1GD8 - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CRYSTAL STRUCTURE OF BACTERIA-SPECIFIC L17 RIBOSOMAL PROTEIN.
• Keywords: TWO DOMAINS, RIBOSOMAL PROTEIN S8-LIKE DOMAIN, TRP REPRESSOR-LIKE DOMAIN, HELIX-TURN-HELIX MOTIF, TWO TYPES OF DIMERS, FOUR DIMERS OF EACH TYPE., RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL GENOMICS, RIBOSOME
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1GD8	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	50S RIBOSOMAL PROTEIN L17	A	105	855	0
2	Protein	50S RIBOSOMAL PROTEIN L17	B	105	855	0
3	Protein	50S RIBOSOMAL PROTEIN L17	C	105	855	0
4	Protein	50S RIBOSOMAL PROTEIN L17	D	105	855	0
5	Protein	50S RIBOSOMAL PROTEIN L17	E	105	855	0
6	Protein	50S RIBOSOMAL PROTEIN L17	F	105	855	0
7	Protein	50S RIBOSOMAL PROTEIN L17	G	105	855	0
8	Protein	50S RIBOSOMAL PROTEIN L17	H	105	855	0
9	Protein	50S RIBOSOMAL PROTEIN L17	I	105	855	0
10	Water			157	0	157
total				1102	7695	157

Proteins

Unit 1	SER 14 SER 15 HIS 16 ARG 17 LEU 18 ALA 19 LEU 20 TYR 21 ARG 22 ASN 23 GLN 24 ALA 25 LYS 26 SER 27 LEU 28 LEU 29 THR 30 HIS 31 GLY 32 ARG 33 ILE 34 THR 35 THR 36 THR 37 VAL 38 PRO 39 LYS 40 ALA 41 LYS 42 GLU 43 LEU 44 ARG 45 GLY 46 PHE 47 VAL 48 ASP 49 HIS 50 LEU 51 ILE 52 HIS 53 LEU 54 ALA 55 LYS 56 ARG 57 GLY 58 ASP 59 LEU 60 HIS 61 ALA 62 ARG 63 ARG 64 LEU 65 VAL 66 LEU 67 ARG 68 ASP 69 LEU 70 GLN 71 ASP 72 VAL 73 LYS 74 LEU 75 VAL 76 ARG 77 LYS 78 LEU 79 PHE 80 ASP 81 GLU 82 ILE 83 ALA 84 PRO 85 ARG 86 TYR 87 ARG 88 ASP 89 ARG 90 GLN 91 GLY 92 GLY 93 TYR 94 THR 95 ARG 96 VAL 97 LEU 98 LYS 99 LEU 100 ALA 101 GLU 102 ARG 103 ARG 104 ARG 105 GLY 106 ASP 107 GLY 108 ALA 109 PRO 110 LEU 111 ALA 112 LEU 113 VAL 114 GLU 115 LEU 116 VAL 117 GLU 118
Unit 2	SER 14 SER 15 HIS 16 ARG 17 LEU 18 ALA 19 LEU 20 TYR 21 ARG 22 ASN 23 GLN 24 ALA 25 LYS 26 SER 27 LEU 28 LEU 29 THR 30 HIS 31 GLY 32 ARG 33 ILE 34 THR 35 THR 36 THR 37 VAL 38 PRO 39 LYS 40 ALA 41 LYS 42 GLU 43 LEU 44 ARG 45 GLY 46 PHE 47 VAL 48 ASP 49 HIS 50 LEU 51 ILE 52 HIS 53 LEU 54 ALA 55 LYS 56 ARG 57 GLY 58 ASP 59 LEU 60 HIS 61 ALA 62 ARG 63 ARG 64 LEU 65 VAL 66 LEU 67 ARG 68 ASP 69 LEU 70 GLN 71 ASP 72 VAL 73 LYS 74 LEU 75 VAL 76 ARG 77 LYS 78 LEU 79 PHE 80 ASP 81 GLU 82 ILE 83 ALA 84 PRO 85 ARG 86 TYR 87 ARG 88 ASP 89 ARG 90 GLN 91 GLY 92 GLY 93 TYR 94 THR 95 ARG 96 VAL 97 LEU 98 LYS 99 LEU 100 ALA 101 GLU 102 ARG 103 ARG 104 ARG 105 GLY 106 ASP 107 GLY 108 ALA 109 PRO 110 LEU 111 ALA 112 LEU 113 VAL 114 GLU 115 LEU 116 VAL 117 GLU 118
Unit 3	SER 14 SER 15 HIS 16 ARG 17 LEU 18 ALA 19 LEU 20 TYR 21 ARG 22 ASN 23 GLN 24 ALA 25 LYS 26 SER 27 LEU 28 LEU 29 THR 30 HIS 31 GLY 32 ARG 33 ILE 34 THR 35 THR 36 THR 37 VAL 38 PRO 39 LYS 40 ALA 41 LYS 42 GLU 43 LEU 44 ARG 45 GLY 46 PHE 47 VAL 48 ASP 49 HIS 50 LEU 51 ILE 52 HIS 53 LEU 54 ALA 55 LYS 56 ARG 57 GLY 58 ASP 59 LEU 60 HIS 61 ALA 62 ARG 63 ARG 64 LEU 65 VAL 66 LEU 67 ARG 68 ASP 69 LEU 70 GLN 71 ASP 72 VAL 73 LYS 74 LEU 75 VAL 76 ARG 77 LYS 78 LEU 79 PHE 80 ASP 81 GLU 82 ILE 83 ALA 84 PRO 85 ARG 86 TYR 87 ARG 88 ASP 89 ARG 90 GLN 91 GLY 92 GLY 93 TYR 94 THR 95 ARG 96 VAL 97 LEU 98 LYS 99 LEU 100 ALA 101 GLU 102 ARG 103 ARG 104 ARG 105 GLY 106 ASP 107 GLY 108 ALA 109 PRO 110 LEU 111 ALA 112 LEU 113 VAL 114 GLU 115 LEU 116 VAL 117 GLU 118
Unit 4	SER 14 SER 15 HIS 16 ARG 17 LEU 18 ALA 19 LEU 20 TYR 21 ARG 22 ASN 23 GLN 24 ALA 25 LYS 26 SER 27 LEU 28 LEU 29 THR 30 HIS 31 GLY 32 ARG 33 ILE 34 THR 35 THR 36 THR 37 VAL 38 PRO 39 LYS 40 ALA 41 LYS 42 GLU 43 LEU 44 ARG 45 GLY 46 PHE 47 VAL 48 ASP 49 HIS 50 LEU 51 ILE 52 HIS 53 LEU 54 ALA 55 LYS 56 ARG 57 GLY 58 ASP 59 LEU 60 HIS 61 ALA 62 ARG 63 ARG 64 LEU 65 VAL 66 LEU 67 ARG 68 ASP 69 LEU 70 GLN 71 ASP 72 VAL 73 LYS 74 LEU 75 VAL 76 ARG 77 LYS 78 LEU 79 PHE 80 ASP 81 GLU 82 ILE 83 ALA 84 PRO 85 ARG 86 TYR 87 ARG 88 ASP 89 ARG 90 GLN 91 GLY 92 GLY 93 TYR 94 THR 95 ARG 96 VAL 97 LEU 98 LYS 99 LEU 100 ALA 101 GLU 102 ARG 103 ARG 104 ARG 105 GLY 106 ASP 107 GLY 108 ALA 109 PRO 110 LEU 111 ALA 112 LEU 113 VAL 114 GLU 115 LEU 116 VAL 117 GLU 118
