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Title | THE ATOMIC STRUCTURE OF THE DEGRADED PROCAPSID PARTICLE OF THE BACTERIOPHAGE G4: INDUCED STRUCTURAL CHANGES IN THE PRESENCE OF CALCIUM IONS AND FUNCTIONAL IMPLICATIONS | |
Keywords | COAT PROTEIN, ICOSAHEDRAL VIRUS | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1GFF | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | BACTERIOPHAGE G4 CAPSID PROTEINS GPF, GPG, GPJ | 1 | 417 | 3357 | 0 |
2 | Protein | BACTERIOPHAGE G4 CAPSID PROTEINS GPF, GPG, GPJ | 2 | 177 | 1325 | 0 |
3 | Protein | BACTERIOPHAGE G4 CAPSID PROTEINS GPF, GPG, GPJ | 3 | 12 | 97 | 0 |
total | 606 | 4779 | 0 |
Unit 1 | VAL10 PRO11 HIS12 ASP13 LEU14 SER15 HIS16 LEU17 VAL18 PHE19 GLU20 ALA21 GLY22 LYS23 ILE24 GLY25 ARG26 LEU27 LYS28 THR29 ILE30 SER31 TRP32 THR33 PRO34 VAL35 VAL36 ALA37 GLY38 ASP39 SER40 PHE41 GLU42 CYS43 ASP44 MET45 VAL46 GLY47 ALA48 ILE49 ARG50 LEU51 SER52 PRO53 LEU54 ARG55 ARG56 GLY57 LEU58 ALA59 VAL60 ASP61 SER62 ARG63 VAL64 ASP65 ILE66 PHE67 SER68 PHE69 TYR70 ILE71 PRO72 HIS73 ARG74 HIS75 ILE76 TYR77 GLY78 GLN79 GLN80 TRP81 ILE82 ASN83 PHE84 MET85 LYS86 ASP87 GLY88 VAL89 ASN90 ALA91 SER92 PRO93 LEU94 PRO95 PRO96 VAL97 THR98 CYS99 SER100 SER101 GLY102 TRP103 ASP104 SER105 ALA106 ALA107 TYR108 LEU109 GLY110 THR111 ILE112 PRO113 SER114 SER115 THR116 LEU117 LYS118 VAL119 PRO120 LYS121 PHE122 LEU123 HIS124 GLN125 GLY126 TYR127 LEU128 ASN129 ILE130 TYR131 ASN132 ASN133 TYR134 PHE135 LYS136 PRO137 PRO138 TRP139 SER140 ASP141 ASP142 LEU143 THR144 TYR145 ALA146 ASN147 PRO148 SER149 ASN150 MET151 PRO152 SER153 GLU154 ASP155 TYR156 LYS157 TRP158 GLY159 VAL160 ARG161 VAL162 ALA163 ASN164 LEU165 LYS166 SER167 ILE168 TRP169 THR170 ALA171 PRO172 LEU173 PRO174 PRO175 ASP176 THR177 ARG178 THR179 SER180 GLU181 ASN182 MET183 THR184 THR185 GLY186 THR187 SER188 THR189 ILE190 ASP191 ILE192 MET193 GLY194 LEU195 GLN196 ALA197 ALA198 TYR199 ALA200 LYS201 LEU202 HIS203 THR204 GLU205 GLN206 GLU207 ARG208 ASP209 TYR210 PHE211 MET212 THR213 ARG214 TYR215 ARG216 ASP217 ILE218 MET219 LYS220 GLU221 PHE222 GLY223 GLY224 HIS225 THR226 SER227 TYR228 ASP229 GLY230 ASP231 ASN232 ARG233 PRO234 LEU235 LEU236 LEU237 MET238 ARG239 SER240 GLU241 PHE242 TRP243 ALA244 SER245 GLY246 TYR247 ASP248 VAL249 ASP250 GLY251 THR252 ASP253 GLN254 SER255 SER256 LEU257 GLY258 GLN259 PHE260 SER261 GLY262 ARG263 VAL264 GLN265 GLN266 THR267 PHE268 ASN269 HIS270 LYS271 VAL272 PRO273 ARG274 PHE275 TYR276 VAL277 PRO278 GLU279 HIS280 GLY281 VAL282 ILE283 MET284 THR285 LEU286 ALA287 VAL288 THR289 ARG290 PHE291 PRO292 PRO293 THR294 HIS295 GLU296 MET297 GLU298 MET299 HIS300 TYR301 LEU302 VAL303 GLY304 LYS305 GLU306 ASN307 LEU308 THR309 TYR310 THR311 ASP312 ILE313 ALA314 CYS315 ASP316 PRO317 ALA318 LEU319 MET320 ALA321 ASN322 LEU323 PRO324 PRO325 ARG326 GLU327 VAL328 SER329 LEU330 LYS331 GLU332 PHE333 PHE334 HIS335 SER336 SER337 PRO338 ASP339 SER340 ALA341 LYS342 PHE343 LYS344 ILE345 ALA346 GLU347 GLY348 GLN349 TRP350 TYR351 ARG352 THR353 GLN354 PRO355 ASP356 ARG357 VAL358 ALA359 PHE360 PRO361 TYR362 ASN363 ALA364 LEU365 ASP366 GLY367 PHE368 PRO369 PHE370 TYR371 SER372 ALA373 LEU374 PRO375 SER376 THR377 ASP378 LEU379 LYS380 ASP381 ARG382 VAL383 LEU384 VAL385 ASN386 THR387 ASN388 ASN389 TYR390 ASP391 GLU392 ILE393 PHE394 GLN395 SER396 MET397 GLN398 LEU399 ALA400 HIS401 TRP402 ASN403 MET404 GLN405 THR406 LYS407 PHE408 ASN409 ILE410 ASN411 VAL412 TYR413 ARG414 HIS415 MET416 PRO417 THR418 THR419 ARG420 ASP421 SER422 ILE423 MET424 THR425 SER426 |
Unit 2 | MET1 PHE2 GLN3 LYS4 PHE5 ILE6 SER7 LYS8 HIS9 ASN10 ALA11 PRO12 ILE13 ASN14 SER15 THR16 GLN17 LEU18 ALA19 ALA20 THR21 LYS22 THR23 PRO24 ALA25 VAL26 ALA27 ALA28 PRO29 VAL30 LEU31 SER32 VAL33 PRO34 ASN35 LEU36 SER37 ARG38 SER39 THR40 ILE41 LEU42 ILE43 ASN44 ALA45 THR46 THR47 THR48 ALA49 VAL50 THR51 THR52 HIS53 SER54 GLY55 LEU56 CYS57 HIS58 VAL59 VAL60 ARG61 ILE62 ASP63 GLU64 THR65 ASN66 PRO67 THR68 ASN69 HIS70 HIS71 ALA72 LEU73 SER74 ILE75 ALA76 GLY77 SER78 LEU79 SER80 ASN81 VAL82 PRO83 ALA84 ASP85 MET86 ILE87 ALA88 PHE89 ALA90 ILE91 ARG92 PHE93 GLU94 VAL95 ALA96 ASP97 GLY98 VAL99 VAL100 PRO101 THR102 ALA103 VAL104 PRO105 ALA106 LEU107 TYR108 ASP109 VAL110 TYR111 PRO112 ILE113 GLU114 THR115 PHE116 ASN117 ASN118 GLY119 LYS120 ALA121 ILE122 SER123 PHE124 LYS125 ASP126 ALA127 VAL128 THR129 ILE130 ASP131 SER132 HIS133 PRO134 ARG135 THR136 VAL137 GLY138 ASN139 ASP140 VAL141 TYR142 ALA143 GLY144 ILE145 MET146 LEU147 TRP148 SER149 ASN150 ALA151 TRP152 THR153 ALA154 SER155 THR156 ILE157 SER158 GLY159 VAL160 LEU161 SER162 VAL163 ASN164 GLN165 VAL166 ASN167 ARG168 GLU169 ALA170 THR171 VAL172 LEU173 GLN174 PRO175 LEU176 LYS177 |
Unit 3 | GLY14 ALA15 ARG16 LEU17 TRP18 TYR19 VAL20 GLY21 GLY22 THR23 GLN24 TYR25 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |