1FYF - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A TRUNCATED FORM OF THREONYL-TRNA SYNTHETASE COMPLEXED WITH A SERYL ADENYLATE ANALOG
• Keywords: AMINO ACID RECOGNITION, ZINC ION, TRNA-SYNTHETASE, ADENYLATE ANALOG, DELETION MUTANT, LIGASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1FYF	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	THREONYL-TRNA SYNTHETASE	A	401	3265	0
2	Protein	THREONYL-TRNA SYNTHETASE	B	401	3268	0
3	Ligand	THREONYL-TRNA SYNTHETASE	A	2	0	30
4	Ligand	THREONYL-TRNA SYNTHETASE	B	2	0	30
5	Water			534	0	534
total				1340	6533	594

Proteins

Unit 1

ARG 242 ASP 243 HIS 244 ARG 245 LYS 246 ILE 247 GLY 248 LYS 249 GLN 250 LEU 251 ASP 252 LEU 253 TYR 254 HIS 255 MET 256 GLN 257 GLU 258 GLU 259 ALA 260 PRO 261 GLY 262 MET 263 VAL 264 PHE 265 TRP 266 HIS 267 ASN 268 ASP 269 GLY 270 TRP 271 THR 272 ILE 273 PHE 274 ARG 275 GLU 276 LEU 277 GLU 278 VAL 279 PHE 280 VAL 281 ARG 282 SER 283 LYS 284 LEU 285 LYS 286 GLU 287 TYR 288 GLN 289 TYR 290 GLN 291 GLU 292 VAL 293 LYS 294 GLY 295 PRO 296 PHE 297 MET 298 MET 299 ASP 300 ARG 301 VAL 302 LEU 303 TRP 304 GLU 305 LYS 306 THR 307 GLY 308 HIS 309 TRP 310 ASP 311 ASN 312 TYR 313 LYS 314 ASP 315 ALA 316 MET 317 PHE 318 THR 319 THR 320 SER 321 SER 322 GLU 323 ASN 324 ARG 325 GLU 326 TYR 327 CYS 328 ILE 329 LYS 330 PRO 331 MET 332 ASN 333 CYS 334 PRO 335 GLY 336 HIS 337 VAL 338 GLN 339 ILE 340 PHE 341 ASN 342 GLN 343 GLY 344 LEU 345 LYS 346 SER 347 TYR 348 ARG 349 ASP 350 LEU 351 PRO 352 LEU 353 ARG 354 MET 355 ALA 356 GLU 357 PHE 358 GLY 359 SER 360 CYS 361 HIS 362 ARG 363 ASN 364 GLU 365 PRO 366 SER 367 GLY 368 SER 369 LEU 370 HIS 371 GLY 372 LEU 373 MET 374 ARG 375 VAL 376 ARG 377 GLY 378 PHE 379 THR 380 GLN 381 ASP 382 ASP 383 ALA 384 HIS 385 ILE 386 PHE 387 CYS 388 THR 389 GLU 390 GLU 391 GLN 392 ILE 393 ARG 394 ASP 395 GLU 396 VAL 397 ASN 398 GLY 399 CYS 400 ILE 401 ARG 402 LEU 403 VAL 404 TYR 405 ASP 406 MET 407 TYR 408 SER 409 THR 410 PHE 411 GLY 412 PHE 413 GLU 414 LYS 415 ILE 416 VAL 417 VAL 418 LYS 419 LEU 420 SER 421 THR 422 ARG 423 PRO 424 GLU 425 LYS 426 ARG 427 ILE 428 GLY 429 SER 430 ASP 431 GLU 432 MET 433 TRP 434 ASP 435 ARG 436 ALA 437 GLU 438 ALA 439 ASP 440 LEU 441 ALA 442 VAL 443 ALA 444 LEU 445 GLU 446 GLU 447 ASN 448 ASN 449 ILE 450 PRO 451 PHE 452 GLU 453 TYR 454 GLN 455 LEU 456 GLY 457 GLU 458 GLY 459 ALA 460 PHE 461 TYR 462 GLY 463 PRO 464 LYS 465 ILE 466 GLU 467 PHE 468 THR 469 LEU 470 TYR 471 ASP 472 CYS 473 LEU 474 ASP 475 ARG 476 ALA 477 TRP 478 GLN 479 CYS 480 GLY 481 THR 482 VAL 483 GLN 484 LEU 485 ASP 486 PHE 487 SER 488 LEU 489 PRO 490 SER 491 ARG 492 LEU 493 SER 494 ALA 495 SER 496 TYR 497 VAL 498 GLY 499 GLU 500 ASP 501 ASN 502 GLU 503 ARG 504 LYS 505 VAL 506 PRO 507 VAL 508 MET 509 ILE 510 HIS 511 ARG 512 ALA 513 ILE 514 LEU 515 GLY 516 SER 517 MET 518 GLU 519 ARG 520 PHE 521 ILE 522 GLY 523 ILE 524 LEU 525 THR 526 GLU 527 GLU 528 PHE 529 ALA 530 GLY 531 PHE 532 PHE 533 PRO 534 THR 535 TRP 536 LEU 537 ALA 538 PRO 539 VAL 540 GLN 541 VAL 542 VAL 543 ILE 544 MET 545 ASN 546 ILE 547 THR 548 ASP 549 SER 550 GLN 551 SER 552 GLU 553 TYR 554 VAL 555 ASN 556 GLU 557 LEU 558 THR 559 GLN 560 LYS 561 LEU 562 SER 563 ASN 564 ALA 565 GLY 566 ILE 567 ARG 568 VAL 569 LYS 570 ALA 571 ASP 572 LEU 573 ARG 574 ASN 575 GLU 576 LYS 577 ILE 578 GLY 579 PHE 580 LYS 581 ILE 582 ARG 583 GLU 584 HIS 585 THR 586 LEU 587 ARG 588 ARG 589 VAL 590 PRO 591 TYR 592 MET 593 LEU 594 VAL 595 CYS 596 GLY 597 ASP 598 LYS 599 GLU 600 VAL 601 GLU 602 SER 603 GLY 604 LYS 605 VAL 606 ALA 607 VAL 608 ARG 609 THR 610 ARG 611 ARG 612 GLY 613 LYS 614 ASP 615 LEU 616 GLY 617 SER 618 MET 619 ASP 620 VAL 621 ASN 622 GLU 623 VAL 624 ILE 625 GLU 626 LYS 627 LEU 628 GLN 629 GLN 630 GLU 631 ILE 632 ARG 633 SER 634 ARG 635 SER 636 LEU 637 LYS 638 GLN 639 LEU 640 GLU 641 GLU 642

Unit 2

ARG 242 ASP 243 HIS 244 ARG 245 LYS 246 ILE 247 GLY 248 LYS 249 GLN 250 LEU 251 ASP 252 LEU 253 TYR 254 HIS 255 MET 256 GLN 257 GLU 258 GLU 259 ALA 260 PRO 261 GLY 262 MET 263 VAL 264 PHE 265 TRP 266 HIS 267 ASN 268 ASP 269 GLY 270 TRP 271 THR 272 ILE 273 PHE 274 ARG 275 GLU 276 LEU 277 GLU 278 VAL 279 PHE 280 VAL 281 ARG 282 SER 283 LYS 284 LEU 285 LYS 286 GLU 287 TYR 288 GLN 289 TYR 290 GLN 291 GLU 292 VAL 293 LYS 294 GLY 295 PRO 296 PHE 297 MET 298 MET 299 ASP 300 ARG 301 VAL 302 LEU 303 TRP 304 GLU 305 LYS 306 THR 307 GLY 308 HIS 309 TRP 310 ASP 311 ASN 312 TYR 313 LYS 314 ASP 315 ALA 316 MET 317 PHE 318 THR 319 THR 320 SER 321 SER 322 GLU 323 ASN 324 ARG 325 GLU 326 TYR 327 CYS 328 ILE 329 LYS 330 PRO 331 MET 332 ASN 333 CYS 334 PRO 335 GLY 336 HIS 337 VAL 338 GLN 339 ILE 340 PHE 341 ASN 342 GLN 343 GLY 344 LEU 345 LYS 346 SER 347 TYR 348 ARG 349 ASP 350 LEU 351 PRO 352 LEU 353 ARG 354 MET 355 ALA 356 GLU 357 PHE 358 GLY 359 SER 360 CYS 361 HIS 362 ARG 363 ASN 364 GLU 365 PRO 366 SER 367 GLY 368 SER 369 LEU 370 HIS 371 GLY 372 LEU 373 MET 374 ARG 375 VAL 376 ARG 377 GLY 378 PHE 379 THR 380 GLN 381 ASP 382 ASP 383 ALA 384 HIS 385 ILE 386 PHE 387 CYS 388 THR 389 GLU 390 GLU 391 GLN 392 ILE 393 ARG 394 ASP 395 GLU 396 VAL 397 ASN 398 GLY 399 CYS 400 ILE 401 ARG 402 LEU 403 VAL 404 TYR 405 ASP 406 MET 407 TYR 408 SER 409 THR 410 PHE 411 GLY 412 PHE 413 GLU 414 LYS 415 ILE 416 VAL 417 VAL 418 LYS 419 LEU 420 SER 421 THR 422 ARG 423 PRO 424 GLU 425 LYS 426 ARG 427 ILE 428 GLY 429 SER 430 ASP 431 GLU 432 MET 433 TRP 434 ASP 435 ARG 436 ALA 437 GLU 438 ALA 439 ASP 440 LEU 441 ALA 442 VAL 443 ALA 444 LEU 445 GLU 446 GLU 447 ASN 448 ASN 449 ILE 450 PRO 451 PHE 452 GLU 453 TYR 454 GLN 455 LEU 456 GLY 457 GLU 458 GLY 459 ALA 460 PHE 461 TYR 462 GLY 463 PRO 464 LYS 465 ILE 466 GLU 467 PHE 468 THR 469 LEU 470 TYR 471 ASP 472 CYS 473 LEU 474 ASP 475 ARG 476 ALA 477 TRP 478 GLN 479 CYS 480 GLY 481 THR 482 VAL 483 GLN 484 LEU 485 ASP 486 PHE 487 SER 488 LEU 489 PRO 490 SER 491 ARG 492 LEU 493 SER 494 ALA 495 SER 496 TYR 497 VAL 498 GLY 499 GLU 500 ASP 501 ASN 502 GLU 503 ARG 504 LYS 505 VAL 506 PRO 507 VAL 508 MET 509 ILE 510 HIS 511 ARG 512 ALA 513 ILE 514 LEU 515 GLY 516 SER 517 MET 518 GLU 519 ARG 520 PHE 521 ILE 522 GLY 523 ILE 524 LEU 525 THR 526 GLU 527 GLU 528 PHE 529 ALA 530 GLY 531 PHE 532 PHE 533 PRO 534 THR 535 TRP 536 LEU 537 ALA 538 PRO 539 VAL 540 GLN 541 VAL 542 VAL 543 ILE 544 MET 545 ASN 546 ILE 547 THR 548 ASP 549 SER 550 GLN 551 SER 552 GLU 553 TYR 554 VAL 555 ASN 556 GLU 557 LEU 558 THR 559 GLN 560 LYS 561 LEU 562 SER 563 ASN 564 ALA 565 GLY 566 ILE 567 ARG 568 VAL 569 LYS 570 ALA 571 ASP 572 LEU 573 ARG 574 ASN 575 GLU 576 LYS 577 ILE 578 GLY 579 PHE 580 LYS 581 ILE 582 ARG 583 GLU 584 HIS 585 THR 586 LEU 587 ARG 588 ARG 589 VAL 590 PRO 591 TYR 592 MET 593 LEU 594 VAL 595 CYS 596 GLY 597 ASP 598 LYS 599 GLU 600 VAL 601 GLU 602 SER 603 GLY 604 LYS 605 VAL 606 ALA 607 VAL 608 ARG 609 THR 610 ARG 611 ARG 612 GLY 613 LYS 614 ASP 615 LEU 616 GLY 617 SER 618 MET 619 ASP 620 VAL 621 ASN 622 GLU 623 VAL 624 ILE 625 GLU 626 LYS 627 LEU 628 GLN 629 GLN 630 GLU 631 ILE 632 ARG 633 SER 634 ARG 635 SER 636 LEU 637 LYS 638 GLN 639 LEU 640 GLU 641 GLU 642

Ligands

Unit 3	ZN 650 SSA 1001
Unit 4	ZN 650 SSA 2001