Unit 5	SER 14 SER 15 HIS 16 ARG 17 LEU 18 ALA 19 LEU 20 TYR 21 ARG 22 ASN 23 GLN 24 ALA 25 LYS 26 SER 27 LEU 28 LEU 29 THR 30 HIS 31 GLY 32 ARG 33 ILE 34 THR 35 THR 36 THR 37 VAL 38 PRO 39 LYS 40 ALA 41 LYS 42 GLU 43 LEU 44 ARG 45 GLY 46 PHE 47 VAL 48 ASP 49 HIS 50 LEU 51 ILE 52 HIS 53 LEU 54 ALA 55 LYS 56 ARG 57 GLY 58 ASP 59 LEU 60 HIS 61 ALA 62 ARG 63 ARG 64 LEU 65 VAL 66 LEU 67 ARG 68 ASP 69 LEU 70 GLN 71 ASP 72 VAL 73 LYS 74 LEU 75 VAL 76 ARG 77 LYS 78 LEU 79 PHE 80 ASP 81 GLU 82 ILE 83 ALA 84 PRO 85 ARG 86 TYR 87 ARG 88 ASP 89 ARG 90 GLN 91 GLY 92 GLY 93 TYR 94 THR 95 ARG 96 VAL 97 LEU 98 LYS 99 LEU 100 ALA 101 GLU 102 ARG 103 ARG 104 ARG 105 GLY 106 ASP 107 GLY 108 ALA 109 PRO 110 LEU 111 ALA 112 LEU 113 VAL 114 GLU 115 LEU 116 VAL 117 GLU 118
Unit 6	SER 14 SER 15 HIS 16 ARG 17 LEU 18 ALA 19 LEU 20 TYR 21 ARG 22 ASN 23 GLN 24 ALA 25 LYS 26 SER 27 LEU 28 LEU 29 THR 30 HIS 31 GLY 32 ARG 33 ILE 34 THR 35 THR 36 THR 37 VAL 38 PRO 39 LYS 40 ALA 41 LYS 42 GLU 43 LEU 44 ARG 45 GLY 46 PHE 47 VAL 48 ASP 49 HIS 50 LEU 51 ILE 52 HIS 53 LEU 54 ALA 55 LYS 56 ARG 57 GLY 58 ASP 59 LEU 60 HIS 61 ALA 62 ARG 63 ARG 64 LEU 65 VAL 66 LEU 67 ARG 68 ASP 69 LEU 70 GLN 71 ASP 72 VAL 73 LYS 74 LEU 75 VAL 76 ARG 77 LYS 78 LEU 79 PHE 80 ASP 81 GLU 82 ILE 83 ALA 84 PRO 85 ARG 86 TYR 87 ARG 88 ASP 89 ARG 90 GLN 91 GLY 92 GLY 93 TYR 94 THR 95 ARG 96 VAL 97 LEU 98 LYS 99 LEU 100 ALA 101 GLU 102 ARG 103 ARG 104 ARG 105 GLY 106 ASP 107 GLY 108 ALA 109 PRO 110 LEU 111 ALA 112 LEU 113 VAL 114 GLU 115 LEU 116 VAL 117 GLU 118
Unit 7	SER 14 SER 15 HIS 16 ARG 17 LEU 18 ALA 19 LEU 20 TYR 21 ARG 22 ASN 23 GLN 24 ALA 25 LYS 26 SER 27 LEU 28 LEU 29 THR 30 HIS 31 GLY 32 ARG 33 ILE 34 THR 35 THR 36 THR 37 VAL 38 PRO 39 LYS 40 ALA 41 LYS 42 GLU 43 LEU 44 ARG 45 GLY 46 PHE 47 VAL 48 ASP 49 HIS 50 LEU 51 ILE 52 HIS 53 LEU 54 ALA 55 LYS 56 ARG 57 GLY 58 ASP 59 LEU 60 HIS 61 ALA 62 ARG 63 ARG 64 LEU 65 VAL 66 LEU 67 ARG 68 ASP 69 LEU 70 GLN 71 ASP 72 VAL 73 LYS 74 LEU 75 VAL 76 ARG 77 LYS 78 LEU 79 PHE 80 ASP 81 GLU 82 ILE 83 ALA 84 PRO 85 ARG 86 TYR 87 ARG 88 ASP 89 ARG 90 GLN 91 GLY 92 GLY 93 TYR 94 THR 95 ARG 96 VAL 97 LEU 98 LYS 99 LEU 100 ALA 101 GLU 102 ARG 103 ARG 104 ARG 105 GLY 106 ASP 107 GLY 108 ALA 109 PRO 110 LEU 111 ALA 112 LEU 113 VAL 114 GLU 115 LEU 116 VAL 117 GLU 118
Unit 8	SER 14 SER 15 HIS 16 ARG 17 LEU 18 ALA 19 LEU 20 TYR 21 ARG 22 ASN 23 GLN 24 ALA 25 LYS 26 SER 27 LEU 28 LEU 29 THR 30 HIS 31 GLY 32 ARG 33 ILE 34 THR 35 THR 36 THR 37 VAL 38 PRO 39 LYS 40 ALA 41 LYS 42 GLU 43 LEU 44 ARG 45 GLY 46 PHE 47 VAL 48 ASP 49 HIS 50 LEU 51 ILE 52 HIS 53 LEU 54 ALA 55 LYS 56 ARG 57 GLY 58 ASP 59 LEU 60 HIS 61 ALA 62 ARG 63 ARG 64 LEU 65 VAL 66 LEU 67 ARG 68 ASP 69 LEU 70 GLN 71 ASP 72 VAL 73 LYS 74 LEU 75 VAL 76 ARG 77 LYS 78 LEU 79 PHE 80 ASP 81 GLU 82 ILE 83 ALA 84 PRO 85 ARG 86 TYR 87 ARG 88 ASP 89 ARG 90 GLN 91 GLY 92 GLY 93 TYR 94 THR 95 ARG 96 VAL 97 LEU 98 LYS 99 LEU 100 ALA 101 GLU 102 ARG 103 ARG 104 ARG 105 GLY 106 ASP 107 GLY 108 ALA 109 PRO 110 LEU 111 ALA 112 LEU 113 VAL 114 GLU 115 LEU 116 VAL 117 GLU 118
Unit 9	SER 14 SER 15 HIS 16 ARG 17 LEU 18 ALA 19 LEU 20 TYR 21 ARG 22 ASN 23 GLN 24 ALA 25 LYS 26 SER 27 LEU 28 LEU 29 THR 30 HIS 31 GLY 32 ARG 33 ILE 34 THR 35 THR 36 THR 37 VAL 38 PRO 39 LYS 40 ALA 41 LYS 42 GLU 43 LEU 44 ARG 45 GLY 46 PHE 47 VAL 48 ASP 49 HIS 50 LEU 51 ILE 52 HIS 53 LEU 54 ALA 55 LYS 56 ARG 57 GLY 58 ASP 59 LEU 60 HIS 61 ALA 62 ARG 63 ARG 64 LEU 65 VAL 66 LEU 67 ARG 68 ASP 69 LEU 70 GLN 71 ASP 72 VAL 73 LYS 74 LEU 75 VAL 76 ARG 77 LYS 78 LEU 79 PHE 80 ASP 81 GLU 82 ILE 83 ALA 84 PRO 85 ARG 86 TYR 87 ARG 88 ASP 89 ARG 90 GLN 91 GLY 92 GLY 93 TYR 94 THR 95 ARG 96 VAL 97 LEU 98 LYS 99 LEU 100 ALA 101 GLU 102 ARG 103 ARG 104 ARG 105 GLY 106 ASP 107 GLY 108 ALA 109 PRO 110 LEU 111 ALA 112 LEU 113 VAL 114 GLU 115 LEU 116 VAL 117 GLU 118