1GPD - Sequence, Chains, Asymmetric and Biological Units

• Title: STUDIES OF ASYMMETRY IN THE THREE-DIMENSIONAL STRUCTURE OF L GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
• Keywords: OXIDO-REDUCTASE(ALDEHYDE/DONR,NAD/ACCPT), OXIDO-REDUCTASE(AL DONR,NAD-ACCPT) COMPLEX, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1GPD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE	G	334	2507	3
2	Protein	D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE	R	334	2507	3
3	Ligand	D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE	R	4	0	4
4	Ligand	D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE	G	1	0	44
5	Ligand	D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE	R	1	0	44
total				674	5014	98

Proteins

Unit 1

ACE 0 SER 1 LYS 2 ILE 3 GLY 4 ILE 5 ASN 6 GLY 7 PHE 8 GLY 9 ARG 10 ILE 11 GLY 12 ARG 13 LEU 14 VAL 15 LEU 16 ARG 17 ALA 18 ALA 19 LEU 20 SER 21 CYS 22 GLY 23 ALA 25 GLN 26 VAL 27 VAL 28 ALA 29 VAL 30 ASN 31 ASP 32 PRO 33 PHE 34 ILE 35 ALA 36 LEU 37 GLU 38 TYR 39 MET 40 VAL 41 TYR 42 MET 43 PHE 44 LYS 45 TYR 46 ASP 47 SER 48 THR 49 HIS 50 GLY 51 VAL 52 PHE 53 LYS 54 GLY 55 GLU 56 VAL 57 LYS 58 MET 59 GLU 60 ASP 61 GLY 62 ALA 63 LEU 64 VAL 65 VAL 66 ASP 67 GLY 68 LYS 69 LYS 70 ILE 71 THR 72 VAL 73 PHE 74 ASN 75 GLU 76 MET 77 LYS 78 PRO 79 GLU 80 ASN 81 ILE 82 PRO 83 TRP 84 SER 85 LYS 86 ALA 87 GLY 88 ALA 89 GLU 90 TYR 91 ILE 92 VAL 93 GLU 94 SER 95 THR 96 GLY 97 VAL 98 PHE 99 THR 100 THR 101 ILE 102 GLU 103 LYS 104 ALA 105 SER 106 ALA 107 HIS 108 PHE 109 LYS 110 GLY 111 GLY 112 ALA 113 LYS 114 LYS 115 VAL 116 VAL 117 ILE 118 SER 119 ALA 120 PRO 121 SER 122 ALA 123 ASP 124 ALA 125 PRO 126 MET 127 PHE 128 VAL 129 CYS 130 GLY 131 VAL 132 ASN 133 LEU 134 GLU 135 LYS 136 TYR 137 SER 138 LYS 139 ASP 140 MET 141 THR 142 VAL 143 VAL 144 SER 145 ASN 146 ALA 147 SER 148 CYS 149 THR 150 THR 151 ASN 152 CYS 153 LEU 154 ALA 155 PRO 156 VAL 157 ALA 158 LYS 159 VAL 160 LEU 161 HIS 162 GLU 163 ASN 164 PHE 165 GLU 166 ILE 167 VAL 168 GLU 169 GLY 170 LEU 171 MET 172 THR 173 THR 174 VAL 175 HIS 176 ALA 177 VAL 178 THR 179 ALA 180 THR 181 GLN 182 LYS 183 THR 184 VAL 185 ASP 186 GLY 187 PRO 188 SER 189 ALA 190 LYS 191 ASP 192 TRP 193 ARG 194 GLY 195 GLY 196 ARG 197 GLY 198 ALA 199 ALA 200 GLN 201 ASN 202 ILE 203 ILE 204 PRO 205 SER 206 SER 207 THR 208 GLY 209 ALA 210 ALA 211 LYS 212 ALA 213 VAL 214 GLY 215 LYS 216 VAL 217 ILE 218 PRO 219 GLU 220 LEU 221 ASP 222 GLY 223 LYS 224 LEU 225 THR 226 GLY 227 MET 228 ALA 229 PHE 230 ARG 231 VAL 232 PRO 233 THR 234 PRO 235 ASP 236 VAL 237 SER 238 VAL 239 VAL 240 ASP 241 LEU 242 THR 243 VAL 244 ARG 245 LEU 246 GLY 247 LYS 248 GLU 249 CYS 250 SER 251 TYR 252 ASP 253 ASP 254 ILE 255 LYS 256 ALA 257 ALA 258 MET 259 LYS 260 THR 261 ALA 262 SER 263 GLU 264 GLY 265 PRO 266 LEU 267 GLN 268 GLY 269 PHE 270 LEU 271 GLY 272 TYR 273 THR 274 GLU 275 ASP 276 ASP 277 VAL 278 VAL 279 SER 280 SER 281 ASP 282 PHE 283 ILE 284 GLY 285 ASP 286 ASN 287 ARG 288 SER 289 SER 290 ILE 291 PHE 292 ASP 293 ALA 294 LYS 295 ALA 296 GLY 297 ILE 298 GLN 299 LEU 300 SER 301 LYS 302 THR 303 PHE 304 VAL 305 LYS 306 VAL 307 VAL 308 SER 309 TRP 310 TYR 311 ASP 312 ASN 313 GLU 314 PHE 315 GLY 316 TYR 317 SER 318 GLN 319 ARG 320 VAL 321 ILE 322 ASP 323 LEU 324 LEU 325 LYS 326 HIS 327 MET 328 GLN 329 LYS 330 VAL 331 ASP 332 SER 333 ALA 334

Unit 2

ACE 0 SER 1 LYS 2 ILE 3 GLY 4 ILE 5 ASN 6 GLY 7 PHE 8 GLY 9 ARG 10 ILE 11 GLY 12 ARG 13 LEU 14 VAL 15 LEU 16 ARG 17 ALA 18 ALA 19 LEU 20 SER 21 CYS 22 GLY 23 ALA 25 GLN 26 VAL 27 VAL 28 ALA 29 VAL 30 ASN 31 ASP 32 PRO 33 PHE 34 ILE 35 ALA 36 LEU 37 GLU 38 TYR 39 MET 40 VAL 41 TYR 42 MET 43 PHE 44 LYS 45 TYR 46 ASP 47 SER 48 THR 49 HIS 50 GLY 51 VAL 52 PHE 53 LYS 54 GLY 55 GLU 56 VAL 57 LYS 58 MET 59 GLU 60 ASP 61 GLY 62 ALA 63 LEU 64 VAL 65 VAL 66 ASP 67 GLY 68 LYS 69 LYS 70 ILE 71 THR 72 VAL 73 PHE 74 ASN 75 GLU 76 MET 77 LYS 78 PRO 79 GLU 80 ASN 81 ILE 82 PRO 83 TRP 84 SER 85 LYS 86 ALA 87 GLY 88 ALA 89 GLU 90 TYR 91 ILE 92 VAL 93 GLU 94 SER 95 THR 96 GLY 97 VAL 98 PHE 99 THR 100 THR 101 ILE 102 GLU 103 LYS 104 ALA 105 SER 106 ALA 107 HIS 108 PHE 109 LYS 110 GLY 111 GLY 112 ALA 113 LYS 114 LYS 115 VAL 116 VAL 117 ILE 118 SER 119 ALA 120 PRO 121 SER 122 ALA 123 ASP 124 ALA 125 PRO 126 MET 127 PHE 128 VAL 129 CYS 130 GLY 131 VAL 132 ASN 133 LEU 134 GLU 135 LYS 136 TYR 137 SER 138 LYS 139 ASP 140 MET 141 THR 142 VAL 143 VAL 144 SER 145 ASN 146 ALA 147 SER 148 CYS 149 THR 150 THR 151 ASN 152 CYS 153 LEU 154 ALA 155 PRO 156 VAL 157 ALA 158 LYS 159 VAL 160 LEU 161 HIS 162 GLU 163 ASN 164 PHE 165 GLU 166 ILE 167 VAL 168 GLU 169 GLY 170 LEU 171 MET 172 THR 173 THR 174 VAL 175 HIS 176 ALA 177 VAL 178 THR 179 ALA 180 THR 181 GLN 182 LYS 183 THR 184 VAL 185 ASP 186 GLY 187 PRO 188 SER 189 ALA 190 LYS 191 ASP 192 TRP 193 ARG 194 GLY 195 GLY 196 ARG 197 GLY 198 ALA 199 ALA 200 GLN 201 ASN 202 ILE 203 ILE 204 PRO 205 SER 206 SER 207 THR 208 GLY 209 ALA 210 ALA 211 LYS 212 ALA 213 VAL 214 GLY 215 LYS 216 VAL 217 ILE 218 PRO 219 GLU 220 LEU 221 ASP 222 GLY 223 LYS 224 LEU 225 THR 226 GLY 227 MET 228 ALA 229 PHE 230 ARG 231 VAL 232 PRO 233 THR 234 PRO 235 ASP 236 VAL 237 SER 238 VAL 239 VAL 240 ASP 241 LEU 242 THR 243 VAL 244 ARG 245 LEU 246 GLY 247 LYS 248 GLU 249 CYS 250 SER 251 TYR 252 ASP 253 ASP 254 ILE 255 LYS 256 ALA 257 ALA 258 MET 259 LYS 260 THR 261 ALA 262 SER 263 GLU 264 GLY 265 PRO 266 LEU 267 GLN 268 GLY 269 PHE 270 LEU 271 GLY 272 TYR 273 THR 274 GLU 275 ASP 276 ASP 277 VAL 278 VAL 279 SER 280 SER 281 ASP 282 PHE 283 ILE 284 GLY 285 ASP 286 ASN 287 ARG 288 SER 289 SER 290 ILE 291 PHE 292 ASP 293 ALA 294 LYS 295 ALA 296 GLY 297 ILE 298 GLN 299 LEU 300 SER 301 LYS 302 THR 303 PHE 304 VAL 305 LYS 306 VAL 307 VAL 308 SER 309 TRP 310 TYR 311 ASP 312 ASN 313 GLU 314 PHE 315 GLY 316 TYR 317 SER 318 GLN 319 ARG 320 VAL 321 ILE 322 ASP 323 LEU 324 LEU 325 LYS 326 HIS 327 MET 328 GLN 329 LYS 330 VAL 331 ASP 332 SER 333 ALA 334

Ligands

Unit 3	PO4 335 PO4 336 PO4 337 PO4 338
Unit 4	NAD 335
Unit 5	NAD 339