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Sequence, Chains, Asymmetric and Biological Units

Title QUERCETIN 2,3-DIOXYGENASE IN COMPLEX WITH THE INHIBITOR KOJI
Keywords OXIDOREDUCTASE, DIOXYGENASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1GQH     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   QUERCETIN 2,3-DIOXYGENASE  A 341 2625 0
2  Protein   QUERCETIN 2,3-DIOXYGENASE  B 334 2581 0
3  Protein   QUERCETIN 2,3-DIOXYGENASE  C 333 2569 0
4  Protein   QUERCETIN 2,3-DIOXYGENASE  D 331 2561 0
5  Ligand    E 3 0 39
6  Ligand    F 4 0 50
7  Ligand    G 4 0 50
8  Ligand    H 2 0 28
9  Ligand   QUERCETIN 2,3-DIOXYGENASE  A 6 0 67
10  Ligand   QUERCETIN 2,3-DIOXYGENASE  B 5 0 53
11  Ligand   QUERCETIN 2,3-DIOXYGENASE  C 5 0 53
12  Ligand   QUERCETIN 2,3-DIOXYGENASE  D 4 0 39
13 Water     1019 0 1019
total       2391 10336 1398

Proteins
Unit 1 THR2 SER3 SER4 LEU5 ILE6 VAL7 GLU8 ASP9 ALA10 PRO11 ASP12 HIS13 VAL14 ARG15 PRO16 TYR17 VAL18 ILE19 ARG20 HIS21 TYR22 SER23 HIS24 ALA25 ARG26 ALA27 VAL28 THR29 VAL30 ASP31 THR32 GLN33 LEU34 TYR35 ARG36 PHE37 TYR38 VAL39 THR40 GLY41 PRO42 SER43 SER44 GLY45 TYR46 ALA47 PHE48 THR49 LEU50 MET51 GLY52 THR53 ASN54 ALA55 PRO56 HIS57 SER58 ASP59 ALA60 LEU61 GLY62 VAL63 LEU64 PRO65 HIS66 ILE67 HIS68 GLN69 LYS70 HIS71 TYR72 GLU73 ASN74 PHE75 TYR76 CYS77 ASN78 LYS79 GLY80 SER81 PHE82 GLN83 LEU84 TRP85 ALA86 GLN87 SER88 GLY89 ASN90 GLU91 THR92 GLN93 GLN94 THR95 ARG96 VAL97 LEU98 SER99 SER100 GLY101 ASP102 TYR103 GLY104 SER105 VAL106 PRO107 ARG108 ASN109 VAL110 THR111 HIS112 THR113 PHE114 GLN115 ILE116 GLN117 ASP118 PRO119 ASP120 THR121 GLU122 MET123 THR124 GLY125 VAL126 ILE127 VAL128 PRO129 GLY130 GLY131 PHE132 GLU133 ASP134 LEU135 PHE136 TYR137 TYR138 LEU139 GLY140 THR141 ASN142 ALA143 THR144 ASP145 THR146 THR147 HIS148 THR149 PRO150 TYR151 ILE152 PRO153 SER154 GLY163 PRO164 ASP165 SER166 SER167 THR168 ILE169 SER170 THR171 LEU172 GLN173 SER174 PHE175 ASP176 VAL177 TYR178 ALA179 GLU180 LEU181 SER182 PHE183 THR184 PRO185 ARG186 THR187 ASP188 THR189 VAL190 ASN191 GLY192 THR193 ALA194 PRO195 ALA196 ASN197 THR198 VAL199 TRP200 HIS201 THR202 GLY203 ALA204 ASN205 ALA206 LEU207 ALA208 SER209 THR210 ALA211 GLY212 ASP213 PRO214 TYR215 PHE216 ILE217 ALA218 ASN219 GLY220 TRP221 GLY222 PRO223 LYS224 TYR225 LEU226 ASN227 SER228 GLN229 TYR230 GLY231 TYR232 GLN233 ILE234 VAL235 ALA236 PRO237 PHE238 VAL239 THR240 ALA241 THR242 GLN243 ALA244 GLN245 ASP246 THR247 ASN248 TYR249 THR250 LEU251 SER252 THR253 ILE254 SER255 MET256 SER257 THR258 THR259 PRO260 SER261 THR262 VAL263 THR264 VAL265 PRO266 THR267 TRP268 SER269 PHE270 PRO271 GLY272 ALA273 CYS274 ALA275 PHE276 GLN277 VAL278 GLN279 GLU280 GLY281 ARG282 VAL283 VAL284 VAL285 GLN286 ILE287 GLY288 ASP289 TYR290 ALA291 ALA292 THR293 GLU294 LEU295 GLY296 SER297 GLY298 ASP299 VAL300 ALA301 PHE302 ILE303 PRO304 GLY305 GLY306 VAL307 GLU308 PHE309 LYS310 TYR311 TYR312 SER313 GLU314 ALA315 TYR316 PHE317 SER318 LYS319 VAL320 LEU321 PHE322 VAL323 SER324 SER325 GLY326 SER327 ASP328 GLY329 LEU330 ASP331 GLN332 ASN333 LEU334 VAL335 ASN336 GLY337 GLY338 GLU339 GLU340 TRP341 SER342 SER343 VAL344 SER345 PHE346 PRO347 ALA348 ASP349 TRP350
Unit 2 SER3 SER4 LEU5 ILE6 VAL7 GLU8 ASP9 ALA10 PRO11 ASP12 HIS13 VAL14 ARG15 PRO16 TYR17 VAL18 ILE19 ARG20 HIS21 TYR22 SER23 HIS24 ALA25 ARG26 ALA27 VAL28 THR29 VAL30 ASP31 THR32 GLN33 LEU34 TYR35 ARG36 PHE37 TYR38 VAL39 THR40 GLY41 PRO42 SER43 SER44 GLY45 TYR46 ALA47 PHE48 THR49 LEU50 MET51 GLY52 THR53 ASN54 ALA55 PRO56 HIS57 SER58 ASP59 ALA60 LEU61 GLY62 VAL63 LEU64 PRO65 HIS66 ILE67 HIS68 GLN69 LYS70 HIS71 TYR72 GLU73 ASN74 PHE75 TYR76 CYS77 ASN78 LYS79 GLY80 SER81 PHE82 GLN83 LEU84 TRP85 ALA86 GLN87 SER88 GLY89 ASN90 GLU91 THR92 GLN93 GLN94 THR95 ARG96 VAL97 LEU98 SER99 SER100 GLY101 ASP102 TYR103 GLY104 SER105 VAL106 PRO107 ARG108 ASN109 VAL110 THR111 HIS112 THR113 PHE114 GLN115 ILE116 GLN117 ASP118 PRO119 ASP120 THR121 GLU122 MET123 THR124 GLY125 VAL126 ILE127 VAL128 PRO129 GLY130 GLY131 PHE132 GLU133 ASP134 LEU135 PHE136 TYR137 TYR138 LEU139 GLY140 THR141 ASN142 ALA143 THR144 ASP145 THR146 THR147 HIS148 THR149 PRO150 TYR151 ILE152 PRO153 THR168 ILE169 SER170 THR171 LEU172 GLN173 SER174 PHE175 ASP176 VAL177 TYR178 ALA179 GLU180 LEU181 SER182 PHE183 THR184 PRO185 ARG186 THR187 ASP188 THR189 VAL190 ASN191 GLY192 THR193 ALA194 PRO195 ALA196 ASN197 THR198 VAL199 TRP200 HIS201 THR202 GLY203 ALA204 ASN205 ALA206 LEU207 ALA208 SER209 THR210 ALA211 GLY212 ASP213 PRO214 TYR215 PHE216 ILE217 ALA218 ASN219 GLY220 TRP221 GLY222 PRO223 LYS224 TYR225 LEU226 ASN227 SER228 GLN229 TYR230 GLY231 TYR232 GLN233 ILE234 VAL235 ALA236 PRO237 PHE238 VAL239 THR240 ALA241 THR242 GLN243 ALA244 GLN245 ASP246 THR247 ASN248 TYR249 THR250 LEU251 SER252 THR253 ILE254 SER255 MET256 SER257 THR258 THR259 PRO260 SER261 THR262 VAL263 THR264 VAL265 PRO266 THR267 TRP268 SER269 PHE270 PRO271 GLY272 ALA273 CYS274 ALA275 PHE276 GLN277 VAL278 GLN279 GLU280 GLY281 ARG282 VAL283 VAL284 VAL285 GLN286 ILE287 GLY288 ASP289 TYR290 ALA291 ALA292 THR293 GLU294 LEU295 GLY296 SER297 GLY298 ASP299 VAL300 ALA301 PHE302 ILE303 PRO304 GLY305 GLY306 VAL307 GLU308 PHE309 LYS310 TYR311 TYR312 SER313 GLU314 ALA315 TYR316 PHE317 SER318 LYS319 VAL320 LEU321 PHE322 VAL323 SER324 SER325 GLY326 SER327 ASP328 GLY329 LEU330 ASP331 GLN332 ASN333 LEU334 VAL335 ASN336 GLY337 GLY338 GLU339 GLU340 TRP341 SER342 SER343 VAL344 SER345 PHE346 PRO347 ALA348 ASP349 TRP350
Unit 3 SER3 SER4 LEU5 ILE6 VAL7 GLU8 ASP9 ALA10 PRO11 ASP12 HIS13 VAL14 ARG15 PRO16 TYR17 VAL18 ILE19 ARG20 HIS21 TYR22 SER23 HIS24 ALA25 ARG26 ALA27 VAL28 THR29 VAL30 ASP31 THR32 GLN33 LEU34 TYR35 ARG36 PHE37 TYR38 VAL39 THR40 GLY41 PRO42 SER43 SER44 GLY45 TYR46 ALA47 PHE48 THR49 LEU50 MET51 GLY52 THR53 ASN54 ALA55 PRO56 HIS57 SER58 ASP59 ALA60 LEU61 GLY62 VAL63 LEU64 PRO65 HIS66 ILE67 HIS68 GLN69 LYS70 HIS71 TYR72 GLU73 ASN74 PHE75 TYR76 CYS77 ASN78 LYS79 GLY80 SER81 PHE82 GLN83 LEU84 TRP85 ALA86 GLN87 SER88 GLY89 ASN90 GLU91 THR92 GLN93 GLN94 THR95 ARG96 VAL97 LEU98 SER99 SER100 GLY101 ASP102 TYR103 GLY104 SER105 VAL106 PRO107 ARG108 ASN109 VAL110 THR111 HIS112 THR113 PHE114 GLN115 ILE116 GLN117 ASP118 PRO119 ASP120 THR121 GLU122 MET123 THR124 GLY125 VAL126 ILE127 VAL128 PRO129 GLY130 GLY131 PHE132 GLU133 ASP134 LEU135 PHE136 TYR137 TYR138 LEU139 GLY140 THR141 ASN142 ALA143 THR144 ASP145 THR146 THR147 HIS148 THR149 PRO150 TYR151 ILE152 PRO153 SER154 SER170 THR171 LEU172 GLN173 SER174 PHE175 ASP176 VAL177 TYR178 ALA179 GLU180 LEU181 SER182 PHE183 THR184 PRO185 ARG186 THR187 ASP188 THR189 VAL190 ASN191 GLY192 THR193 ALA194 PRO195 ALA196 ASN197 THR198 VAL199 TRP200 HIS201 THR202 GLY203 ALA204 ASN205 ALA206 LEU207 ALA208 SER209 THR210 ALA211 GLY212 ASP213 PRO214 TYR215 PHE216 ILE217 ALA218 ASN219 GLY220 TRP221 GLY222 PRO223 LYS224 TYR225 LEU226 ASN227 SER228 GLN229 TYR230 GLY231 TYR232 GLN233 ILE234 VAL235 ALA236 PRO237 PHE238 VAL239 THR240 ALA241 THR242 GLN243 ALA244 GLN245 ASP246 THR247 ASN248 TYR249 THR250 LEU251 SER252 THR253 ILE254 SER255 MET256 SER257 THR258 THR259 PRO260 SER261 THR262 VAL263 THR264 VAL265 PRO266 THR267 TRP268 SER269 PHE270 PRO271 GLY272 ALA273 CYS274 ALA275 PHE276 GLN277 VAL278 GLN279 GLU280 GLY281 ARG282 VAL283 VAL284 VAL285 GLN286 ILE287 GLY288 ASP289 TYR290 ALA291 ALA292 THR293 GLU294 LEU295 GLY296 SER297 GLY298 ASP299 VAL300 ALA301 PHE302 ILE303 PRO304 GLY305 GLY306 VAL307 GLU308 PHE309 LYS310 TYR311 TYR312 SER313 GLU314 ALA315 TYR316 PHE317 SER318 LYS319 VAL320 LEU321 PHE322 VAL323 SER324 SER325 GLY326 SER327 ASP328 GLY329 LEU330 ASP331 GLN332 ASN333 LEU334 VAL335 ASN336 GLY337 GLY338 GLU339 GLU340 TRP341 SER342 SER343 VAL344 SER345 PHE346 PRO347 ALA348 ASP349 TRP350
Unit 4 SER4 LEU5 ILE6 VAL7 GLU8 ASP9 ALA10 PRO11 ASP12 HIS13 VAL14 ARG15 PRO16 TYR17 VAL18 ILE19 ARG20 HIS21 TYR22 SER23 HIS24 ALA25 ARG26 ALA27 VAL28 THR29 VAL30 ASP31 THR32 GLN33 LEU34 TYR35 ARG36 PHE37 TYR38 VAL39 THR40 GLY41 PRO42 SER43 SER44 GLY45 TYR46 ALA47 PHE48 THR49 LEU50 MET51 GLY52 THR53 ASN54 ALA55 PRO56 HIS57 SER58 ASP59 ALA60 LEU61 GLY62 VAL63 LEU64 PRO65 HIS66 ILE67 HIS68 GLN69 LYS70 HIS71 TYR72 GLU73 ASN74 PHE75 TYR76 CYS77 ASN78 LYS79 GLY80 SER81 PHE82 GLN83 LEU84 TRP85 ALA86 GLN87 SER88 GLY89 ASN90 GLU91 THR92 GLN93 GLN94 THR95 ARG96 VAL97 LEU98 SER99 SER100 GLY101 ASP102 TYR103 GLY104 SER105 VAL106 PRO107 ARG108 ASN109 VAL110 THR111 HIS112 THR113 PHE114 GLN115 ILE116 GLN117 ASP118 PRO119 ASP120 THR121 GLU122 MET123 THR124 GLY125 VAL126 ILE127 VAL128 PRO129 GLY130 GLY131 PHE132 GLU133 ASP134 LEU135 PHE136 TYR137 TYR138 LEU139 GLY140 THR141 ASN142 ALA143 THR144 ASP145 THR146 THR147 HIS148 THR149 PRO150 TYR151 ILE152 PRO153 SER170 THR171 LEU172 GLN173 SER174 PHE175 ASP176 VAL177 TYR178 ALA179 GLU180 LEU181 SER182 PHE183 THR184 PRO185 ARG186 THR187 ASP188 THR189 VAL190 ASN191 GLY192 THR193 ALA194 PRO195 ALA196 ASN197 THR198 VAL199 TRP200 HIS201 THR202 GLY203 ALA204 ASN205 ALA206 LEU207 ALA208 SER209 THR210 ALA211 GLY212 ASP213 PRO214 TYR215 PHE216 ILE217 ALA218 ASN219 GLY220 TRP221 GLY222 PRO223 LYS224 TYR225 LEU226 ASN227 SER228 GLN229 TYR230 GLY231 TYR232 GLN233 ILE234 VAL235 ALA236 PRO237 PHE238 VAL239 THR240 ALA241 THR242 GLN243 ALA244 GLN245 ASP246 THR247 ASN248 TYR249 THR250 LEU251 SER252 THR253 ILE254 SER255 MET256 SER257 THR258 THR259 PRO260 SER261 THR262 VAL263 THR264 VAL265 PRO266 THR267 TRP268 SER269 PHE270 PRO271 GLY272 ALA273 CYS274 ALA275 PHE276 GLN277 VAL278 GLN279 GLU280 GLY281 ARG282 VAL283 VAL284 VAL285 GLN286 ILE287 GLY288 ASP289 TYR290 ALA291 ALA292 THR293 GLU294 LEU295 GLY296 SER297 GLY298 ASP299 VAL300 ALA301 PHE302 ILE303 PRO304 GLY305 GLY306 VAL307 GLU308 PHE309 LYS310 TYR311 TYR312 SER313 GLU314 ALA315 TYR316 PHE317 SER318 LYS319 VAL320 LEU321 PHE322 VAL323 SER324 SER325 GLY326 SER327 ASP328 GLY329 LEU330 ASP331 GLN332 ASN333 LEU334 VAL335 ASN336 GLY337 GLY338 GLU339 GLU340 TRP341 SER342 SER343 VAL344 SER345 PHE346 PRO347 ALA348 ASP349 TRP350

Ligands
Unit 5 NAG1 NAG2 MAN3
Unit 6 NAG1 NAG2 MAN3 MAN4
Unit 7 NAG1 NAG2 MAN3 MAN4
Unit 8 NAG1 NAG2
Unit 9 KOJ1351 CU1352 NAG1353 NAG1356 NAG1357 NAG1358
Unit 10 KOJ1351 CU1352 NAG1353 NAG1356 NAG1357
Unit 11 KOJ1351 CU1352 NAG1354 NAG1357 NAG1358
Unit 12 KOJ1351 CU1352 NAG1353 NAG1356

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany