 GLY64 ALA65 VAL66 HIS67 GLN68 GLY69 ILE70 ILE71 ALA72 ARG73 VAL74 LYS75 PRO76 GLY77 ARG78 GLN79 TYR80 GLN81 GLU82 ASN83 ASP84 LEU85 PRO86 ASP87 LEU88 ILE89 ALA90 SER91 LEU92 ASP93 GLN94 PRO95 PHE96 LEU97 LEU98 ILE99 LEU100 ASP101 GLY102 VAL103 THR104 ASP105 PRO106 HIS107 ASN108 LEU109 GLY110 ALA111 CYS112 LEU113 ARG114 SER115 ALA116 ASP117 ALA118 ALA119 GLY120 VAL121 HIS122 ALA123 VAL124 ILE125 VAL126 PRO127 LYS128 ASP129 ARG130 SER131 ALA132 GLN133 LEU134 ASN135 ALA136 THR137 ALA138 LYS139 LYS140 VAL141 ALA142 CYS143 GLY144 ALA145 ALA146 GLU147 SER148 VAL149 PRO150 LEU151 ILE152 ARG153 VAL154 THR155 ASN156 LEU157 ALA158 ARG159 THR160 MSE161 ARG162 MSE163 LEU164 GLN165 GLU166 GLU167 ASN168 ILE169 TRP170 ILE171 VAL172 GLY173 THR174 ALA175 GLY176 GLU177 ALA178 ASP179 HIS180 THR181 LEU182 TYR183 GLN184 SER185 LYS186 MSE187 THR188 GLY189 ARG190 LEU191 ALA192 LEU193 VAL194 MSE195 GLY196 ALA197 GLU198 GLY199 GLU200 GLY201 MSE202 ARG203 ARG204 LEU205 THR206 ARG207 GLU208 HIS209 CYS210 ASP211 GLU212 LEU213 ILE214 SER215 ILE216 PRO217 MSE218 ALA219 GLY220 SER221 VAL222 SER223 SER224 LEU225 ASN226 VAL227 SER228 VAL229 ALA230 THR231 GLY232 ILE233 CYS234 LEU235 PHE236 GLU237 ALA238 VAL239 ARG240 GLN241 ARG242 SER243
Unit 7 ARG78 GLN79 TYR80 GLN81 GLU82 ASN83 ASP84 LEU85 PRO86 ASP87 LEU88 ILE89 ALA90 SER91 LEU92 ASP93 GLN94 PRO95 PHE96 LEU97 LEU98 ILE99 LEU100 ASP101 GLY102 VAL103 THR104 ASP105 PRO106 HIS107 ASN108 LEU109 GLY110 ALA111 CYS112 LEU113 ARG114 SER115 ALA116 ASP117 ALA118 ALA119 GLY120 VAL121 HIS122 ALA123 VAL124 ILE125 VAL126 PRO127 LYS128 ASP129 ARG130 SER131 ALA132 GLN133 LEU134 ASN135 ALA136 THR137 ALA138 LYS139 LYS140 VAL141 ALA142 CYS143 GLY144 ALA145 ALA146 GLU147 SER148 VAL149 PRO150 LEU151 ILE152 ARG153 VAL154 THR155 ASN156 LEU157 ALA158 ARG159 THR160 MSE161 ARG162 MSE163 LEU164 GLN165 GLU166 GLU167 ASN168 ILE169 TRP170 ILE171 VAL172 GLY173 THR174 ALA175 GLY176 GLU177 ALA178 ASP179 HIS180 THR181 LEU182 TYR183 GLN184 SER185 LYS186 MSE187 THR188 GLY189 ARG190 LEU191 ALA192 LEU193 VAL194 MSE195 GLY196 ALA197 GLU198 GLY199 GLU200 GLY201 MSE202 ARG203 ARG204 LEU205 THR206 ARG207 GLU208 HIS209 CYS210 ASP211 GLU212 LEU213 ILE214 SER215 ILE216 PRO217 MSE218 ALA219 GLY220 SER221 VAL222 SER223 SER224 LEU225 ASN226 VAL227 SER228 VAL229 ALA230 THR231 GLY232 ILE233 CYS234 LEU235 PHE236 GLU237 ALA238 VAL239 ARG240 GLN241 ARG242 SER243
Unit 8 LEU-7 VAL-6 PRO-5 ARG-4 GLY-3 SER-2 HIS-1 MSE1 SER2 GLU3 MSE4 ILE5 TYR6 GLY7 ILE8 HIS9 ALA10 VAL11 GLN12 ALA13 LEU14 LEU15 GLU16 ARG17 ALA18 PRO19 GLU20 ARG21 PHE22 GLN23 GLU24 VAL25 PHE26 ILE27 LEU28 LYS29 GLY30 ARG31 GLU32 ASP33 LYS34 ARG35 LEU36 LEU37 PRO38 LEU39 ILE40 HIS41 ALA42 LEU43 GLU44 SER45 GLN46 GLY47 VAL48 VAL49 ILE50 GLN51 LEU52 ALA53 ASN54 ARG55 GLN56 TYR57 LEU58 ASP59 GLU60 LYS61 SER62 ASP63 GLY64 ALA65 VAL66 HIS67 GLN68 GLY69 ILE70 ILE71 ALA72 ARG73 VAL74 LYS75 PRO76 GLY77 ARG78 GLN79 TYR80 GLN81 GLU82 ASN83 ASP84 LEU85 PRO86 ASP87 LEU88 ILE89 ALA90 SER91 LEU92 ASP93 GLN94 PRO95 PHE96 LEU97 LEU98 ILE99 LEU100 ASP101 GLY102 VAL103 THR104 ASP105 PRO106 HIS107 ASN108 LEU109 GLY110 ALA111 CYS112 LEU113 ARG114 SER115 ALA116 ASP117 ALA118 ALA119 GLY120 VAL121 HIS122 ALA123 VAL124 ILE125 VAL126 PRO127 LYS128 ASP129 ARG130 SER131 ALA132 GLN133 LEU134 ASN135 ALA136 THR137 ALA138 LYS139 LYS140 VAL141 ALA142 CYS143 GLY144 ALA145 ALA146 GLU147 SER148 VAL149 PRO150 LEU151 ILE152 ARG153 VAL154 THR155 ASN156 LEU157 ALA158 ARG159 THR160 MSE161 ARG162 MSE163 LEU164 GLN165 GLU166 GLU167 ASN168 ILE169 TRP170 ILE171 VAL172 GLY173 THR174 ALA175 GLY176 GLU177 ALA178 ASP179 HIS180 THR181 LEU182 TYR183 GLN184 SER185 LYS186 MSE187 THR188 GLY189 ARG190 LEU191 ALA192 LEU193 VAL194 MSE195 GLY196 ALA197 GLU198 GLY199 GLU200 GLY201 MSE202 ARG203 ARG204 LEU205 THR206 ARG207 GLU208 HIS209 CYS210 ASP211 GLU212 LEU213 ILE214 SER215 ILE216 PRO217 MSE218 ALA219 GLY220 SER221 VAL222 SER223 SER224 LEU225 ASN226 VAL227 SER228 VAL229 ALA230 THR231 GLY232 ILE233 CYS234 LEU235 PHE236 GLU237 ALA238 VAL239 ARG240 GLN241 ARG242 SER243

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany