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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF DTDP-D-GLUCOSE 4,6-DEHYDRATASE (RML SALMONELLA ENTERICA SEROVAR TYPHIMURIUM
Keywords ROSSMANN FOLD, PROTEIN-NAD COMPLEX, SHORT CHAIN DEHYDROGENAS
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1G1A     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  A 352 2799 0
2  Protein   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  B 352 2799 0
3  Protein   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  C 352 2799 0
4  Protein   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  D 352 2799 0
5  Ligand   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  A 3 0 54
6  Ligand   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  B 4 0 59
7  Ligand   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  C 3 0 54
8  Ligand   DTDP-D-GLUCOSE 4,6-DEHYDRATASE  D 3 0 54
9 Water     512 0 512
total       1933 11196 733
Proteins
Unit 1 MET1 LYS2 ILE3 LEU4 ILE5 THR6 GLY7 GLY8 ALA9 GLY10 PHE11 ILE12 GLY13 SER14 ALA15 VAL16 VAL17 ARG18 HIS19 ILE20 ILE21 LYS22 ASN23 THR24 GLN25 ASP26 THR27 VAL28 VAL29 ASN30 ILE31 ASP32 LYS33 LEU34 THR35 TYR36 ALA37 GLY38 ASN39 LEU40 GLU41 SER42 LEU43 SER44 ASP45 ILE46 SER47 GLU48 SER49 ASN50 ARG51 TYR52 ASN53 PHE54 GLU55 HIS56 ALA57 ASP58 ILE59 CYS60 ASP61 SER62 ALA63 GLU64 ILE65 THR66 ARG67 ILE68 PHE69 GLU70 GLN71 TYR72 GLN73 PRO74 ASP75 ALA76 VAL77 MET78 HIS79 LEU80 ALA81 ALA82 GLU83 SER84 HIS85 VAL86 ASP87 ARG88 SER89 ILE90 THR91 GLY92 PRO93 ALA94 ALA95 PHE96 ILE97 GLU98 THR99 ASN100 ILE101 VAL102 GLY103 THR104 TYR105 ALA106 LEU107 LEU108 GLU109 VAL110 ALA111 ARG112 LYS113 TYR114 TRP115 SER116 ALA117 LEU118 GLY119 GLU120 ASP121 LYS122 LYS123 ASN124 ASN125 PHE126 ARG127 PHE128 HIS129 HIS130 ILE131 SER132 THR133 ASP134 GLU135 VAL136 TYR137 GLY138 ASP139 LEU140 PRO141 HIS142 PRO143 ASP144 GLU145 VAL146 GLU147 ASN148 SER149 VAL150 THR151 LEU152 PRO153 LEU154 PHE155 THR156 GLU157 THR158 THR159 ALA160 TYR161 ALA162 PRO163 SER164 SER165 PRO166 TYR167 SER168 ALA169 SER170 LYS171 ALA172 SER173 SER174 ASP175 HIS176 LEU177 VAL178 ARG179 ALA180 TRP181 ARG182 ARG183 THR184 TYR185 GLY186 LEU187 PRO188 THR189 ILE190 VAL191 THR192 ASN193 CYS194 SER195 ASN196 ASN197 TYR198 GLY199 PRO200 TYR201 HIS202 PHE203 PRO204 GLU205 LYS206 LEU207 ILE208 PRO209 LEU210 VAL211 ILE212 LEU213 ASN214 ALA215 LEU216 GLU217 GLY218 LYS219 PRO220 LEU221 PRO222 ILE223 TYR224 GLY225 LYS226 GLY227 ASP228 GLN229 ILE230 ARG231 ASP232 TRP233 LEU234 TYR235 VAL236 GLU237 ASP238 HIS239 ALA240 ARG241 ALA242 LEU243 HIS244 MET245 VAL246 VAL247 THR248 GLU249 GLY250 LYS251 ALA252 GLY253 GLU254 THR255 TYR256 ASN257 ILE258 GLY259 GLY260 HIS261 ASN262 GLU263 LYS264 LYS265 ASN266 LEU267 ASP268 VAL269 VAL270 PHE271 THR272 ILE273 CYS274 ASP275 LEU276 LEU277 ASP278 GLU279 ILE280 VAL281 PRO282 LYS283 ALA284 THR285 SER286 TYR287 ARG288 GLU289 GLN290 ILE291 THR292 TYR293 VAL294 ALA295 ASP296 ARG297 PRO298 GLY299 HIS300 ASP301 ARG302 ARG303 TYR304 ALA305 ILE306 ASP307 ALA308 GLY309 LYS310 ILE311 SER312 ARG313 GLU314 LEU315 GLY316 TRP317 LYS318 PRO319 LEU320 GLU321 THR322 PHE323 GLU324 SER325 GLY326 ILE327 ARG328 LYS329 THR330 VAL331 GLU332 TRP333 TYR334 LEU335 ALA336 ASN337 THR338 GLN339 TRP340 VAL341 ASN342 ASN343 VAL344 LYS345 SER346 GLY347 ALA348 TYR349 GLN350 SER351 TRP352
Unit 2 MET1 LYS2 ILE3 LEU4 ILE5 THR6 GLY7 GLY8 ALA9 GLY10 PHE11 ILE12 GLY13 SER14 ALA15 VAL16 VAL17 ARG18 HIS19 ILE20 ILE21 LYS22 ASN23 THR24 GLN25 ASP26 THR27 VAL28 VAL29 ASN30 ILE31 ASP32 LYS33 LEU34 THR35 TYR36 ALA37 GLY38 ASN39 LEU40 GLU41 SER42 LEU43 SER44 ASP45 ILE46 SER47 GLU48 SER49 ASN50 ARG51 TYR52 ASN53 PHE54 GLU55 HIS56 ALA57 ASP58 ILE59 CYS60 ASP61 SER62 ALA63 GLU64 ILE65 THR66 ARG67 ILE68 PHE69 GLU70 GLN71 TYR72 GLN73 PRO74 ASP75 ALA76 VAL77 MET78 HIS79 LEU80 ALA81 ALA82 GLU83 SER84 HIS85 VAL86 ASP87 ARG88 SER89 ILE90 THR91 GLY92 PRO93 ALA94 ALA95 PHE96 ILE97 GLU98 THR99 ASN100 ILE101 VAL102 GLY103 THR104 TYR105 ALA106 LEU107 LEU108 GLU109 VAL110 ALA111 ARG112 LYS113 TYR114 TRP115 SER116 ALA117 LEU118 GLY119 GLU120 ASP121 LYS122 LYS123 ASN124 ASN125 PHE126 ARG127 PHE128 HIS129 HIS130 ILE131 SER132 THR133 ASP134 GLU135 VAL136 TYR137 GLY138 ASP139 LEU140 PRO141 HIS142 PRO143 ASP144 GLU145 VAL146 GLU147 ASN148 SER149 VAL150 THR151 LEU152 PRO153 LEU154 PHE155 THR156 GLU157 THR158 THR159 ALA160 TYR161 ALA162 PRO163 SER164 SER165 PRO166 TYR167 SER168 ALA169 SER170 LYS171 ALA172 SER173 SER174 ASP175 HIS176 LEU177 VAL178 ARG179 ALA180 TRP181 ARG182 ARG183 THR184 TYR185 GLY186 LEU187 PRO188 THR189 ILE190 VAL191 THR192 ASN193 CYS194 SER195 ASN196 ASN197 TYR198 GLY199 PRO200 TYR201 HIS202 PHE203 PRO204 GLU205 LYS206 LEU207 ILE208 PRO209 LEU210 VAL211 ILE212 LEU213 ASN214 ALA215 LEU216 GLU217 GLY218 LYS219 PRO220 LEU221 PRO222 ILE223 TYR224 GLY225 LYS226 GLY227 ASP228 GLN229 ILE230 ARG231 ASP232 TRP233 LEU234 TYR235 VAL236 GLU237 ASP238 HIS239 ALA240 ARG241 ALA242 LEU243 HIS244 MET245 VAL246 VAL247 THR248 GLU249 GLY250 LYS251 ALA252 GLY253 GLU254 THR255 TYR256 ASN257 ILE258 GLY259 GLY260 HIS261 ASN262 GLU263 LYS264 LYS265 ASN266 LEU267 ASP268 VAL269 VAL270 PHE271 THR272 ILE273 CYS274 ASP275 LEU276 LEU277 ASP278 GLU279 ILE280 VAL281 PRO282 LYS283 ALA284 THR285 SER286 TYR287 ARG288 GLU289 GLN290 ILE291 THR292 TYR293 VAL294 ALA295 ASP296 ARG297 PRO298 GLY299 HIS300 ASP301 ARG302 ARG303 TYR304 ALA305 ILE306 ASP307 ALA308 GLY309 LYS310 ILE311 SER312 ARG313 GLU314 LEU315 GLY316 TRP317 LYS318 PRO319 LEU320 GLU321 THR322 PHE323 GLU324 SER325 GLY326 ILE327 ARG328 LYS329 THR330 VAL331 GLU332 TRP333 TYR334 LEU335 ALA336 ASN337 THR338 GLN339 TRP340 VAL341 ASN342 ASN343 VAL344 LYS345 SER346 GLY347 ALA348 TYR349 GLN350 SER351 TRP352
Unit 3 MET1 LYS2 ILE3 LEU4 ILE5 THR6 GLY7 GLY8 ALA9 GLY10 PHE11 ILE12 GLY13 SER14 ALA15 VAL16 VAL17 ARG18 HIS19 ILE20 ILE21 LYS22 ASN23 THR24 GLN25 ASP26 THR27 VAL28 VAL29 ASN30 ILE31 ASP32 LYS33 LEU34 THR35 TYR36 ALA37 GLY38 ASN39 LEU40 GLU41 SER42 LEU43 SER44 ASP45 ILE46 SER47 GLU48 SER49 ASN50 ARG51 TYR52 ASN53 PHE54 GLU55 HIS56 ALA57 ASP58 ILE59 CYS60 ASP61 SER62 ALA63 GLU64 ILE65 THR66 ARG67 ILE68 PHE69 GLU70 GLN71 TYR72 GLN73 PRO74 ASP75 ALA76 VAL77 MET78 HIS79 LEU80 ALA81 ALA82 GLU83 SER84 HIS85 VAL86 ASP87 ARG88 SER89 ILE90 THR91 GLY92 PRO93 ALA94 ALA95 PHE96 ILE97 GLU98 THR99 ASN100 ILE101 VAL102 GLY103 THR104 TYR105 ALA106 LEU107 LEU108 GLU109 VAL110 ALA111 ARG112 LYS113 TYR114 TRP115 SER116 ALA117 LEU118 GLY119 GLU120 ASP121 LYS122 LYS123 ASN124 ASN125 PHE126 ARG127 PHE128 HIS129 HIS130 ILE131 SER132 THR133 ASP134 GLU135 VAL136 TYR137 GLY138 ASP139 LEU140 PRO141 HIS142 PRO143 ASP144 GLU145 VAL146 GLU147 ASN148 SER149 VAL150 THR151 LEU152 PRO153 LEU154 PHE155 THR156 GLU157 THR158 THR159 ALA160 TYR161 ALA162 PRO163 SER164 SER165 PRO166 TYR167 SER168 ALA169 SER170 LYS171 ALA172 SER173 SER174 ASP175 HIS176 LEU177 VAL178 ARG179 ALA180 TRP181 ARG182 ARG183 THR184 TYR185 GLY186 LEU187 PRO188 THR189 ILE190 VAL191 THR192 ASN193 CYS194 SER195 ASN196 ASN197 TYR198 GLY199 PRO200 TYR201 HIS202 PHE203 PRO204 GLU205 LYS206 LEU207 ILE208 PRO209 LEU210 VAL211 ILE212 LEU213 ASN214 ALA215 LEU216 GLU217 GLY218 LYS219 PRO220 LEU221 PRO222 ILE223 TYR224 GLY225 LYS226 GLY227 ASP228 GLN229 ILE230 ARG231 ASP232 TRP233 LEU234 TYR235 VAL236 GLU237 ASP238 HIS239 ALA240 ARG241 ALA242 LEU243 HIS244 MET245 VAL246 VAL247 THR248 GLU249 GLY250 LYS251 ALA252 GLY253 GLU254 THR255 TYR256 ASN257 ILE258 GLY259 GLY260 HIS261 ASN262 GLU263 LYS264 LYS265 ASN266 LEU267 ASP268 VAL269 VAL270 PHE271 THR272 ILE273 CYS274 ASP275 LEU276 LEU277 ASP278 GLU279 ILE280 VAL281 PRO282 LYS283 ALA284 THR285 SER286 TYR287 ARG288 GLU289 GLN290 ILE291 THR292 TYR293 VAL294 ALA295 ASP296 ARG297 PRO298 GLY299 HIS300 ASP301 ARG302 ARG303 TYR304 ALA305 ILE306 ASP307 ALA308 GLY309 LYS310 ILE311 SER312 ARG313 GLU314 LEU315 GLY316 TRP317 LYS318 PRO319 LEU320 GLU321 THR322 PHE323 GLU324 SER325 GLY326 ILE327 ARG328 LYS329 THR330 VAL331 GLU332 TRP333 TYR334 LEU335 ALA336 ASN337 THR338 GLN339 TRP340 VAL341 ASN342 ASN343 VAL344 LYS345 SER346 GLY347 ALA348 TYR349 GLN350 SER351 TRP352
Unit 4 MET1 LYS2 ILE3 LEU4 ILE5 THR6 GLY7 GLY8 ALA9 GLY10 PHE11 ILE12 GLY13 SER14 ALA15 VAL16 VAL17 ARG18 HIS19 ILE20 ILE21 LYS22 ASN23 THR24 GLN25 ASP26 THR27 VAL28 VAL29 ASN30 ILE31 ASP32 LYS33 LEU34 THR35 TYR36 ALA37 GLY38 ASN39 LEU40 GLU41 SER42 LEU43 SER44 ASP45 ILE46 SER47 GLU48 SER49 ASN50 ARG51 TYR52 ASN53 PHE54 GLU55 HIS56 ALA57 ASP58 ILE59 CYS60 ASP61 SER62 ALA63 GLU64 ILE65 THR66 ARG67 ILE68 PHE69 GLU70 GLN71 TYR72 GLN73 PRO74 ASP75 ALA76 VAL77 MET78 HIS79 LEU80 ALA81 ALA82 GLU83 SER84 HIS85 VAL86 ASP87 ARG88 SER89 ILE90 THR91 GLY92 PRO93 ALA94 ALA95 PHE96 ILE97 GLU98 THR99 ASN100 ILE101 VAL102 GLY103 THR104 TYR105 ALA106 LEU107 LEU108 GLU109 VAL110 ALA111 ARG112 LYS113 TYR114 TRP115 SER116 ALA117 LEU118 GLY119 GLU120 ASP121 LYS122 LYS123 ASN124 ASN125 PHE126 ARG127 PHE128 HIS129 HIS130 ILE131 SER132 THR133 ASP134 GLU135 VAL136 TYR137 GLY138 ASP139 LEU140 PRO141 HIS142 PRO143 ASP144 GLU145 VAL146 GLU147 ASN148 SER149 VAL150 THR151 LEU152 PRO153 LEU154 PHE155 THR156 GLU157 THR158 THR159 ALA160 TYR161 ALA162 PRO163 SER164 SER165 PRO166 TYR167 SER168 ALA169 SER170 LYS171 ALA172 SER173 SER174 ASP175 HIS176 LEU177 VAL178 ARG179 ALA180 TRP181 ARG182 ARG183 THR184 TYR185 GLY186 LEU187 PRO188 THR189 ILE190 VAL191 THR192 ASN193 CYS194 SER195 ASN196 ASN197 TYR198 GLY199 PRO200 TYR201 HIS202 PHE203 PRO204 GLU205 LYS206 LEU207 ILE208 PRO209 LEU210 VAL211 ILE212 LEU213 ASN214 ALA215 LEU216 GLU217 GLY218 LYS219 PRO220 LEU221 PRO222 ILE223 TYR224 GLY225 LYS226 GLY227 ASP228 GLN229 ILE230 ARG231 ASP232 TRP233 LEU234 TYR235 VAL236 GLU237 ASP238 HIS239 ALA240 ARG241 ALA242 LEU243 HIS244 MET245 VAL246 VAL247 THR248 GLU249 GLY250 LYS251 ALA252 GLY253 GLU254 THR255 TYR256 ASN257 ILE258 GLY259 GLY260 HIS261 ASN262 GLU263 LYS264 LYS265 ASN266 LEU267 ASP268 VAL269 VAL270 PHE271 THR272 ILE273 CYS274 ASP275 LEU276 LEU277 ASP278 GLU279 ILE280 VAL281 PRO282 LYS283 ALA284 THR285 SER286 TYR287 ARG288 GLU289 GLN290 ILE291 THR292 TYR293 VAL294 ALA295 ASP296 ARG297 PRO298 GLY299 HIS300 ASP301 ARG302 ARG303 TYR304 ALA305 ILE306 ASP307 ALA308 GLY309 LYS310 ILE311 SER312 ARG313 GLU314 LEU315 GLY316 TRP317 LYS318 PRO319 LEU320 GLU321 THR322 PHE323 GLU324 SER325 GLY326 ILE327 ARG328 LYS329 THR330 VAL331 GLU332 TRP333 TYR334 LEU335 ALA336 ASN337 THR338 GLN339 TRP340 VAL341 ASN342 ASN343 VAL344 LYS345 SER346 GLY347 ALA348 TYR349 GLN350 SER351 TRP352
Ligands
Unit 5 NAD400 SO45001 SO45005
Unit 6 NAD500 SO45002 SO45006 SO45009
Unit 7 NAD600 SO45003 SO45007
Unit 8 NAD700 SO45004 SO45008
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany