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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL BASIS FOR THERMOPHILIC PROTEIN STABILITY: STRUCTU THERMOPHILIC AND MESOPHILIC MALATE DEHYDROGENASES
Keywords DEHYDROGENASE, OXIDOREDUCTASE, TRICARBOXYLIC ACID CYCLE, NAD
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1GUZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MALATE DEHYDROGENASE  A 306 2294 0
2  Protein   MALATE DEHYDROGENASE  B 297 2221 0
3  Protein   MALATE DEHYDROGENASE  C 306 2294 0
4  Protein   MALATE DEHYDROGENASE  D 296 2213 0
5  Ligand   MALATE DEHYDROGENASE  A 1 0 44
6  Ligand   MALATE DEHYDROGENASE  B 1 0 44
7  Ligand   MALATE DEHYDROGENASE  C 1 0 44
8  Ligand   MALATE DEHYDROGENASE  D 1 0 44
9 Water     869 0 869
total       2078 9022 1045

Proteins
Unit 1 MET1 LYS2 ILE3 THR4 VAL5 ILE6 GLY7 ALA8 GLY9 ASN10 VAL11 GLY12 ALA13 THR14 THR15 ALA16 PHE17 ARG18 LEU19 ALA20 GLU21 LYS22 GLN23 LEU24 ALA25 ARG26 GLU27 LEU28 VAL29 LEU30 LEU31 ASP32 VAL33 VAL34 GLU35 GLY36 ILE37 PRO38 GLN39 GLY40 LYS41 ALA42 LEU43 ASP44 MET45 TYR46 GLU47 SER48 GLY49 PRO50 VAL51 GLY52 LEU53 PHE54 ASP55 THR56 LYS57 VAL58 THR59 GLY60 SER61 ASN62 ASP63 TYR64 ALA65 ASP66 THR67 ALA68 ASN69 SER70 ASP71 ILE72 VAL73 ILE74 ILE75 THR76 ALA77 GLY78 LEU79 PRO80 ARG81 LYS82 PRO83 GLY84 MET85 THR86 ARG87 GLU88 ASP89 LEU90 LEU91 MET92 LYS93 ASN94 ALA95 GLY96 ILE97 VAL98 LYS99 GLU100 VAL101 THR102 ASP103 ASN104 ILE105 MET106 LYS107 HIS108 SER109 LYS110 ASN111 PRO112 ILE113 ILE114 ILE115 VAL116 VAL117 SER118 ASN119 PRO120 LEU121 ASP122 ILE123 MET124 THR125 HIS126 VAL127 ALA128 TRP129 VAL130 ARG131 SER132 GLY133 LEU134 PRO135 LYS136 GLU137 ARG138 VAL139 ILE140 GLY141 MET142 ALA143 GLY144 VAL145 LEU146 ASP147 ALA148 ALA149 ARG150 PHE151 ARG152 SER153 PHE154 ILE155 ALA156 MET157 GLU158 LEU159 GLY160 VAL161 SER162 MET163 GLN164 ASP165 ILE166 ASN167 ALA168 CYS169 VAL170 LEU171 GLY172 GLY173 HIS174 GLY175 ASP176 ALA177 MET178 VAL179 PRO180 VAL181 VAL182 LYS183 TYR184 THR185 THR186 VAL187 ALA188 GLY189 ILE190 PRO191 ILE192 SER193 ASP194 LEU195 LEU196 PRO197 ALA198 GLU199 THR200 ILE201 ASP202 LYS203 LEU204 VAL205 GLU206 ARG207 THR208 ARG209 ASN210 GLY211 GLY212 ALA213 GLU214 ILE215 VAL216 GLU217 HIS218 LEU219 LYS220 GLN221 GLY222 SER223 ALA224 PHE225 TYR226 ALA227 PRO228 ALA229 SER230 SER231 VAL232 VAL233 GLU234 MET235 VAL236 GLU237 SER238 ILE239 VAL240 LEU241 ASP242 ARG243 LYS244 ARG245 VAL246 LEU247 PRO248 CYS249 ALA250 VAL251 GLY252 LEU253 GLU254 GLY255 GLN256 TYR257 GLY258 ILE259 ASP260 LYS261 THR262 PHE263 VAL264 GLY265 VAL266 PRO267 VAL268 LYS269 LEU270 GLY271 ARG272 ASN273 GLY274 VAL275 GLU276 GLN277 ILE278 TYR279 GLU280 ILE281 ASN282 LEU283 ASP284 GLN285 ALA286 ASP287 LEU288 ASP289 LEU290 LEU291 GLN292 LYS293 SER294 ALA295 LYS296 ILE297 VAL298 ASP299 GLU300 ASN301 CYS302 LYS303 MET304 LEU305 GLU306
Unit 2 MET1 LYS2 ILE3 THR4 VAL5 ILE6 GLY7 ALA8 GLY9 ASN10 VAL11 GLY12 ALA13 THR14 THR15 ALA16 PHE17 ARG18 LEU19 ALA20 GLU21 LYS22 GLN23 LEU24 ALA25 ARG26 GLU27 LEU28 VAL29 LEU30 LEU31 ASP32 VAL33 VAL34 GLU35 GLY36 ILE37 PRO38 GLN39 GLY40 LYS41 ALA42 LEU43 ASP44 MET45 TYR46 GLU47 SER48 GLY49 PRO50 VAL51 GLY52 LEU53 PHE54 ASP55 THR56 LYS57 VAL58 THR59 GLY60 SER61 ASN62 ASP63 TYR64 ALA65 ASP66 THR67 ALA68 ASN69 SER70 ASP71 ILE72 VAL73 ILE74 ILE75 THR76 ALA77 GLY78 LEU79 ASP89 LEU90 LEU91 MET92 LYS93 ASN94 ALA95 GLY96 ILE97 VAL98 LYS99 GLU100 VAL101 THR102 ASP103 ASN104 ILE105 MET106 LYS107 HIS108 SER109 LYS110 ASN111 PRO112 ILE113 ILE114 ILE115 VAL116 VAL117 SER118 ASN119 PRO120 LEU121 ASP122 ILE123 MET124 THR125 HIS126 VAL127 ALA128 TRP129 VAL130 ARG131 SER132 GLY133 LEU134 PRO135 LYS136 GLU137 ARG138 VAL139 ILE140 GLY141 MET142 ALA143 GLY144 VAL145 LEU146 ASP147 ALA148 ALA149 ARG150 PHE151 ARG152 SER153 PHE154 ILE155 ALA156 MET157 GLU158 LEU159 GLY160 VAL161 SER162 MET163 GLN164 ASP165 ILE166 ASN167 ALA168 CYS169 VAL170 LEU171 GLY172 GLY173 HIS174 GLY175 ASP176 ALA177 MET178 VAL179 PRO180 VAL181 VAL182 LYS183 TYR184 THR185 THR186 VAL187 ALA188 GLY189 ILE190 PRO191 ILE192 SER193 ASP194 LEU195 LEU196 PRO197 ALA198 GLU199 THR200 ILE201 ASP202 LYS203 LEU204 VAL205 GLU206 ARG207 THR208 ARG209 ASN210 GLY211 GLY212 ALA213 GLU214 ILE215 VAL216 GLU217 HIS218 LEU219 LYS220 GLN221 GLY222 SER223 ALA224 PHE225 TYR226 ALA227 PRO228 ALA229 SER230 SER231 VAL232 VAL233 GLU234 MET235 VAL236 GLU237 SER238 ILE239 VAL240 LEU241 ASP242 ARG243 LYS244 ARG245 VAL246 LEU247 PRO248 CYS249 ALA250 VAL251 GLY252 LEU253 GLU254 GLY255 GLN256 TYR257 GLY258 ILE259 ASP260 LYS261 THR262 PHE263 VAL264 GLY265 VAL266 PRO267 VAL268 LYS269 LEU270 GLY271 ARG272 ASN273 GLY274 VAL275 GLU276 GLN277 ILE278 TYR279 GLU280 ILE281 ASN282 LEU283 ASP284 GLN285 ALA286 ASP287 LEU288 ASP289 LEU290 LEU291 GLN292 LYS293 SER294 ALA295 LYS296 ILE297 VAL298 ASP299 GLU300 ASN301 CYS302 LYS303 MET304 LEU305 GLU306
Unit 3 MET1 LYS2 ILE3 THR4 VAL5 ILE6 GLY7 ALA8 GLY9 ASN10 VAL11 GLY12 ALA13 THR14 THR15 ALA16 PHE17 ARG18 LEU19 ALA20 GLU21 LYS22 GLN23 LEU24 ALA25 ARG26 GLU27 LEU28 VAL29 LEU30 LEU31 ASP32 VAL33 VAL34 GLU35 GLY36 ILE37 PRO38 GLN39 GLY40 LYS41 ALA42 LEU43 ASP44 MET45 TYR46 GLU47 SER48 GLY49 PRO50 VAL51 GLY52 LEU53 PHE54 ASP55 THR56 LYS57 VAL58 THR59 GLY60 SER61 ASN62 ASP63 TYR64 ALA65 ASP66 THR67 ALA68 ASN69 SER70 ASP71 ILE72 VAL73 ILE74 ILE75 THR76 ALA77 GLY78 LEU79 PRO80 ARG81 LYS82 PRO83 GLY84 MET85 THR86 ARG87 GLU88 ASP89 LEU90 LEU91 MET92 LYS93 ASN94 ALA95 GLY96 ILE97 VAL98 LYS99 GLU100 VAL101 THR102 ASP103 ASN104 ILE105 MET106 LYS107 HIS108 SER109 LYS110 ASN111 PRO112 ILE113 ILE114 ILE115 VAL116 VAL117 SER118 ASN119 PRO120 LEU121 ASP122 ILE123 MET124 THR125 HIS126 VAL127 ALA128 TRP129 VAL130 ARG131 SER132 GLY133 LEU134 PRO135 LYS136 GLU137 ARG138 VAL139 ILE140 GLY141 MET142 ALA143 GLY144 VAL145 LEU146 ASP147 ALA148 ALA149 ARG150 PHE151 ARG152 SER153 PHE154 ILE155 ALA156 MET157 GLU158 LEU159 GLY160 VAL161 SER162 MET163 GLN164 ASP165 ILE166 ASN167 ALA168 CYS169 VAL170 LEU171 GLY172 GLY173 HIS174 GLY175 ASP176 ALA177 MET178 VAL179 PRO180 VAL181 VAL182 LYS183 TYR184 THR185 THR186 VAL187 ALA188 GLY189 ILE190 PRO191 ILE192 SER193 ASP194 LEU195 LEU196 PRO197 ALA198 GLU199 THR200 ILE201 ASP202 LYS203 LEU204 VAL205 GLU206 ARG207 THR208 ARG209 ASN210 GLY211 GLY212 ALA213 GLU214 ILE215 VAL216 GLU217 HIS218 LEU219 LYS220 GLN221 GLY222 SER223 ALA224 PHE225 TYR226 ALA227 PRO228 ALA229 SER230 SER231 VAL232 VAL233 GLU234 MET235 VAL236 GLU237 SER238 ILE239 VAL240 LEU241 ASP242 ARG243 LYS244 ARG245 VAL246 LEU247 PRO248 CYS249 ALA250 VAL251 GLY252 LEU253 GLU254 GLY255 GLN256 TYR257 GLY258 ILE259 ASP260 LYS261 THR262 PHE263 VAL264 GLY265 VAL266 PRO267 VAL268 LYS269 LEU270 GLY271 ARG272 ASN273 GLY274 VAL275 GLU276 GLN277 ILE278 TYR279 GLU280 ILE281 ASN282 LEU283 ASP284 GLN285 ALA286 ASP287 LEU288 ASP289 LEU290 LEU291 GLN292 LYS293 SER294 ALA295 LYS296 ILE297 VAL298 ASP299 GLU300 ASN301 CYS302 LYS303 MET304 LEU305 GLU306
Unit 4 MET1 LYS2 ILE3 THR4 VAL5 ILE6 GLY7 ALA8 GLY9 ASN10 VAL11 GLY12 ALA13 THR14 THR15 ALA16 PHE17 ARG18 LEU19 ALA20 GLU21 LYS22 GLN23 LEU24 ALA25 ARG26 GLU27 LEU28 VAL29 LEU30 LEU31 ASP32 VAL33 VAL34 GLU35 GLY36 ILE37 PRO38 GLN39 GLY40 LYS41 ALA42 LEU43 ASP44 MET45 TYR46 GLU47 SER48 GLY49 PRO50 VAL51 GLY52 LEU53 PHE54 ASP55 THR56 LYS57 VAL58 THR59 GLY60 SER61 ASN62 ASP63 TYR64 ALA65 ASP66 THR67 ALA68 ASN69 SER70 ASP71 ILE72 VAL73 ILE74 ILE75 THR76 ALA77 GLY78 LEU79 LEU90 LEU91 MET92 LYS93 ASN94 ALA95 GLY96 ILE97 VAL98 LYS99 GLU100 VAL101 THR102 ASP103 ASN104 ILE105 MET106 LYS107 HIS108 SER109 LYS110 ASN111 PRO112 ILE113 ILE114 ILE115 VAL116 VAL117 SER118 ASN119 PRO120 LEU121 ASP122 ILE123 MET124 THR125 HIS126 VAL127 ALA128 TRP129 VAL130 ARG131 SER132 GLY133 LEU134 PRO135 LYS136 GLU137 ARG138 VAL139 ILE140 GLY141 MET142 ALA143 GLY144 VAL145 LEU146 ASP147 ALA148 ALA149 ARG150 PHE151 ARG152 SER153 PHE154 ILE155 ALA156 MET157 GLU158 LEU159 GLY160 VAL161 SER162 MET163 GLN164 ASP165 ILE166 ASN167 ALA168 CYS169 VAL170 LEU171 GLY172 GLY173 HIS174 GLY175 ASP176 ALA177 MET178 VAL179 PRO180 VAL181 VAL182 LYS183 TYR184 THR185 THR186 VAL187 ALA188 GLY189 ILE190 PRO191 ILE192 SER193 ASP194 LEU195 LEU196 PRO197 ALA198 GLU199 THR200 ILE201 ASP202 LYS203 LEU204 VAL205 GLU206 ARG207 THR208 ARG209 ASN210 GLY211 GLY212 ALA213 GLU214 ILE215 VAL216 GLU217 HIS218 LEU219 LYS220 GLN221 GLY222 SER223 ALA224 PHE225 TYR226 ALA227 PRO228 ALA229 SER230 SER231 VAL232 VAL233 GLU234 MET235 VAL236 GLU237 SER238 ILE239 VAL240 LEU241 ASP242 ARG243 LYS244 ARG245 VAL246 LEU247 PRO248 CYS249 ALA250 VAL251 GLY252 LEU253 GLU254 GLY255 GLN256 TYR257 GLY258 ILE259 ASP260 LYS261 THR262 PHE263 VAL264 GLY265 VAL266 PRO267 VAL268 LYS269 LEU270 GLY271 ARG272 ASN273 GLY274 VAL275 GLU276 GLN277 ILE278 TYR279 GLU280 ILE281 ASN282 LEU283 ASP284 GLN285 ALA286 ASP287 LEU288 ASP289 LEU290 LEU291 GLN292 LYS293 SER294 ALA295 LYS296 ILE297 VAL298 ASP299 GLU300 ASN301 CYS302 LYS303 MET304 LEU305 GLU306

Ligands
Unit 5 NAD1306
Unit 6 NAD1306
Unit 7 NAD1306
Unit 8 NAD1306

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany