1GDH - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A NAD-DEPENDENT D-GLYCERATE DEHYDROGENASE AT 2.4 ANGSTROMS RESOLUTION
• Keywords: OXIDOREDUCTASE(CHOH (D)-NAD(P)+ (A))
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1GDH	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	D-GLYCERATE DEHYDROGENASE	A	320	2416	0
2	Protein	D-GLYCERATE DEHYDROGENASE	B	320	2413	0
3	Ligand	D-GLYCERATE DEHYDROGENASE	A	1	0	5
4	Ligand	D-GLYCERATE DEHYDROGENASE	B	1	0	5
5	Water			197	0	197
total				839	4829	207

Proteins

Unit 1

LYS 2 LYS 3 LYS 4 ILE 5 LEU 6 ILE 7 THR 8 TRP 9 PRO 10 LEU 11 PRO 12 GLU 13 ALA 14 ALA 15 MET 16 ALA 17 ARG 18 ALA 19 ARG 20 GLU 21 SER 22 TYR 23 ASP 24 VAL 25 ILE 26 ALA 27 HIS 28 GLY 29 ASP 30 ASP 31 PRO 32 LYS 33 ILE 34 THR 35 ILE 36 ASP 37 GLU 38 MET 39 ILE 40 GLU 41 THR 42 ALA 43 LYS 44 SER 45 VAL 46 ASP 47 ALA 48 LEU 49 LEU 50 ILE 51 THR 52 LEU 53 ASN 54 GLU 55 LYS 56 CYS 57 ARG 58 LYS 59 GLU 60 VAL 61 ILE 62 ASP 63 ARG 64 ILE 65 PRO 66 GLU 67 ASN 68 ILE 69 LYS 70 CYS 71 ILE 72 SER 73 THR 74 TYR 75 SER 76 ILE 77 GLY 78 PHE 79 ASP 80 HIS 81 ILE 82 ASP 83 LEU 84 ASP 85 ALA 86 CYS 87 LYS 88 ALA 89 ARG 90 GLY 91 ILE 92 LYS 93 VAL 94 GLY 95 ASN 96 ALA 97 PRO 98 HIS 99 GLY 100 VAL 101 THR 102 VAL 103 ALA 104 THR 105 ALA 106 GLU 107 ILE 108 ALA 109 MET 110 LEU 111 LEU 112 LEU 113 LEU 114 GLY 115 SER 116 ALA 117 ARG 118 ARG 119 ALA 120 GLY 121 GLU 122 GLY 123 GLU 124 LYS 125 MET 126 ILE 127 ARG 128 THR 129 ARG 130 SER 131 TRP 132 PRO 133 GLY 134 TRP 135 GLU 136 PRO 137 LEU 138 GLU 139 LEU 140 VAL 141 GLY 142 GLU 143 LYS 144 LEU 145 ASP 146 ASN 147 LYS 148 THR 149 LEU 150 GLY 151 ILE 152 TYR 153 GLY 154 PHE 155 GLY 156 SER 157 ILE 158 GLY 159 GLN 160 ALA 161 LEU 162 ALA 163 LYS 164 ARG 165 ALA 166 GLN 167 GLY 168 PHE 169 ASP 170 MET 171 ASP 172 ILE 173 ASP 174 TYR 175 PHE 176 ASP 177 THR 178 HIS 179 ARG 180 ALA 181 SER 182 SER 183 SER 184 ASP 185 GLU 186 ALA 187 SER 188 TYR 189 GLN 190 ALA 191 THR 192 PHE 193 HIS 194 ASP 195 SER 196 LEU 197 ASP 198 SER 199 LEU 200 LEU 201 SER 202 VAL 203 SER 204 GLN 205 PHE 206 PHE 207 SER 208 LEU 209 ASN 210 ALA 211 PRO 212 SER 213 THR 214 PRO 215 GLU 216 THR 217 ARG 218 TYR 219 PHE 220 PHE 221 ASN 222 LYS 223 ALA 224 THR 225 ILE 226 LYS 227 SER 228 LEU 229 PRO 230 GLN 231 GLY 232 ALA 233 ILE 234 VAL 235 VAL 236 ASN 237 THR 238 ALA 239 ARG 240 GLY 241 ASP 242 LEU 243 VAL 244 ASP 245 ASN 246 GLU 247 LEU 248 VAL 249 VAL 250 ALA 251 ALA 252 LEU 253 GLU 254 ALA 255 GLY 256 ARG 257 LEU 258 ALA 259 TYR 260 ALA 261 GLY 262 PHE 263 ASP 264 VAL 265 PHE 266 ALA 267 GLY 268 GLU 269 PRO 270 ASN 271 ILE 272 ASN 273 GLU 274 GLY 275 TYR 276 TYR 277 ASP 278 LEU 279 PRO 280 ASN 281 THR 282 PHE 283 LEU 284 PHE 285 PRO 286 HIS 287 ILE 288 GLY 289 SER 290 ALA 291 ALA 292 THR 293 GLN 294 ALA 295 ARG 296 GLU 297 ASP 298 MET 299 ALA 300 HIS 301 GLN 302 ALA 303 ASN 304 ASP 305 LEU 306 ILE 307 ASP 308 ALA 309 LEU 310 PHE 311 GLY 312 GLY 313 ALA 314 ASP 315 MET 316 SER 317 TYR 318 ALA 319 LEU 320 ALA 321

Unit 2

LYS 2 LYS 3 LYS 4 ILE 5 LEU 6 ILE 7 THR 8 TRP 9 PRO 10 LEU 11 PRO 12 GLU 13 ALA 14 ALA 15 MET 16 ALA 17 ARG 18 ALA 19 ARG 20 GLU 21 SER 22 TYR 23 ASP 24 VAL 25 ILE 26 ALA 27 HIS 28 GLY 29 ASP 30 ASP 31 PRO 32 LYS 33 ILE 34 THR 35 ILE 36 ASP 37 GLU 38 MET 39 ILE 40 GLU 41 THR 42 ALA 43 LYS 44 SER 45 VAL 46 ASP 47 ALA 48 LEU 49 LEU 50 ILE 51 THR 52 LEU 53 ASN 54 GLU 55 LYS 56 CYS 57 ARG 58 LYS 59 GLU 60 VAL 61 ILE 62 ASP 63 ARG 64 ILE 65 PRO 66 GLU 67 ASN 68 ILE 69 LYS 70 CYS 71 ILE 72 SER 73 THR 74 TYR 75 SER 76 ILE 77 GLY 78 PHE 79 ASP 80 HIS 81 ILE 82 ASP 83 LEU 84 ASP 85 ALA 86 CYS 87 LYS 88 ALA 89 ARG 90 GLY 91 ILE 92 LYS 93 VAL 94 GLY 95 ASN 96 ALA 97 PRO 98 HIS 99 GLY 100 VAL 101 THR 102 VAL 103 ALA 104 THR 105 ALA 106 GLU 107 ILE 108 ALA 109 MET 110 LEU 111 LEU 112 LEU 113 LEU 114 GLY 115 SER 116 ALA 117 ARG 118 ARG 119 ALA 120 GLY 121 GLU 122 GLY 123 GLU 124 LYS 125 MET 126 ILE 127 ARG 128 THR 129 ARG 130 SER 131 TRP 132 PRO 133 GLY 134 TRP 135 GLU 136 PRO 137 LEU 138 GLU 139 LEU 140 VAL 141 GLY 142 GLU 143 LYS 144 LEU 145 ASP 146 ASN 147 LYS 148 THR 149 LEU 150 GLY 151 ILE 152 TYR 153 GLY 154 PHE 155 GLY 156 SER 157 ILE 158 GLY 159 GLN 160 ALA 161 LEU 162 ALA 163 LYS 164 ARG 165 ALA 166 GLN 167 GLY 168 PHE 169 ASP 170 MET 171 ASP 172 ILE 173 ASP 174 TYR 175 PHE 176 ASP 177 THR 178 HIS 179 ARG 180 ALA 181 SER 182 SER 183 SER 184 ASP 185 GLU 186 ALA 187 SER 188 TYR 189 GLN 190 ALA 191 THR 192 PHE 193 HIS 194 ASP 195 SER 196 LEU 197 ASP 198 SER 199 LEU 200 LEU 201 SER 202 VAL 203 SER 204 GLN 205 PHE 206 PHE 207 SER 208 LEU 209 ASN 210 ALA 211 PRO 212 SER 213 THR 214 PRO 215 GLU 216 THR 217 ARG 218 TYR 219 PHE 220 PHE 221 ASN 222 LYS 223 ALA 224 THR 225 ILE 226 LYS 227 SER 228 LEU 229 PRO 230 GLN 231 GLY 232 ALA 233 ILE 234 VAL 235 VAL 236 ASN 237 THR 238 ALA 239 ARG 240 GLY 241 ASP 242 LEU 243 VAL 244 ASP 245 ASN 246 GLU 247 LEU 248 VAL 249 VAL 250 ALA 251 ALA 252 LEU 253 GLU 254 ALA 255 GLY 256 ARG 257 LEU 258 ALA 259 TYR 260 ALA 261 GLY 262 PHE 263 ASP 264 VAL 265 PHE 266 ALA 267 GLY 268 GLU 269 PRO 270 ASN 271 ILE 272 ASN 273 GLU 274 GLY 275 TYR 276 TYR 277 ASP 278 LEU 279 PRO 280 ASN 281 THR 282 PHE 283 LEU 284 PHE 285 PRO 286 HIS 287 ILE 288 GLY 289 SER 290 ALA 291 ALA 292 THR 293 GLN 294 ALA 295 ARG 296 GLU 297 ASP 298 MET 299 ALA 300 HIS 301 GLN 302 ALA 303 ASN 304 ASP 305 LEU 306 ILE 307 ASP 308 ALA 309 LEU 310 PHE 311 GLY 312 GLY 313 ALA 314 ASP 315 MET 316 SER 317 TYR 318 ALA 319 LEU 320 ALA 321

Ligands

Unit 3	SO4 322
Unit 4	SO4 322