1FVD - Sequence, Chains, Asymmetric and Biological Units

• Title: X-RAY STRUCTURES OF THE ANTIGEN-BINDING DOMAINS FROM THREE V HUMANIZED ANTI-P185-HER2 ANTIBODY 4D5 AND COMPARISON WITH M MODELING
• Keywords: IMMUNOGLOBULIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1FVD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	IGG1-KAPPA 4D5 FAB (LIGHT CHAIN)	A	214	1647	0
2	Protein	IGG1-KAPPA 4D5 FAB (HEAVY CHAIN)	B	223	1669	0
3	Protein	IGG1-KAPPA 4D5 FAB (LIGHT CHAIN)	C	214	1647	0
4	Protein	IGG1-KAPPA 4D5 FAB (HEAVY CHAIN)	D	223	1669	0
5	Water			199	0	199
total				1073	6632	199

Proteins

Unit 1	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 ASP 28 VAL 29 ASN 30 THR 31 ALA 32 VAL 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 SER 50 ALA 51 SER 52 PHE 53 LEU 54 GLU 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 ARG 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 THR 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 HIS 91 TYR 92 THR 93 THR 94 PRO 95 PRO 96 THR 97 PHE 98 GLY 99 GLN 100 GLY 101 THR 102 LYS 103 VAL 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 GLY 212 GLU 213 CYS 214
Unit 2	GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 ASN 28 ILE 29 LYS 30 ASP 31 THR 32 TYR 33 ILE 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 ARG 50 ILE 51 TYR 52 PRO 53 THR 54 ASN 55 GLY 56 TYR 57 THR 58 ARG 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ALA 72 ASP 73 THR 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 ALA 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 SER 97 ARG 98 TRP 99 GLY 100 GLY 101 ASP 102 GLY 103 PHE 104 TYR 105 ALA 106 MET 107 ASP 108 VAL 109 TRP 110 GLY 111 GLN 112 GLY 113 THR 114 LEU 115 VAL 116 THR 117 VAL 118 SER 119 SER 120 ALA 121 SER 122 THR 123 LYS 124 GLY 125 PRO 126 SER 127 VAL 128 PHE 129 PRO 130 LEU 131 ALA 132 PRO 133 SER 134 SER 135 LYS 136 SER 137 THR 138 SER 139 GLY 140 GLY 141 THR 142 ALA 143 ALA 144 LEU 145 GLY 146 CYS 147 LEU 148 VAL 149 LYS 150 ASP 151 TYR 152 PHE 153 PRO 154 GLU 155 PRO 156 VAL 157 THR 158 VAL 159 SER 160 TRP 161 ASN 162 SER 163 GLY 164 ALA 165 LEU 166 THR 167 SER 168 GLY 169 VAL 170 HIS 171 THR 172 PHE 173 PRO 174 ALA 175 VAL 176 LEU 177 GLN 178 SER 179 SER 180 GLY 181 LEU 182 TYR 183 SER 184 LEU 185 SER 186 SER 187 VAL 188 VAL 189 THR 190 VAL 191 PRO 192 SER 193 SER 194 SER 195 LEU 196 GLY 197 THR 198 GLN 199 THR 200 TYR 201 ILE 202 CYS 203 ASN 204 VAL 205 ASN 206 HIS 207 LYS 208 PRO 209 SER 210 ASN 211 THR 212 LYS 213 VAL 214 ASP 215 LYS 216 LYS 217 VAL 218 GLU 219 PRO 220 LYS 221 SER 222 CYS 223
Unit 3	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 ASP 28 VAL 29 ASN 30 THR 31 ALA 32 VAL 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 SER 50 ALA 51 SER 52 PHE 53 LEU 54 GLU 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 ARG 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 THR 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 HIS 91 TYR 92 THR 93 THR 94 PRO 95 PRO 96 THR 97 PHE 98 GLY 99 GLN 100 GLY 101 THR 102 LYS 103 VAL 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 GLY 212 GLU 213 CYS 214
Unit 4	GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 ASN 28 ILE 29 LYS 30 ASP 31 THR 32 TYR 33 ILE 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 ARG 50 ILE 51 TYR 52 PRO 53 THR 54 ASN 55 GLY 56 TYR 57 THR 58 ARG 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ALA 72 ASP 73 THR 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 ALA 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 SER 97 ARG 98 TRP 99 GLY 100 GLY 101 ASP 102 GLY 103 PHE 104 TYR 105 ALA 106 MET 107 ASP 108 VAL 109 TRP 110 GLY 111 GLN 112 GLY 113 THR 114 LEU 115 VAL 116 THR 117 VAL 118 SER 119 SER 120 ALA 121 SER 122 THR 123 LYS 124 GLY 125 PRO 126 SER 127 VAL 128 PHE 129 PRO 130 LEU 131 ALA 132 PRO 133 SER 134 SER 135 LYS 136 SER 137 THR 138 SER 139 GLY 140 GLY 141 THR 142 ALA 143 ALA 144 LEU 145 GLY 146 CYS 147 LEU 148 VAL 149 LYS 150 ASP 151 TYR 152 PHE 153 PRO 154 GLU 155 PRO 156 VAL 157 THR 158 VAL 159 SER 160 TRP 161 ASN 162 SER 163 GLY 164 ALA 165 LEU 166 THR 167 SER 168 GLY 169 VAL 170 HIS 171 THR 172 PHE 173 PRO 174 ALA 175 VAL 176 LEU 177 GLN 178 SER 179 SER 180 GLY 181 LEU 182 TYR 183 SER 184 LEU 185 SER 186 SER 187 VAL 188 VAL 189 THR 190 VAL 191 PRO 192 SER 193 SER 194 SER 195 LEU 196 GLY 197 THR 198 GLN 199 THR 200 TYR 201 ILE 202 CYS 203 ASN 204 VAL 205 ASN 206 HIS 207 LYS 208 PRO 209 SER 210 ASN 211 THR 212 LYS 213 VAL 214 ASP 215 LYS 216 LYS 217 VAL 218 GLU 219 PRO 220 LYS 221 SER 222 CYS 223